# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_61 - 231 OB_NTP_bind PF07717.11 114 0.00056 12.7 0.0 1 1 7.8e-06 0.0008 12.2 0.0 24 83 28 97 16 158 0.79 # 52214 # 52906 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_8 - 228 UPF0020 PF01170.13 180 1.4e-05 17.7 0.0 1 2 0.00031 0.032 6.7 0.0 103 119 17 33 4 88 0.73 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_8 - 228 UPF0020 PF01170.13 180 1.4e-05 17.7 0.0 2 2 6.2e-05 0.0063 9.0 0.0 28 54 163 189 158 221 0.67 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_86 - 730 Rad17 PF03215.10 519 3.3e-05 15.6 0.0 1 1 5.7e-07 5.9e-05 14.8 0.0 35 72 515 552 505 604 0.80 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_16 - 215 MipZ PF09140.6 261 2.4e-08 26.2 2.3 1 2 0.0008 0.083 4.8 0.5 7 25 8 26 2 38 0.71 # 9872 # 10516 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_16 - 215 MipZ PF09140.6 261 2.4e-08 26.2 2.3 2 2 9e-09 9.3e-07 21.1 0.1 70 133 45 108 25 125 0.84 # 9872 # 10516 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_103 - 176 SSB PF00436.20 104 6.2e-41 131.5 0.3 1 1 7.9e-43 8.1e-41 131.1 0.3 1 101 6 109 6 112 0.96 # 92163 # 92690 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_56 - 383 DUF87 PF01935.12 229 0.00063 12.5 0.0 1 1 1.1e-05 0.0012 11.7 0.0 28 56 162 191 161 192 0.88 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_22 - 519 AAA_22 PF13401.1 131 2.6e-07 23.8 0.1 1 2 0.00036 0.0092 9.1 0.0 6 27 38 59 34 89 0.85 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 AAA_22 PF13401.1 131 2.6e-07 23.8 0.1 2 2 4.6e-05 0.0012 12.0 0.1 69 121 209 265 165 275 0.77 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_86 - 730 AAA_22 PF13401.1 131 4.9e-06 19.7 0.1 1 2 4.5e-05 0.0012 12.0 0.1 5 24 526 545 524 568 0.90 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_86 - 730 AAA_22 PF13401.1 131 4.9e-06 19.7 0.1 2 2 0.0077 0.2 4.8 0.0 56 122 626 688 621 693 0.67 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_56 - 383 AAA_22 PF13401.1 131 1e-05 18.6 0.0 1 1 9.8e-07 2.5e-05 17.4 0.0 4 46 157 196 152 233 0.76 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_45 - 518 AAA_22 PF13401.1 131 0.0003 13.9 0.0 1 1 2.6e-05 0.00067 12.8 0.0 6 28 227 249 222 330 0.78 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_56 - 383 ATP_bind_1 PF03029.12 238 4.8e-05 15.9 0.0 1 1 7.2e-07 7.4e-05 15.3 0.0 1 23 162 184 162 197 0.86 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_22 - 519 MutS_V PF00488.16 235 3.9e-05 16.0 1.2 1 2 3e-05 0.0031 9.9 0.1 37 67 32 60 5 64 0.78 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 MutS_V PF00488.16 235 3.9e-05 16.0 1.2 2 2 0.0013 0.14 4.4 0.1 117 177 222 281 209 301 0.71 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 AAA_15 PF13175.1 415 4.8e-14 45.1 19.4 1 2 4.8e-09 5e-07 22.0 5.1 2 91 15 146 14 177 0.63 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 AAA_15 PF13175.1 415 4.8e-14 45.1 19.4 2 2 3.4e-10 3.5e-08 25.8 10.5 285 410 148 268 137 272 0.75 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_8 - 228 N6_N4_Mtase PF01555.13 231 5.7e-37 120.3 0.0 1 2 1e-15 1.1e-13 44.2 0.0 1 114 21 124 21 137 0.89 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_8 - 228 N6_N4_Mtase PF01555.13 231 5.7e-37 120.3 0.0 2 2 5.4e-25 5.6e-23 74.5 0.0 169 228 141 200 126 203 0.90 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_56 - 383 AAA_17 PF13207.1 121 1.9e-05 18.4 0.1 1 1 9.4e-06 0.00024 14.9 0.0 3 47 161 208 161 251 0.76 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_45 - 518 AAA_17 PF13207.1 121 2.9e-05 17.8 0.1 1 1 4.5e-06 0.00012 15.9 0.0 1 23 227 249 227 342 0.74 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_86 - 730 AAA_17 PF13207.1 121 4.5e-05 17.2 0.0 1 1 5.4e-06 0.00014 15.6 0.0 1 31 527 567 527 615 0.72 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_22 - 519 AAA_17 PF13207.1 121 0.00029 14.6 0.0 1 1 8.2e-05 0.0021 11.8 0.0 3 25 40 66 39 122 0.84 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 AAA_21 PF13304.1 303 6.4e-23 75.0 11.2 1 1 3.1e-23 1.6e-21 70.4 8.0 1 297 38 268 38 272 0.64 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_86 - 730 AAA_21 PF13304.1 303 3e-08 26.8 0.7 1 2 1e-05 0.00053 12.9 0.1 2 62 528 594 527 603 0.69 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_86 - 730 AAA_21 PF13304.1 303 3e-08 26.8 0.7 2 2 2.7e-05 0.0014 11.5 0.0 237 284 636 680 629 694 0.88 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_56 - 383 MobB PF03205.9 140 1.9e-05 17.3 0.0 1 2 0.017 1.7 1.3 0.0 14 60 61 108 61 127 0.88 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_56 - 383 MobB PF03205.9 140 1.9e-05 17.3 0.0 2 2 3.1e-06 0.00032 13.4 0.0 5 26 162 183 160 193 0.90 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_45 - 518 T2SE PF00437.15 272 1.1e-41 135.4 0.1 1 1 5.4e-43 2.8e-41 134.1 0.0 10 271 97 373 90 374 0.85 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_56 - 383 T2SE PF00437.15 272 8.3e-36 116.2 0.0 1 1 2.4e-37 1.2e-35 115.6 0.0 120 269 149 306 127 309 0.88 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_45 - 518 G-alpha PF00503.15 389 0.00071 11.2 0.0 1 2 0.069 7.1 -2.0 0.0 234 272 70 113 51 117 0.81 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_45 - 518 G-alpha PF00503.15 389 0.00071 11.2 0.0 2 2 1.9e-05 0.002 9.7 0.0 58 87 225 254 214 312 0.83 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_22 - 519 SMC_N PF02463.14 220 2.7e-15 49.1 3.0 1 2 6.5e-10 3.4e-08 25.9 0.1 2 45 14 57 13 62 0.92 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 SMC_N PF02463.14 220 2.7e-15 49.1 3.0 2 2 3.8e-09 2e-07 23.4 0.4 135 208 181 279 132 289 0.68 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_86 - 730 SMC_N PF02463.14 220 1e-08 27.6 0.1 1 2 0.00065 0.034 6.3 0.0 19 44 520 545 511 558 0.81 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_86 - 730 SMC_N PF02463.14 220 1e-08 27.6 0.1 2 2 8.7e-08 4.5e-06 19.0 0.0 137 209 636 702 567 709 0.90 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_16 - 215 VirC1 PF07015.6 231 0.00042 12.4 0.0 1 2 0.00073 0.075 5.0 0.0 3 29 3 29 1 36 0.81 # 9872 # 10516 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_16 - 215 VirC1 PF07015.6 231 0.00042 12.4 0.0 2 2 0.00052 0.053 5.5 0.0 87 190 77 181 59 194 0.70 # 9872 # 10516 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_22 - 519 Arch_ATPase PF01637.13 234 5.4e-07 22.4 0.6 1 2 8.4e-06 0.00087 11.9 0.0 7 42 24 58 19 115 0.89 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 Arch_ATPase PF01637.13 234 5.4e-07 22.4 0.6 2 2 0.00012 0.012 8.2 0.5 103 163 212 267 137 284 0.82 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_86 - 730 AAA_16 PF13191.1 185 4.8e-05 16.3 1.0 1 1 8.4e-06 0.00022 14.2 1.0 24 51 525 552 517 688 0.68 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_45 - 518 AAA_16 PF13191.1 185 7.5e-05 15.7 0.0 1 1 9.1e-06 0.00024 14.1 0.0 8 52 213 254 212 330 0.81 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_22 - 519 AAA_16 PF13191.1 185 0.00024 14.0 0.1 1 2 0.00015 0.0038 10.1 0.0 27 46 39 58 34 67 0.86 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 AAA_16 PF13191.1 185 0.00024 14.0 0.1 2 2 0.08 2 1.2 0.0 138 166 215 243 183 266 0.72 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_56 - 383 AAA_16 PF13191.1 185 0.0003 13.7 0.0 1 1 2.5e-05 0.00063 12.7 0.0 27 52 160 188 148 282 0.82 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_22 - 519 AAA_23 PF13476.1 202 1.6e-12 41.1 1.0 1 1 1.6e-13 4e-12 39.8 1.0 1 177 16 236 16 411 0.71 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_45 - 518 AAA_23 PF13476.1 202 0.00018 14.8 0.1 1 1 2.2e-05 0.00056 13.2 0.0 20 38 226 244 209 249 0.86 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_56 - 383 AAA_23 PF13476.1 202 0.00023 14.5 0.0 1 1 1.5e-05 0.00038 13.8 0.0 19 40 157 178 142 209 0.83 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_86 - 730 AAA_23 PF13476.1 202 0.00053 13.3 0.0 1 1 3.4e-05 0.00087 12.6 0.0 20 53 526 559 502 613 0.79 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_56 - 383 AAA_18 PF13238.1 129 1.6e-05 18.2 0.0 1 1 6e-07 3.1e-05 17.3 0.0 2 42 161 197 161 230 0.83 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_45 - 518 AAA_18 PF13238.1 129 0.00035 13.8 0.0 1 1 2.2e-05 0.0011 12.2 0.0 1 18 228 245 228 312 0.86 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_16 - 215 CbiA PF01656.18 195 1.3e-09 30.7 0.1 1 1 1.8e-11 1.8e-09 30.2 0.1 1 145 4 124 4 173 0.79 # 9872 # 10516 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.428 1_22 - 519 AAA_14 PF13173.1 128 2.5e-06 20.4 0.1 1 2 0.00035 0.018 7.9 0.0 5 27 39 61 36 79 0.84 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 AAA_14 PF13173.1 128 2.5e-06 20.4 0.1 2 2 0.00016 0.0083 9.0 0.2 50 102 218 273 172 298 0.60 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_86 - 730 AAA_14 PF13173.1 128 0.0003 13.6 0.0 1 1 1.9e-05 0.00098 12.0 0.0 3 76 526 605 524 621 0.59 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_22 - 519 AAA_29 PF13555.1 62 1.6e-09 30.2 0.0 1 1 2e-10 5.2e-09 28.5 0.0 15 51 29 64 14 67 0.82 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_86 - 730 AAA_29 PF13555.1 62 2.4e-05 16.8 0.1 1 1 2.6e-06 6.8e-05 15.4 0.1 23 49 525 551 515 559 0.75 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_45 - 518 AAA_29 PF13555.1 62 2.7e-05 16.6 0.0 1 1 2.1e-06 5.5e-05 15.6 0.0 21 40 224 242 216 254 0.83 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_56 - 383 AAA_29 PF13555.1 62 4e-05 16.1 0.0 1 1 4.6e-06 0.00012 14.6 0.0 26 44 160 178 151 186 0.83 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_22 - 519 AAA PF00004.24 132 3.3e-07 23.5 0.2 1 2 0.00026 0.013 8.6 0.0 3 21 41 59 39 105 0.80 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 AAA PF00004.24 132 3.3e-07 23.5 0.2 2 2 2.3e-05 0.0012 12.0 0.3 39 115 208 275 174 288 0.78 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_45 - 518 AAA PF00004.24 132 0.00057 13.1 0.0 1 2 0.00066 0.034 7.3 0.0 1 21 228 248 228 277 0.83 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_45 - 518 AAA PF00004.24 132 0.00057 13.1 0.0 2 2 0.068 3.5 0.8 0.0 9 66 442 508 436 515 0.62 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_86 - 730 DUF258 PF03193.11 161 5.6e-05 15.3 0.0 1 1 1e-06 0.0001 14.5 0.0 34 65 524 555 500 580 0.82 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_81 - 764 TraG-D_C PF12696.2 128 5.9e-07 22.4 0.1 1 1 1.2e-08 1.3e-06 21.3 0.1 1 88 437 524 437 553 0.83 # 70998 # 73289 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_22 - 519 NTPase_1 PF03266.10 168 5.4e-05 15.9 0.5 1 2 0.0008 0.041 6.5 0.0 4 22 41 59 39 72 0.82 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 NTPase_1 PF03266.10 168 5.4e-05 15.9 0.5 2 2 0.00066 0.034 6.8 0.3 86 148 219 283 191 296 0.80 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_86 - 730 NTPase_1 PF03266.10 168 0.00059 12.5 0.1 1 1 2.6e-05 0.0013 11.4 0.1 2 22 528 548 527 580 0.82 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_8 - 228 Methyltransf_26 PF13659.1 117 9.3e-12 38.0 0.1 1 2 2.1e-07 2.2e-05 17.5 0.0 57 114 7 71 2 74 0.69 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_8 - 228 Methyltransf_26 PF13659.1 117 9.3e-12 38.0 0.1 2 2 9.7e-08 9.9e-06 18.6 0.0 4 45 167 207 164 223 0.82 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_45 - 518 AAA_30 PF13604.1 196 0.00018 14.0 0.0 1 1 6.4e-06 0.00033 13.2 0.0 4 44 211 251 209 280 0.86 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_22 - 519 AAA_30 PF13604.1 196 0.00051 12.6 0.0 1 1 2.5e-05 0.0013 11.2 0.0 12 44 30 62 26 76 0.85 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_53 - 195 DNA_pol3_delta PF06144.8 172 2.1e-06 20.3 0.0 1 1 3e-08 3.1e-06 19.7 0.0 35 99 92 152 74 179 0.80 # 43745 # 44329 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.405 1_22 - 519 FtsK_SpoIIIE PF01580.13 205 0.00028 13.3 0.0 1 1 5.3e-06 0.00055 12.4 0.0 36 58 34 56 15 62 0.82 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_86 - 730 ABC_tran PF00005.22 137 2.7e-32 104.9 0.0 1 1 2e-33 5.3e-32 103.9 0.0 1 137 515 664 515 664 0.86 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_22 - 519 ABC_tran PF00005.22 137 1.8e-11 37.4 0.4 1 1 1.8e-11 4.5e-10 32.9 0.4 8 134 33 235 29 237 0.56 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_45 - 518 ABC_tran PF00005.22 137 8.7e-05 15.8 0.0 1 1 8.7e-06 0.00022 14.5 0.0 12 40 226 255 216 298 0.81 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_56 - 383 ABC_tran PF00005.22 137 0.00012 15.4 0.0 1 1 8.6e-06 0.00022 14.5 0.0 16 35 162 181 152 211 0.87 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_8 - 228 Cons_hypoth95 PF03602.10 183 1.4e-05 17.5 0.0 1 2 0.00043 0.044 6.1 0.0 112 146 18 54 9 81 0.65 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_8 - 228 Cons_hypoth95 PF03602.10 183 1.4e-05 17.5 0.0 2 2 4e-05 0.0041 9.4 0.0 41 62 162 183 145 218 0.78 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_45 - 518 DAP3 PF10236.4 309 0.00065 11.6 0.0 1 1 1.2e-05 0.0012 10.7 0.0 21 42 223 244 214 253 0.86 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_22 - 519 AAA_19 PF13245.1 76 1.2e-05 18.0 0.0 1 1 6.1e-07 3.1e-05 16.7 0.0 9 37 35 62 30 73 0.85 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_45 - 518 AAA_19 PF13245.1 76 0.0001 15.0 0.0 1 1 5.3e-06 0.00027 13.6 0.0 10 46 226 259 218 270 0.79 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_69 - 1015 AAA_10 PF12846.2 304 1.2e-30 99.9 0.0 1 1 1.6e-31 2.7e-30 98.7 0.0 8 302 502 897 498 898 0.89 # 58004 # 61048 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.508 1_81 - 764 AAA_10 PF12846.2 304 2.7e-05 16.6 1.0 1 1 4.7e-06 8.1e-05 15.1 1.0 2 287 137 501 136 514 0.62 # 70998 # 73289 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_86 - 730 AAA_10 PF12846.2 304 4.9e-05 15.8 0.0 1 2 5.1e-05 0.00088 11.7 0.0 4 22 528 546 526 572 0.88 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_86 - 730 AAA_10 PF12846.2 304 4.9e-05 15.8 0.0 2 2 0.066 1.1 1.5 0.0 218 276 651 709 601 715 0.80 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_22 - 519 AAA_10 PF12846.2 304 0.00013 14.3 0.1 1 2 0.00011 0.0019 10.6 0.0 3 22 38 57 36 67 0.86 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 AAA_10 PF12846.2 304 0.00013 14.3 0.1 2 2 0.087 1.5 1.0 0.0 212 261 222 268 202 273 0.80 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_45 - 518 AAA_10 PF12846.2 304 0.00023 13.6 0.0 1 1 2.5e-05 0.00044 12.7 0.0 4 30 228 256 226 304 0.78 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_56 - 383 AAA_10 PF12846.2 304 0.00053 12.4 0.0 1 1 6e-05 0.001 11.4 0.0 2 21 158 177 157 196 0.83 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_86 - 730 SbcCD_C PF13558.1 90 6.3e-05 15.8 0.2 1 1 5.4e-06 0.00056 12.8 0.1 20 86 623 676 606 680 0.75 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_91 - 283 Methyltransf_27 PF13708.1 194 2.1e-66 216.0 0.0 1 1 2.7e-68 2.8e-66 215.7 0.0 2 194 85 278 84 278 0.96 # 82599 # 83447 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_81 - 764 TrwB_AAD_bind PF10412.4 386 2.5e-06 19.2 0.2 1 2 9.3e-05 0.0096 7.4 0.0 11 32 132 153 126 157 0.84 # 70998 # 73289 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_81 - 764 TrwB_AAD_bind PF10412.4 386 2.5e-06 19.2 0.2 2 2 3.1e-05 0.0032 9.0 0.1 247 332 440 525 427 542 0.88 # 70998 # 73289 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_8 - 228 MethyltransfD12 PF02086.10 260 0.00042 12.7 0.0 1 2 0.014 1.5 1.1 0.0 175 188 18 31 8 93 0.80 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_8 - 228 MethyltransfD12 PF02086.10 260 0.00042 12.7 0.0 2 2 4e-05 0.0041 9.5 0.0 20 46 163 189 148 197 0.78 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_56 - 383 RNA_helicase PF00910.17 107 9.9e-05 15.5 0.0 1 1 1.9e-06 0.0002 14.5 0.0 2 28 161 187 160 205 0.83 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_22 - 519 AAA_24 PF13479.1 213 0.0011 11.5 0.9 1 3 0.0028 0.28 3.6 0.0 6 21 39 54 36 59 0.86 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 AAA_24 PF13479.1 213 0.0011 11.5 0.9 2 3 0.029 3 0.3 0.0 103 143 105 147 95 191 0.73 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 AAA_24 PF13479.1 213 0.0011 11.5 0.9 3 3 0.0023 0.23 3.9 0.1 114 156 247 291 238 307 0.74 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 NACHT PF05729.7 166 2.3e-06 20.3 0.0 1 2 3.6e-06 0.00037 13.1 0.0 3 41 39 78 37 92 0.80 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_22 - 519 NACHT PF05729.7 166 2.3e-06 20.3 0.0 2 2 0.0013 0.13 4.8 0.0 72 109 218 249 177 293 0.72 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_56 - 383 AAA_25 PF13481.1 194 0.0002 13.7 0.0 1 1 1.4e-05 0.00036 12.9 0.0 24 58 148 182 124 207 0.78 # 45994 # 47142 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.512 1_22 - 519 AAA_25 PF13481.1 194 0.00024 13.5 0.0 1 1 2.1e-05 0.00055 12.3 0.0 30 58 33 61 22 84 0.80 # 14217 # 15773 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_45 - 518 AAA_25 PF13481.1 194 0.0003 13.2 0.0 1 2 0.00015 0.0038 9.5 0.0 19 65 211 260 200 270 0.72 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_45 - 518 AAA_25 PF13481.1 194 0.0003 13.2 0.0 2 2 0.092 2.4 0.4 0.0 153 190 297 337 292 340 0.73 # 35398 # 36951 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_86 - 730 AAA_25 PF13481.1 194 0.00031 13.1 0.0 1 1 3.9e-05 0.001 11.4 0.0 29 51 521 543 500 555 0.84 # 76065 # 78254 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.423 1_8 - 228 Methyltransf_15 PF09445.5 164 0.00082 11.9 0.0 1 2 0.045 4.6 -0.3 0.0 53 79 4 29 2 32 0.90 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 1_8 - 228 Methyltransf_15 PF09445.5 164 0.00082 11.9 0.0 2 2 4.2e-05 0.0044 9.5 0.0 3 31 166 194 164 209 0.86 # 3329 # 4012 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/ad92ee05-196a-40fc-a39f-4908f4e66e5b # Target file: checkm_output/bins/pm199/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm199/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ad92ee05-196a-40fc-a39f-4908f4e66e5b checkm_output/bins/pm199/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:02:30 2020 # [ok]