# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 210 tRNA-synt_1d PF00750.14 354 1.9e-05 12.2 0.1 1 2 0.089 0.44 -2.2 0.0 173 191 3 21 1 25 0.81 # 2357 # 2986 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=3bp;gc_cont=0.386 1_5 - 210 tRNA-synt_1d PF00750.14 354 1.9e-05 12.2 0.1 2 2 9e-06 4.5e-05 11.0 0.0 169 204 81 116 71 123 0.85 # 2357 # 2986 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=3bp;gc_cont=0.386 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/57a57b5b-b1d1-4ee0-a99f-f466903ef82d # Target file: checkm_output/bins/pm1976/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1976/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/57a57b5b-b1d1-4ee0-a99f-f466903ef82d checkm_output/bins/pm1976/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:02:20 2020 # [ok]