# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_23 - 321 Mg_chelatase PF01078.16 207 3.7e-05 15.0 0.0 1 1 1.3e-06 7.2e-05 14.0 0.0 12 44 139 171 132 224 0.75 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 cobW PF02492.14 178 1.1e-05 17.0 0.5 1 1 5.4e-07 2.9e-05 15.6 0.5 4 44 153 195 151 277 0.81 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 IstB_IS21 PF01695.12 178 1.8e-05 16.2 0.0 1 1 5.6e-07 3e-05 15.5 0.0 44 74 146 176 129 206 0.87 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_5 - 255 MipZ PF09140.6 261 1.4e-10 32.6 0.1 1 1 5.6e-11 1.5e-09 29.3 0.1 3 129 4 145 2 166 0.72 # 3597 # 4361 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_53 - 242 MipZ PF09140.6 261 0.00015 12.9 0.1 1 2 2e-05 0.00054 11.1 0.1 6 48 8 50 3 83 0.82 # 52198 # 52923 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629 1_53 - 242 MipZ PF09140.6 261 0.00015 12.9 0.1 2 2 0.036 0.96 0.4 0.0 72 106 54 88 45 102 0.81 # 52198 # 52923 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629 1_5 - 255 YhjQ PF06564.7 244 5.4e-05 14.6 0.3 1 1 2.6e-05 0.0014 10.0 0.3 4 238 4 249 1 254 0.60 # 3597 # 4361 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_23 - 321 AIG1 PF04548.11 212 0.00018 12.7 0.1 1 1 5e-06 0.00027 12.1 0.1 1 27 150 176 150 197 0.85 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_21 - 114 SSB PF00436.20 104 3.9e-30 95.9 0.0 1 1 8e-32 4.3e-30 95.7 0.0 2 104 4 104 3 104 0.96 # 16473 # 16814 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.596 1_39 - 175 Methyltransf_18 PF12847.2 112 8.7e-05 15.2 0.0 1 1 2.1e-06 0.00011 14.8 0.0 20 71 38 93 31 141 0.75 # 31117 # 31641 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.657 1_23 - 321 AAA_2 PF07724.9 171 0.00043 12.3 0.1 1 2 0.059 3.2 -0.4 0.1 142 165 5 28 2 33 0.84 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 AAA_2 PF07724.9 171 0.00043 12.3 0.1 2 2 3.9e-05 0.0021 10.0 0.0 4 54 150 200 147 207 0.85 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 DUF87 PF01935.12 229 1.9e-07 23.1 0.0 1 1 5.5e-09 3e-07 22.5 0.0 24 63 150 190 136 231 0.81 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 NB-ARC PF00931.17 287 0.00021 12.2 0.0 1 1 5.7e-06 0.00031 11.7 0.0 22 58 152 188 140 200 0.80 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 Septin PF00735.13 281 7.2e-06 17.2 0.1 1 1 2e-07 1.1e-05 16.6 0.1 6 50 151 192 148 215 0.70 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_43 - 303 AAA_22 PF13401.1 131 2.2e-17 55.5 0.0 1 1 2.3e-18 4.1e-17 54.6 0.0 7 126 64 190 59 194 0.94 # 36354 # 37262 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.658 1_26 - 853 AAA_22 PF13401.1 131 2.6e-05 16.4 0.1 1 2 0.0011 0.02 7.1 0.0 5 30 489 514 485 558 0.85 # 19350 # 21908 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_26 - 853 AAA_22 PF13401.1 131 2.6e-05 16.4 0.1 2 2 0.0014 0.026 6.7 0.0 75 100 676 701 648 733 0.73 # 19350 # 21908 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_23 - 321 AAA_22 PF13401.1 131 5.8e-05 15.3 0.0 1 1 5.9e-06 0.00011 14.5 0.0 5 36 150 181 146 220 0.72 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 ATP_bind_1 PF03029.12 238 0.00025 12.6 0.0 1 1 6.9e-06 0.00037 12.1 0.0 1 19 154 172 154 210 0.87 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_5 - 255 SRP54 PF00448.17 196 0.00036 12.0 0.6 1 2 0.0005 0.027 5.9 0.1 11 43 12 44 3 55 0.90 # 3597 # 4361 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_5 - 255 SRP54 PF00448.17 196 0.00036 12.0 0.6 2 2 0.0024 0.13 3.7 0.0 48 92 80 123 74 133 0.70 # 3597 # 4361 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_23 - 321 AAA_17 PF13207.1 121 5.3e-05 16.1 0.0 1 1 2.3e-06 0.00012 14.9 0.0 2 20 152 170 151 237 0.81 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 Miro PF08477.8 119 1.4e-05 17.6 0.0 1 1 4.7e-07 2.5e-05 16.8 0.0 2 26 152 177 151 243 0.75 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 MobB PF03205.9 140 7.3e-06 17.8 0.0 1 1 3.2e-07 1.8e-05 16.6 0.0 3 28 152 177 150 200 0.81 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_53 - 242 ArsA_ATPase PF02374.10 305 1.4e-08 26.1 0.0 1 1 8.8e-10 2.4e-08 25.4 0.0 4 41 6 43 3 86 0.92 # 52198 # 52923 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629 1_5 - 255 ArsA_ATPase PF02374.10 305 0.00027 12.0 0.3 1 2 0.00013 0.0035 8.4 0.0 9 39 10 40 2 52 0.88 # 3597 # 4361 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_5 - 255 ArsA_ATPase PF02374.10 305 0.00027 12.0 0.3 2 2 0.02 0.53 1.2 0.1 125 137 113 125 93 177 0.76 # 3597 # 4361 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_23 - 321 PhoH PF02562.11 205 4.3e-05 14.8 0.1 1 1 1.4e-06 7.6e-05 14.0 0.1 9 56 139 186 133 198 0.83 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 T2SE PF00437.15 272 2.1e-88 287.7 0.0 1 1 4.6e-90 2.5e-88 287.5 0.0 5 271 27 295 23 296 0.97 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 Zeta_toxin PF06414.7 201 2.9e-05 15.3 0.0 1 1 1.9e-06 5.2e-05 14.4 0.0 16 46 149 182 137 219 0.69 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_53 - 242 Zeta_toxin PF06414.7 201 0.00045 11.4 0.0 1 1 2.7e-05 0.00072 10.7 0.0 19 70 6 61 2 123 0.74 # 52198 # 52923 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629 1_53 - 242 Fer4_NifH PF00142.13 273 0.00024 12.3 0.2 1 1 7.2e-06 0.00039 11.6 0.2 4 39 7 42 4 54 0.91 # 52198 # 52923 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629 1_23 - 321 Arch_ATPase PF01637.13 234 3.5e-05 15.6 0.0 1 1 1.1e-06 5.9e-05 14.9 0.0 22 56 151 186 141 220 0.74 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 AAA_16 PF13191.1 185 2.9e-06 19.4 0.0 1 1 1.7e-07 4.6e-06 18.7 0.0 24 48 149 173 136 285 0.75 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_43 - 303 AAA_16 PF13191.1 185 8.7e-06 17.8 0.0 1 1 4.9e-06 0.00013 14.0 0.0 8 103 45 145 43 186 0.62 # 36354 # 37262 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.658 1_23 - 321 AAA_23 PF13476.1 202 0.00015 14.2 0.7 1 1 4.9e-06 0.00026 13.4 0.7 22 39 152 169 148 170 0.92 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 AAA_18 PF13238.1 129 0.00049 12.5 0.0 1 1 1.9e-05 0.001 11.4 0.0 1 18 152 169 152 209 0.82 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_5 - 255 CbiA PF01656.18 195 1.9e-48 156.5 0.0 1 1 8.7e-50 2.3e-48 156.2 0.0 2 195 5 216 4 216 0.84 # 3597 # 4361 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_53 - 242 CbiA PF01656.18 195 1.1e-09 30.0 0.2 1 1 4.6e-11 1.2e-09 29.8 0.2 2 42 6 46 5 218 0.82 # 52198 # 52923 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629 1_23 - 321 AAA_14 PF13173.1 128 0.00038 12.4 0.0 1 1 1.1e-05 0.00058 11.8 0.0 3 36 150 185 148 226 0.74 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 AAA_29 PF13555.1 62 1.8e-07 22.7 0.0 1 1 1.3e-08 3.6e-07 21.7 0.0 22 45 148 171 140 182 0.84 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_26 - 853 AAA_29 PF13555.1 62 0.00028 12.5 0.0 1 1 2.9e-05 0.00078 11.1 0.0 23 40 489 505 479 513 0.80 # 19350 # 21908 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_23 - 321 AAA PF00004.24 132 4e-05 15.9 0.0 1 1 1.4e-06 7.8e-05 14.9 0.0 1 23 152 174 152 225 0.80 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 Bac_DnaA PF00308.13 219 8.9e-05 14.2 0.0 1 1 2.1e-06 0.00012 13.8 0.0 34 71 149 186 123 230 0.80 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 Sigma54_activat PF00158.21 168 0.00017 13.1 0.0 1 1 6e-06 0.00032 12.2 0.0 13 55 140 185 130 198 0.73 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 MMR_HSR1 PF01926.18 116 3.6e-05 15.8 0.1 1 1 1.2e-06 6.5e-05 15.0 0.1 2 26 152 175 151 216 0.73 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_43 - 303 TniB PF05621.6 302 2.6e-213 698.1 6.2 1 1 5.4e-215 2.9e-213 697.9 6.2 1 302 1 302 1 302 1.00 # 36354 # 37262 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.658 1_23 - 321 DUF258 PF03193.11 161 4.1e-05 14.9 0.0 1 1 1.2e-06 6.3e-05 14.2 0.0 27 60 140 174 124 217 0.74 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_49 - 638 TraG-D_C PF12696.2 128 7.3e-35 111.7 0.0 1 1 4.3e-36 1.2e-34 111.0 0.0 1 127 444 568 444 569 0.90 # 46864 # 48777 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.662 1_26 - 853 TraG-D_C PF12696.2 128 0.0004 12.3 0.0 1 1 3.4e-05 0.00092 11.1 0.0 4 72 691 763 688 781 0.74 # 19350 # 21908 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_53 - 242 AAA_31 PF13614.1 157 0.00016 13.7 0.0 1 1 2e-05 0.00053 12.0 0.0 1 47 3 49 3 90 0.84 # 52198 # 52923 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629 1_5 - 255 AAA_31 PF13614.1 157 0.00031 12.8 0.1 1 1 3.7e-05 0.00099 11.1 0.1 9 155 10 151 9 153 0.71 # 3597 # 4361 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_39 - 175 Methyltransf_26 PF13659.1 117 4e-05 15.7 0.0 1 1 1.1e-06 5.7e-05 15.2 0.0 3 95 25 107 23 136 0.71 # 31117 # 31641 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.657 1_23 - 321 AAA_30 PF13604.1 196 4.2e-06 18.5 0.0 1 1 1.2e-07 6.7e-06 17.8 0.0 3 53 135 186 133 218 0.81 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 FtsK_SpoIIIE PF01580.13 205 3.4e-10 31.7 0.0 1 1 1.2e-11 6.6e-10 30.8 0.0 28 85 139 195 129 219 0.83 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 Dynamin_N PF00350.18 168 9.9e-05 14.2 0.0 1 1 2.8e-06 0.00015 13.7 0.0 1 23 152 174 152 210 0.88 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_26 - 853 ABC_tran PF00005.22 137 2.5e-06 19.9 0.0 1 2 3.6e-06 9.6e-05 14.8 0.0 5 41 482 518 480 559 0.85 # 19350 # 21908 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_26 - 853 ABC_tran PF00005.22 137 2.5e-06 19.9 0.0 2 2 0.059 1.6 1.1 0.0 119 135 680 696 678 697 0.90 # 19350 # 21908 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_23 - 321 ABC_tran PF00005.22 137 6.2e-06 18.6 0.0 1 1 3.7e-07 1e-05 17.9 0.0 8 36 146 174 141 230 0.80 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 AAA_19 PF13245.1 76 5.1e-08 24.7 0.1 1 1 2.6e-09 1.4e-07 23.3 0.1 2 52 141 189 140 195 0.73 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_26 - 853 AAA_10 PF12846.2 304 2.8e-34 110.9 0.1 1 1 2.7e-35 4.9e-34 110.1 0.1 2 294 489 761 488 773 0.85 # 19350 # 21908 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_23 - 321 AAA_10 PF12846.2 304 2.6e-08 25.6 0.0 1 1 2.1e-09 3.8e-08 25.1 0.0 2 41 150 191 149 289 0.86 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_53 - 242 AAA_10 PF12846.2 304 1.8e-05 16.3 0.0 1 1 1.5e-06 2.6e-05 15.7 0.0 3 47 5 49 3 118 0.83 # 52198 # 52923 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629 1_23 - 321 ResIII PF04851.10 184 2.9e-05 16.0 0.0 1 1 8e-07 4.3e-05 15.4 0.0 7 62 65 191 60 214 0.69 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_3 - 343 DUF3584 PF12128.3 1201 4.4e-05 12.9 50.0 1 2 0.00075 0.04 3.1 4.6 261 326 65 131 57 138 0.78 # 1343 # 2371 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.747 1_3 - 343 DUF3584 PF12128.3 1201 4.4e-05 12.9 50.0 2 2 8.9e-06 0.00048 9.5 50.4 251 484 88 328 82 337 0.83 # 1343 # 2371 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.747 1_23 - 321 DUF2075 PF09848.4 352 0.00023 12.2 0.0 1 1 5.8e-06 0.00031 11.7 0.0 2 46 150 193 149 220 0.77 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 Adeno_IVa2 PF02456.10 370 3.6e-05 14.5 0.0 1 1 9.5e-07 5.1e-05 14.0 0.0 91 129 153 191 141 218 0.84 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 PduV-EutP PF10662.4 143 4.1e-06 18.4 0.1 1 1 1.3e-07 7.1e-06 17.6 0.1 2 43 150 193 149 216 0.80 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 DEAD PF00270.24 169 2.1e-06 19.4 0.1 1 1 6e-08 3.3e-06 18.7 0.1 3 60 137 195 135 229 0.76 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 DUF815 PF05673.8 250 0.00012 13.1 0.0 1 1 3.2e-06 0.00017 12.5 0.0 52 79 148 175 127 203 0.83 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_49 - 638 TrwB_AAD_bind PF10412.4 386 6e-29 92.8 0.0 1 1 5.1e-30 1.4e-28 91.6 0.0 17 366 177 568 169 574 0.82 # 46864 # 48777 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.662 1_23 - 321 TrwB_AAD_bind PF10412.4 386 2.4e-06 18.3 0.0 1 1 1.3e-07 3.6e-06 17.8 0.0 13 55 147 191 142 208 0.85 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 AAA_11 PF13086.1 236 0.00017 13.2 0.0 1 1 4.8e-06 0.00026 12.6 0.0 4 42 136 185 133 247 0.67 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 Sigma54_activ_2 PF14532.1 138 0.0002 13.5 0.0 1 1 6.4e-06 0.00035 12.7 0.0 12 44 140 172 135 199 0.86 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_49 - 638 T4SS-DNA_transf PF02534.9 469 7.2e-165 541.0 0.0 1 1 1.6e-166 8.8e-165 540.7 0.0 1 464 121 620 121 624 0.98 # 46864 # 48777 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.662 1_43 - 303 AAA_32 PF13654.1 509 4.3e-05 14.3 0.0 1 2 7.3e-06 0.00039 11.1 0.0 8 81 34 112 26 124 0.86 # 36354 # 37262 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.658 1_43 - 303 AAA_32 PF13654.1 509 4.3e-05 14.3 0.0 2 2 0.0097 0.52 0.8 0.0 472 503 255 286 241 291 0.90 # 36354 # 37262 # -1 # ID=1_43;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.658 1_39 - 175 MethyltransfD12 PF02086.10 260 1.4e-07 23.2 0.0 1 2 0.00046 0.025 6.0 0.0 8 60 12 61 3 72 0.83 # 31117 # 31641 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.657 1_39 - 175 MethyltransfD12 PF02086.10 260 1.4e-07 23.2 0.0 2 2 6e-07 3.3e-05 15.5 0.0 176 220 84 126 68 147 0.79 # 31117 # 31641 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.657 1_23 - 321 Pox_A32 PF04665.7 241 5.7e-05 14.5 0.0 1 1 1.8e-06 9.5e-05 13.8 0.0 14 40 150 176 138 211 0.77 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 GTP_EFTU PF00009.22 188 8.9e-06 17.3 0.1 1 1 2.4e-07 1.3e-05 16.7 0.1 2 30 148 176 147 212 0.84 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 RNA_helicase PF00910.17 107 0.00044 12.5 0.0 1 1 1.6e-05 0.00088 11.5 0.0 1 29 152 178 152 209 0.82 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_53 - 242 AAA_24 PF13479.1 213 2.5e-05 16.0 0.0 1 1 6.4e-07 3.5e-05 15.5 0.0 3 58 3 70 1 114 0.72 # 52198 # 52923 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629 1_23 - 321 UvrD-helicase PF00580.16 315 6.5e-05 14.3 0.1 1 1 1.8e-06 9.8e-05 13.7 0.1 8 41 144 177 134 190 0.74 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_23 - 321 NACHT PF05729.7 166 1.4e-05 16.9 0.0 1 1 2e-06 5.4e-05 14.9 0.0 2 26 151 175 150 204 0.84 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_53 - 242 NACHT PF05729.7 166 0.00031 12.4 0.6 1 1 2.4e-05 0.00064 11.4 0.6 3 25 6 28 5 37 0.82 # 52198 # 52923 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629 1_5 - 255 AAA_25 PF13481.1 194 0.00031 12.2 0.0 1 1 9.5e-06 0.00051 11.5 0.0 42 150 11 122 2 128 0.70 # 3597 # 4361 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_1 - 218 Ribosomal_L4 PF00573.17 192 0.00019 12.9 3.3 1 1 6.5e-06 0.00035 12.0 3.3 16 111 88 189 85 209 0.79 # 143 # 796 # -1 # ID=1_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.696 1_23 - 321 AAA_28 PF13521.1 163 6.6e-05 14.9 0.0 1 1 1.9e-06 0.0001 14.3 0.0 2 20 152 170 151 207 0.84 # 17595 # 18557 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/02008eb1-e450-4069-a9ae-a053f2ed6207 # Target file: checkm_output/bins/pm1943/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1943/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/02008eb1-e450-4069-a9ae-a053f2ed6207 checkm_output/bins/pm1943/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:02:02 2020 # [ok]