# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_6 - 515 Methyltransf_12 PF08242.7 99 0.058 2.9 11.7 1 2 0.051 0.3 0.6 0.1 37 74 311 349 283 368 0.79 # 3577 # 5121 # -1 # ID=1_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_6 - 515 Methyltransf_12 PF08242.7 99 0.058 2.9 11.7 2 2 0.00021 0.0013 8.3 0.1 37 98 369 432 357 433 0.76 # 3577 # 5121 # -1 # ID=1_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.430 1_1 - 140 AAA_23 PF13476.1 202 9.5e-05 11.7 6.7 1 1 1.8e-05 0.00011 11.5 6.7 125 196 36 126 12 130 0.56 # 267 # 686 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.529 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/8324b1e0-6247-4ffc-a3d8-020b409e318c # Target file: checkm_output/bins/pm1880/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1880/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8324b1e0-6247-4ffc-a3d8-020b409e318c checkm_output/bins/pm1880/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:01:22 2020 # [ok]