# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 10_5 - 246 Methyltransf_32 PF13679.1 141 2.4e-05 17.9 0.0 1 1 1.9e-07 3.7e-05 17.3 0.0 12 70 17 68 9 121 0.82 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_19 - 188 Methyltransf_12 PF08242.7 99 2.2e-05 18.8 0.0 1 1 2e-07 3.9e-05 18.0 0.0 1 99 55 144 55 144 0.86 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 12_3 - 181 cobW PF02492.14 178 0.0015 11.9 0.0 1 1 1.3e-05 0.0025 11.1 0.0 2 21 2 21 1 29 0.81 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 10_5 - 246 RrnaAD PF00398.15 262 5.8e-74 242.2 6.7 1 1 6.6e-76 6.4e-74 242.1 6.7 3 261 2 242 1 243 0.96 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_19 - 188 RrnaAD PF00398.15 262 6.7e-09 28.9 0.0 1 1 8.8e-11 8.6e-09 28.6 0.0 9 113 29 128 24 148 0.89 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 8_6 - 292 Seryl_tRNA_N PF02403.17 108 0.018 9.0 13.5 1 4 0.02 3.9 1.4 0.1 57 104 11 59 2 63 0.69 # 5500 # 6375 # 1 # ID=8_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 8_6 - 292 Seryl_tRNA_N PF02403.17 108 0.018 9.0 13.5 2 4 0.0053 1 3.3 0.8 39 96 39 107 17 111 0.52 # 5500 # 6375 # 1 # ID=8_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 8_6 - 292 Seryl_tRNA_N PF02403.17 108 0.018 9.0 13.5 3 4 0.00048 0.095 6.6 0.1 27 59 90 122 75 144 0.84 # 5500 # 6375 # 1 # ID=8_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 8_6 - 292 Seryl_tRNA_N PF02403.17 108 0.018 9.0 13.5 4 4 0.00026 0.051 7.5 1.6 17 107 162 251 155 252 0.76 # 5500 # 6375 # 1 # ID=8_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 3_5 - 389 MipZ PF09140.6 261 8.4e-06 18.8 0.4 1 2 3.5e-06 0.00069 12.6 0.0 2 47 108 153 107 157 0.87 # 3334 # 4500 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 3_5 - 389 MipZ PF09140.6 261 8.4e-06 18.8 0.4 2 2 0.0011 0.22 4.4 0.0 88 134 224 270 197 292 0.84 # 3334 # 4500 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 3_22 - 176 SSB PF00436.20 104 1.8e-40 130.9 0.3 1 1 1.1e-42 2.2e-40 130.6 0.3 1 101 6 109 6 112 0.95 # 15234 # 15761 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.585 3_19 - 188 Methyltransf_18 PF12847.2 112 5.8e-10 33.6 0.0 1 1 1.3e-11 1.2e-09 32.6 0.0 4 109 53 146 50 148 0.89 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 10_5 - 246 Methyltransf_18 PF12847.2 112 2.6e-09 31.5 0.0 1 1 3.9e-11 3.8e-09 31.0 0.0 2 74 30 98 29 153 0.87 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_4 - 1707 UvrD_C_2 PF13538.1 104 2.8e-07 24.6 0.7 1 2 0.012 2.4 2.2 0.0 6 44 1227 1265 1223 1295 0.74 # 2140 # 7260 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_4 - 1707 UvrD_C_2 PF13538.1 104 2.8e-07 24.6 0.7 2 2 5e-08 9.8e-06 19.6 0.2 3 102 1341 1444 1339 1446 0.77 # 2140 # 7260 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_23 - 876 DUF87 PF01935.12 229 2.2e-07 24.7 0.0 1 1 3.3e-09 6.4e-07 23.2 0.0 26 222 482 669 468 676 0.77 # 22825 # 25452 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 4_12 - 1588 NB-ARC PF00931.17 287 1.4e-05 17.9 0.4 1 1 3.5e-07 6.8e-05 15.6 0.4 9 50 216 254 209 349 0.71 # 8815 # 13578 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_35 - 519 AAA_22 PF13401.1 131 4.9e-07 23.8 0.1 1 2 0.00027 0.017 9.1 0.0 6 27 38 59 34 89 0.85 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 AAA_22 PF13401.1 131 4.9e-07 23.8 0.1 2 2 3.4e-05 0.0022 12.0 0.1 69 121 209 265 165 275 0.77 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 4_12 - 1588 AAA_22 PF13401.1 131 1.9e-05 18.7 0.3 1 1 2.4e-06 0.00015 15.7 0.3 3 98 225 300 220 335 0.68 # 8815 # 13578 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 12_3 - 181 AAA_22 PF13401.1 131 3e-05 18.0 0.0 1 1 1.4e-06 9.2e-05 16.5 0.0 6 50 2 50 1 105 0.72 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 10_5 - 246 Methyltransf_11 PF08241.7 95 0.00012 16.5 0.0 1 1 1.2e-06 0.00023 15.5 0.0 2 59 35 92 34 100 0.85 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_35 - 519 MutS_V PF00488.16 235 7.2e-05 16.1 1.2 1 2 3e-05 0.0059 9.9 0.1 37 67 32 60 5 64 0.78 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 MutS_V PF00488.16 235 7.2e-05 16.1 1.2 2 2 0.0013 0.26 4.4 0.1 117 177 222 281 209 301 0.71 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 AAA_15 PF13175.1 415 6.4e-14 45.6 19.0 1 2 9.7e-09 9.5e-07 22.0 5.1 2 91 15 146 14 177 0.63 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 AAA_15 PF13175.1 415 6.4e-14 45.6 19.0 2 2 6.8e-10 6.6e-08 25.8 10.5 285 410 148 268 137 272 0.75 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_8 - 276 AAA_15 PF13175.1 415 3.9e-07 23.2 0.0 1 2 3e-05 0.0029 10.5 0.0 23 42 34 53 19 86 0.82 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 1_8 - 276 AAA_15 PF13175.1 415 3.9e-07 23.2 0.0 2 2 2.4e-05 0.0024 10.8 0.0 370 410 160 200 151 202 0.91 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 12_3 - 181 AAA_17 PF13207.1 121 4.7e-06 21.3 0.0 1 1 1.4e-07 9.4e-06 20.3 0.0 1 32 2 34 2 175 0.59 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_35 - 519 AAA_17 PF13207.1 121 0.00058 14.6 0.0 1 1 6.1e-05 0.004 11.8 0.0 3 25 40 66 39 122 0.84 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 2_5 - 727 AAA_17 PF13207.1 121 0.00065 14.4 0.0 1 1 2.4e-05 0.0016 13.2 0.0 3 28 189 218 187 336 0.74 # 7260 # 9440 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_35 - 519 AAA_21 PF13304.1 303 1.4e-22 74.8 11.6 1 1 3.1e-23 3e-21 70.4 8.0 1 297 38 268 38 272 0.64 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_8 - 276 AAA_21 PF13304.1 303 1.4e-17 58.4 0.0 1 2 2.6e-09 2.5e-07 24.7 0.0 1 25 35 63 35 100 0.77 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 1_8 - 276 AAA_21 PF13304.1 303 1.4e-17 58.4 0.0 2 2 1.7e-11 1.7e-09 31.9 0.0 232 298 138 201 107 203 0.84 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 4_12 - 1588 Miro PF08477.8 119 0.00034 15.0 0.1 1 1 5.6e-06 0.0011 13.3 0.1 2 44 229 270 227 302 0.73 # 8815 # 13578 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 2_23 - 876 MobB PF03205.9 140 0.0005 13.7 0.2 1 2 5.4e-05 0.0053 10.3 0.0 4 37 483 515 481 523 0.79 # 22825 # 25452 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_23 - 876 MobB PF03205.9 140 0.0005 13.7 0.2 2 2 0.069 6.7 0.3 0.0 25 64 695 732 690 744 0.86 # 22825 # 25452 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_5 - 727 MobB PF03205.9 140 0.0016 12.0 0.0 1 1 3.5e-05 0.0035 10.9 0.0 7 34 192 219 188 225 0.89 # 7260 # 9440 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 5_7 - 122 CTP_transf_2 PF01467.21 157 0.0015 12.4 0.0 1 1 8.5e-06 0.0017 12.3 0.0 32 67 7 41 2 98 0.65 # 4280 # 4645 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 3_5 - 389 ArsA_ATPase PF02374.10 305 3.4e-06 20.1 0.4 1 2 1.7e-06 0.00032 13.6 0.1 9 36 115 142 109 151 0.89 # 3334 # 4500 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 3_5 - 389 ArsA_ATPase PF02374.10 305 3.4e-06 20.1 0.4 2 2 0.0011 0.22 4.3 0.0 123 136 231 244 221 251 0.84 # 3334 # 4500 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 10_5 - 246 CMAS PF02353.15 273 0.00033 13.6 0.6 1 1 3e-06 0.00058 12.8 0.0 51 105 18 71 12 99 0.78 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 12_3 - 181 Cytidylate_kin2 PF13189.1 179 0.002 11.9 0.0 1 2 9.1e-05 0.018 8.8 0.0 1 22 2 23 2 44 0.81 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 12_3 - 181 Cytidylate_kin2 PF13189.1 179 0.002 11.9 0.0 2 2 0.026 5.2 0.8 0.0 110 135 96 122 94 136 0.74 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 12_3 - 181 Zeta_toxin PF06414.7 201 0.00016 14.7 0.0 1 2 4.2e-05 0.0041 10.1 0.0 19 50 3 32 1 39 0.78 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 12_3 - 181 Zeta_toxin PF06414.7 201 0.00016 14.7 0.0 2 2 0.009 0.88 2.4 0.0 94 123 73 102 57 160 0.77 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 4_12 - 1588 Zeta_toxin PF06414.7 201 0.0011 11.9 0.0 1 1 2.8e-05 0.0027 10.6 0.0 14 56 224 267 215 305 0.84 # 8815 # 13578 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_35 - 519 SMC_N PF02463.14 220 5.2e-15 49.1 3.0 1 2 6.5e-10 6.4e-08 25.9 0.1 2 45 14 57 13 62 0.92 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 SMC_N PF02463.14 220 5.2e-15 49.1 3.0 2 2 3.8e-09 3.7e-07 23.4 0.4 135 208 181 279 132 289 0.68 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_8 - 276 SMC_N PF02463.14 220 4.4e-08 26.4 0.2 1 1 1.1e-09 1.1e-07 25.1 0.2 25 198 34 201 22 218 0.75 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 3_5 - 389 VirC1 PF07015.6 231 0.00013 14.9 0.1 1 2 0.00028 0.055 6.3 0.0 4 42 109 147 107 154 0.91 # 3334 # 4500 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 3_5 - 389 VirC1 PF07015.6 231 0.00013 14.9 0.1 2 2 0.0003 0.059 6.2 0.1 84 139 235 290 222 312 0.77 # 3334 # 4500 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_35 - 519 Arch_ATPase PF01637.13 234 9.7e-07 22.5 0.6 1 2 1.7e-05 0.0017 11.9 0.0 7 42 24 58 19 115 0.89 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 Arch_ATPase PF01637.13 234 9.7e-07 22.5 0.6 2 2 0.00023 0.023 8.2 0.5 103 163 212 267 137 284 0.82 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 4_12 - 1588 Arch_ATPase PF01637.13 234 8.2e-06 19.5 3.0 1 1 9.6e-08 9.4e-06 19.3 0.3 3 83 211 306 210 354 0.66 # 8815 # 13578 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 2_5 - 727 AAA_16 PF13191.1 185 7e-06 20.0 0.0 1 1 8.7e-07 4.2e-05 17.4 0.0 21 60 182 222 179 263 0.81 # 7260 # 9440 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 4_12 - 1588 AAA_16 PF13191.1 185 0.0003 14.7 0.0 1 1 2.7e-05 0.0013 12.6 0.0 10 58 217 259 210 315 0.71 # 8815 # 13578 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_8 - 276 AAA_16 PF13191.1 185 0.00043 14.1 0.2 1 1 2.1e-05 0.001 12.9 0.0 12 63 23 74 16 92 0.72 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 1_35 - 519 AAA_16 PF13191.1 185 0.00046 14.0 0.1 1 2 0.00015 0.0073 10.1 0.0 27 46 39 58 34 67 0.86 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 AAA_16 PF13191.1 185 0.00046 14.0 0.1 2 2 0.08 3.9 1.2 0.0 138 166 215 243 183 266 0.72 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 AAA_23 PF13476.1 202 2e-12 41.7 0.6 1 1 5.5e-14 5.4e-12 40.3 0.5 1 177 16 236 16 403 0.70 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_8 - 276 AAA_23 PF13476.1 202 2.1e-05 18.7 0.2 1 1 3.8e-07 3.7e-05 17.9 0.2 21 40 35 54 22 64 0.86 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 12_3 - 181 AAA_18 PF13238.1 129 3.9e-09 30.8 0.0 1 1 7.8e-11 7.6e-09 29.8 0.0 1 126 3 134 3 137 0.76 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 4_12 - 1588 AAA_18 PF13238.1 129 0.00031 14.9 0.1 1 1 2.7e-05 0.0027 11.9 0.1 1 106 229 353 229 368 0.76 # 8815 # 13578 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_18 - 370 adh_short PF00106.20 167 0.0013 12.5 0.1 1 1 2.4e-05 0.0048 10.7 0.1 3 49 4 48 2 175 0.83 # 12901 # 14010 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.383 8_6 - 292 AAA_13 PF13166.1 712 0.0017 10.7 18.3 1 2 4.3e-05 0.0042 9.4 3.4 365 471 17 125 5 133 0.60 # 5500 # 6375 # 1 # ID=8_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 8_6 - 292 AAA_13 PF13166.1 712 0.0017 10.7 18.3 2 2 0.00021 0.021 7.1 7.2 322 439 158 285 138 291 0.75 # 5500 # 6375 # 1 # ID=8_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 1_8 - 276 AAA_13 PF13166.1 712 0.0023 10.2 0.1 1 2 0.0015 0.15 4.2 0.2 23 36 40 53 29 66 0.83 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 1_8 - 276 AAA_13 PF13166.1 712 0.0023 10.2 0.1 2 2 0.0021 0.21 3.8 0.0 529 572 162 203 152 210 0.90 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 3_5 - 389 CbiA PF01656.18 195 2e-36 119.1 0.0 1 1 1.3e-38 2.6e-36 118.7 0.0 2 194 110 339 109 340 0.80 # 3334 # 4500 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 3_19 - 188 Methyltransf_25 PF13649.1 101 0.00022 15.4 0.0 1 1 1.7e-06 0.00033 14.9 0.0 1 101 54 142 54 142 0.81 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_35 - 519 AAA_14 PF13173.1 128 4.6e-06 20.4 0.1 1 2 0.00035 0.034 7.9 0.0 5 27 39 61 36 79 0.84 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 AAA_14 PF13173.1 128 4.6e-06 20.4 0.1 2 2 0.00016 0.016 9.0 0.2 50 102 218 273 172 298 0.60 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 4_12 - 1588 AAA_14 PF13173.1 128 0.00057 13.7 0.2 1 1 5.8e-06 0.00057 13.7 0.2 2 101 226 333 225 340 0.72 # 8815 # 13578 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_35 - 519 AAA_29 PF13555.1 62 3e-09 30.2 0.0 1 1 1e-10 9.9e-09 28.5 0.0 15 51 29 64 14 67 0.82 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_8 - 276 AAA_29 PF13555.1 62 1.4e-06 21.6 0.2 1 1 3.4e-08 3.4e-06 20.4 0.2 18 44 29 54 14 63 0.83 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 1_35 - 519 AAA PF00004.24 132 6.4e-07 23.5 0.2 1 2 0.00026 0.026 8.6 0.0 3 21 41 59 39 105 0.80 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 AAA PF00004.24 132 6.4e-07 23.5 0.2 2 2 2.3e-05 0.0023 12.0 0.3 39 115 208 275 174 288 0.78 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 4_12 - 1588 AAA PF00004.24 132 0.00014 15.9 0.0 1 1 3.9e-06 0.00038 14.5 0.0 1 94 229 318 229 343 0.70 # 8815 # 13578 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_18 - 370 KR PF08659.5 181 0.0014 12.2 0.0 1 1 1.3e-05 0.0026 11.3 0.0 4 49 5 51 3 101 0.75 # 12901 # 14010 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.383 4_12 - 1588 Sigma54_activat PF00158.21 168 1.9e-05 18.0 0.0 1 1 2.1e-07 4.2e-05 16.9 0.0 11 83 215 286 209 307 0.81 # 8815 # 13578 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 10_5 - 246 PCMT PF01135.14 210 1.5e-06 21.7 0.0 1 1 1.6e-08 3.1e-06 20.7 0.0 58 122 14 75 2 87 0.83 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_8 - 276 MMR_HSR1 PF01926.18 116 0.00073 13.4 0.5 1 1 6.4e-06 0.0013 12.6 0.5 2 21 36 55 35 200 0.75 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 3_19 - 188 N6_Mtase PF02384.11 311 0.0003 13.8 0.0 1 2 1.6e-05 0.0032 10.4 0.0 28 64 32 68 21 83 0.87 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 3_19 - 188 N6_Mtase PF02384.11 311 0.0003 13.8 0.0 2 2 0.018 3.6 0.4 0.0 127 137 114 124 103 134 0.82 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 4_12 - 1588 DUF258 PF03193.11 161 9.6e-05 15.5 0.0 1 1 2.5e-06 0.00025 14.1 0.0 14 62 204 253 191 264 0.81 # 8815 # 13578 # -1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_8 - 276 DUF258 PF03193.11 161 0.00047 13.2 0.1 1 1 8.7e-06 0.00085 12.4 0.1 25 67 22 65 2 71 0.79 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 2_5 - 727 TraG-D_C PF12696.2 128 1.4e-20 67.3 0.0 1 1 1.4e-22 2.7e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 7260 # 9440 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 3_5 - 389 AAA_31 PF13614.1 157 1.9e-09 31.5 0.0 1 2 1.4e-08 2.7e-06 21.3 0.0 2 49 108 155 107 195 0.91 # 3334 # 4500 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 3_5 - 389 AAA_31 PF13614.1 157 1.9e-09 31.5 0.0 2 2 0.00018 0.035 7.9 0.1 110 152 227 268 223 272 0.84 # 3334 # 4500 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_35 - 519 NTPase_1 PF03266.10 168 0.00011 15.8 0.5 1 2 0.0004 0.078 6.5 0.0 4 22 41 59 39 72 0.82 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 NTPase_1 PF03266.10 168 0.00011 15.8 0.5 2 2 0.00033 0.065 6.8 0.3 86 148 219 283 191 296 0.80 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 12_3 - 181 AAA_33 PF13671.1 143 6e-10 33.0 0.0 1 1 8.5e-12 8.4e-10 32.6 0.0 2 127 3 130 2 151 0.73 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_8 - 276 AAA_33 PF13671.1 143 1.5e-05 18.7 0.1 1 1 6.7e-07 6.6e-05 16.7 0.1 3 33 37 82 35 203 0.61 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 3_19 - 188 Methyltransf_26 PF13659.1 117 4.9e-14 46.2 0.0 1 1 9e-16 8.8e-14 45.4 0.0 2 114 52 147 51 150 0.91 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 10_5 - 246 Methyltransf_26 PF13659.1 117 8.8e-09 29.3 0.0 1 1 1.5e-10 1.5e-08 28.6 0.0 2 83 31 106 30 200 0.81 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_4 - 1707 AAA_30 PF13604.1 196 3.1e-42 138.2 22.3 1 2 1.8e-05 0.00089 12.7 3.7 7 132 420 539 416 559 0.83 # 2140 # 7260 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_4 - 1707 AAA_30 PF13604.1 196 3.1e-42 138.2 22.3 2 2 9.8e-44 4.8e-42 137.6 1.6 1 186 968 1156 968 1160 0.94 # 2140 # 7260 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 1_35 - 519 AAA_30 PF13604.1 196 0.00098 12.6 0.0 1 1 5.1e-05 0.0025 11.2 0.0 12 44 30 62 26 76 0.85 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_8 - 276 AAA_30 PF13604.1 196 0.0012 12.3 0.3 1 1 5.9e-05 0.0029 11.0 0.1 15 53 30 68 21 83 0.74 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 2_5 - 727 AAA_30 PF13604.1 196 0.0016 11.8 0.0 1 1 7.2e-05 0.0035 10.8 0.0 21 57 188 224 180 230 0.85 # 7260 # 9440 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 2_23 - 876 FtsK_SpoIIIE PF01580.13 205 8.1e-06 19.3 0.2 1 2 4.1e-06 0.0004 13.7 0.0 39 63 476 504 463 507 0.84 # 22825 # 25452 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_23 - 876 FtsK_SpoIIIE PF01580.13 205 8.1e-06 19.3 0.2 2 2 0.0077 0.75 3.0 0.1 75 167 530 626 529 632 0.85 # 22825 # 25452 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 1_35 - 519 FtsK_SpoIIIE PF01580.13 205 0.00049 13.5 0.0 1 1 1.1e-05 0.001 12.4 0.0 36 58 34 56 15 62 0.82 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 6_5 - 304 TIGR02075 TIGR02075 233 0.00084 12.5 0.1 1 2 0.013 2.6 1.1 0.0 5 90 8 98 4 128 0.67 # 2812 # 3723 # 1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 6_5 - 304 TIGR02075 TIGR02075 233 0.00084 12.5 0.1 2 2 0.0001 0.02 8.0 0.1 135 166 206 236 158 252 0.70 # 2812 # 3723 # 1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 3_19 - 188 MTS PF05175.9 170 1.7e-09 31.1 0.0 1 1 2.4e-11 2.3e-09 30.7 0.0 31 141 50 149 41 166 0.84 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 10_5 - 246 MTS PF05175.9 170 1.2e-07 25.1 0.0 1 1 2e-09 2e-07 24.4 0.0 24 118 22 113 9 121 0.85 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 6_9 - 74 FbpA PF05833.6 455 0.00067 12.1 3.6 1 1 3.7e-06 0.00072 12.0 3.6 396 451 9 63 2 67 0.77 # 7180 # 7401 # -1 # ID=6_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.518 3_19 - 188 Methyltrans_SAM PF10672.4 286 0.0018 11.0 0.0 1 1 1.3e-05 0.0026 10.5 0.0 196 261 113 173 100 180 0.78 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 3_19 - 188 Met_10 PF02475.11 200 0.001 12.5 0.0 1 1 7e-06 0.0014 12.1 0.0 99 189 48 132 38 145 0.78 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_8 - 276 ABC_tran PF00005.22 137 7.4e-30 97.9 0.0 1 1 1.1e-31 1.1e-29 97.4 0.0 1 136 23 170 23 171 0.89 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 1_35 - 519 ABC_tran PF00005.22 137 3.4e-11 37.4 0.4 1 1 8.8e-12 8.6e-10 32.9 0.4 8 134 33 235 29 237 0.56 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_18 - 370 NAD_binding_4 PF07993.7 249 1.8e-53 174.8 0.0 1 1 1.1e-55 2.3e-53 174.5 0.0 1 248 6 237 6 238 0.94 # 12901 # 14010 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.383 2_4 - 1707 AAA_19 PF13245.1 76 2.3e-07 24.4 1.6 1 1 1.3e-08 8.5e-07 22.6 0.3 7 76 981 1047 974 1047 0.74 # 2140 # 7260 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 1_35 - 519 AAA_19 PF13245.1 76 2.3e-05 18.0 0.0 1 1 9.1e-07 6e-05 16.7 0.0 9 37 35 62 30 73 0.85 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 12_3 - 181 AAA_19 PF13245.1 76 0.00084 13.0 0.0 1 1 5.3e-05 0.0034 11.0 0.0 15 33 5 22 2 36 0.85 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_18 - 370 NAD_binding_10 PF13460.1 183 2.7e-06 21.3 0.0 1 1 1.6e-06 0.00032 14.6 0.0 2 148 5 193 4 204 0.70 # 12901 # 14010 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.383 2_23 - 876 AAA_10 PF12846.2 304 7.6e-49 160.6 0.0 1 1 2.6e-50 1.3e-48 159.8 0.0 1 294 479 768 479 774 0.88 # 22825 # 25452 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_5 - 727 AAA_10 PF12846.2 304 1.9e-10 34.5 0.0 1 1 7.1e-11 3.5e-09 30.3 0.0 3 296 187 494 186 500 0.69 # 7260 # 9440 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_35 - 519 AAA_10 PF12846.2 304 0.00027 14.3 0.1 1 2 7.4e-05 0.0036 10.6 0.0 3 22 38 57 36 67 0.86 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 AAA_10 PF12846.2 304 0.00027 14.3 0.1 2 2 0.058 2.9 1.0 0.0 212 261 222 268 202 273 0.80 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_8 - 276 AAA_10 PF12846.2 304 0.00036 13.9 1.4 1 2 4e-05 0.0019 11.4 1.0 4 34 36 66 33 159 0.89 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 1_8 - 276 AAA_10 PF12846.2 304 0.00036 13.9 1.4 2 2 0.081 4 0.6 0.0 242 266 181 205 170 210 0.87 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 10_5 - 246 NodS PF05401.6 201 5.1e-08 26.4 0.0 1 1 4.2e-10 8.3e-08 25.7 0.0 41 120 27 106 7 116 0.86 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_8 - 276 SbcCD_C PF13558.1 90 1.3e-06 22.1 0.0 1 1 4.8e-08 9.3e-06 19.4 0.0 26 89 136 186 119 187 0.79 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 1_18 - 370 3Beta_HSD PF01073.14 280 1.1e-08 27.9 0.0 1 1 8.7e-11 1.7e-08 27.3 0.0 1 158 5 175 5 196 0.75 # 12901 # 14010 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.383 10_5 - 246 Methyltransf_31 PF13847.1 152 2.1e-07 24.5 0.1 1 1 3.1e-09 3e-07 24.0 0.1 2 76 28 97 27 213 0.87 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_19 - 188 Methyltransf_31 PF13847.1 152 1.2e-06 22.0 0.0 1 1 1.5e-08 1.5e-06 21.7 0.0 5 119 52 162 48 183 0.83 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 10_5 - 246 TRM13 PF05206.9 259 0.00026 14.1 0.1 1 1 2.1e-06 0.00041 13.5 0.1 4 67 15 78 12 101 0.79 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_4 - 1707 Viral_helicase1 PF01443.13 234 0.0017 11.7 0.0 1 2 0.00032 0.063 6.6 0.0 1 23 988 1011 988 1151 0.76 # 2140 # 7260 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_4 - 1707 Viral_helicase1 PF01443.13 234 0.0017 11.7 0.0 2 2 0.0064 1.2 2.3 0.0 171 234 1387 1447 1342 1447 0.63 # 2140 # 7260 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 10_5 - 246 DOT1 PF08123.8 205 6.4e-05 16.2 0.2 1 1 8.2e-07 0.00016 14.9 0.0 28 88 15 73 11 100 0.79 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_18 - 370 Epimerase PF01370.16 236 3.5e-12 40.1 0.0 1 1 2.7e-14 5.3e-12 39.5 0.0 2 174 5 195 4 255 0.70 # 12901 # 14010 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.383 2_5 - 727 TrwB_AAD_bind PF10412.4 386 3.9e-150 493.5 0.0 1 1 4.9e-152 4.8e-150 493.3 0.0 2 386 172 561 171 561 0.99 # 7260 # 9440 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 2_23 - 876 TrwB_AAD_bind PF10412.4 386 7.9e-07 21.8 0.1 1 2 4.8e-08 4.7e-06 19.2 0.0 15 53 479 517 470 547 0.80 # 22825 # 25452 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_23 - 876 TrwB_AAD_bind PF10412.4 386 7.9e-07 21.8 0.1 2 2 0.041 4 -0.3 0.0 261 317 713 769 684 772 0.92 # 22825 # 25452 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_4 - 1707 AAA_11 PF13086.1 236 0.00032 14.2 2.3 1 1 3e-06 0.00058 13.3 0.0 2 75 969 1039 968 1060 0.80 # 2140 # 7260 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_5 - 727 T4SS-DNA_transf PF02534.9 469 1.1e-09 31.2 0.0 1 1 3.1e-11 3.1e-09 29.7 0.0 264 361 382 476 198 500 0.83 # 7260 # 9440 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 2_23 - 876 T4SS-DNA_transf PF02534.9 469 0.0004 12.8 0.0 1 2 0.0031 0.31 3.3 0.0 105 184 533 606 470 625 0.82 # 22825 # 25452 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_23 - 876 T4SS-DNA_transf PF02534.9 469 0.0004 12.8 0.0 2 2 0.00021 0.021 7.2 0.0 319 378 711 769 662 771 0.90 # 22825 # 25452 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 10_5 - 246 TIGR00755 TIGR00755 256 3.1e-44 144.7 2.8 1 1 3.9e-46 3.8e-44 144.4 2.8 5 227 5 221 1 235 0.88 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_19 - 188 TIGR00755 TIGR00755 256 5e-09 29.3 0.0 1 1 6.8e-11 6.7e-09 28.9 0.0 8 105 29 123 25 134 0.90 # 13780 # 14343 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 2_23 - 876 Pox_A32 PF04665.7 241 0.0017 11.5 0.0 1 1 2.3e-05 0.0045 10.1 0.0 7 38 473 504 469 519 0.85 # 22825 # 25452 # -1 # ID=2_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 10_5 - 246 Methyltransf_23 PF13489.1 161 2e-06 21.5 0.1 1 1 2.9e-08 5.8e-06 20.0 0.1 7 60 16 85 9 225 0.83 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 12_3 - 181 AAA_24 PF13479.1 213 0.0002 14.9 0.0 1 1 2.5e-06 0.00024 14.5 0.0 6 33 3 34 1 99 0.87 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_35 - 519 AAA_24 PF13479.1 213 0.0021 11.5 0.9 1 3 0.0055 0.54 3.6 0.0 6 21 39 54 36 59 0.86 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 AAA_24 PF13479.1 213 0.0021 11.5 0.9 2 3 0.059 5.8 0.3 0.0 103 143 105 147 95 191 0.73 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 AAA_24 PF13479.1 213 0.0021 11.5 0.9 3 3 0.0045 0.44 3.9 0.1 114 156 247 291 238 307 0.74 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 NACHT PF05729.7 166 4.3e-06 20.3 0.0 1 2 7.2e-06 0.00071 13.1 0.0 3 41 39 78 37 92 0.80 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_35 - 519 NACHT PF05729.7 166 4.3e-06 20.3 0.0 2 2 0.0026 0.25 4.8 0.0 72 109 218 249 177 293 0.72 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 12_3 - 181 NACHT PF05729.7 166 0.00016 15.2 0.1 1 1 4.2e-06 0.00041 13.9 0.0 2 21 2 21 1 29 0.91 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_45 - 236 AAA_25 PF13481.1 194 1e-24 80.8 0.0 1 1 2.1e-26 1.4e-24 80.4 0.0 48 193 1 140 1 141 0.86 # 39148 # 39855 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.679 1_35 - 519 AAA_25 PF13481.1 194 0.00046 13.5 0.0 1 1 1.6e-05 0.001 12.3 0.0 30 58 33 61 22 84 0.80 # 28055 # 29611 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.352 1_8 - 276 AAA_25 PF13481.1 194 0.0013 12.0 0.1 1 1 6.5e-05 0.0043 10.3 0.1 30 57 30 57 23 87 0.85 # 4521 # 5348 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.517 12_3 - 181 AAA_28 PF13521.1 163 0.0003 14.6 0.0 1 1 4.7e-06 0.00092 13.0 0.0 2 29 3 33 2 58 0.77 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 10_5 - 246 Methyltransf_4 PF02390.12 197 0.00028 13.8 0.1 1 1 2.7e-06 0.00053 12.9 0.0 17 52 27 62 3 102 0.72 # 3538 # 4275 # -1 # ID=10_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 12_3 - 181 APS_kinase PF01583.15 157 2.6e-05 17.8 0.0 1 2 1e-05 0.002 11.6 0.0 4 24 2 22 1 30 0.89 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 12_3 - 181 APS_kinase PF01583.15 157 2.6e-05 17.8 0.0 2 2 0.0021 0.41 4.1 0.1 34 72 107 147 91 157 0.86 # 1130 # 1672 # 1 # ID=12_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/59ca5f90-45ad-4f2f-8110-bda629c1990e # Target file: checkm_output/bins/pm1987/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1987/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/59ca5f90-45ad-4f2f-8110-bda629c1990e checkm_output/bins/pm1987/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:02:28 2020 # [ok]