# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_1 - 492 cobW PF02492.14 178 0.00045 13.3 1.3 1 2 0.0051 0.86 2.6 0.0 3 19 33 49 31 59 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 cobW PF02492.14 178 0.00045 13.3 1.3 2 2 6.1e-05 0.01 8.9 0.3 3 28 325 349 323 352 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.044 7.5 46.3 1 5 0.019 3.2 1.5 8.8 39 98 89 152 77 158 0.72 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.044 7.5 46.3 2 5 0.00084 0.14 5.9 3.1 50 100 146 196 143 199 0.89 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.044 7.5 46.3 3 5 2.6e-06 0.00044 13.9 12.2 19 100 216 294 201 297 0.85 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.044 7.5 46.3 4 5 0.00031 0.052 7.3 2.1 62 105 284 327 282 330 0.90 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.044 7.5 46.3 5 5 0.0059 0.99 3.1 1.6 82 105 304 327 296 345 0.51 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_114 - 262 MipZ PF09140.6 261 3e-10 33.2 0.0 1 2 6.6e-10 1.1e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_114 - 262 MipZ PF09140.6 261 3e-10 33.2 0.0 2 2 0.00031 0.053 6.2 0.0 89 122 117 150 89 166 0.74 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_63 - 176 SSB PF00436.20 104 2.1e-41 133.7 0.3 1 1 1.5e-43 2.6e-41 133.4 0.3 1 104 5 109 5 109 0.99 # 50919 # 51446 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.544 1_12 - 504 UvrD_C_2 PF13538.1 104 1.3e-10 35.0 0.0 1 1 3.5e-12 5.9e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_92 - 622 DUF87 PF01935.12 229 1.2e-08 28.6 0.1 1 1 5e-10 2.8e-08 27.5 0.1 24 63 173 211 168 379 0.87 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_77 - 816 DUF87 PF01935.12 229 4.6e-08 26.8 0.2 1 1 1.7e-09 9.5e-08 25.7 0.2 24 167 452 591 432 654 0.69 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_1 - 492 DUF87 PF01935.12 229 0.023 8.1 11.6 1 3 0.0038 0.22 4.9 0.0 25 48 32 55 20 62 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF87 PF01935.12 229 0.023 8.1 11.6 2 3 0.003 0.17 5.3 0.3 25 46 324 345 321 357 0.88 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF87 PF01935.12 229 0.023 8.1 11.6 3 3 0.027 1.5 2.2 0.1 40 196 415 472 368 486 0.56 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_22 PF13401.1 131 3e-08 27.6 0.8 1 2 0.01 0.43 4.4 0.0 9 25 35 51 30 144 0.78 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_22 PF13401.1 131 3e-08 27.6 0.8 2 2 8.2e-08 3.4e-06 20.9 0.0 7 125 325 464 322 471 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_12 - 504 AAA_22 PF13401.1 131 5.5e-05 17.0 0.0 1 2 0.00011 0.0045 10.8 0.0 8 68 23 92 17 122 0.63 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 AAA_22 PF13401.1 131 5.5e-05 17.0 0.0 2 2 0.02 0.84 3.4 0.0 82 124 189 225 164 229 0.77 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_65 - 323 AAA_22 PF13401.1 131 0.00021 15.1 0.0 1 1 1e-05 0.00044 14.1 0.0 5 54 62 103 56 164 0.76 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_92 - 622 AAA_22 PF13401.1 131 0.00021 15.1 0.0 1 1 1.7e-05 0.0007 13.4 0.0 3 68 171 231 166 287 0.83 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 492 PRK PF00485.13 194 0.00049 13.3 0.2 1 2 0.0023 0.39 3.8 0.0 2 21 33 52 32 85 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 PRK PF00485.13 194 0.00049 13.3 0.2 2 2 0.00027 0.045 6.9 0.0 2 33 325 364 325 409 0.75 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_46 - 542 DNA_methylase PF00145.12 335 1e-28 94.0 0.0 1 1 6.3e-30 5.3e-28 91.7 0.0 3 333 126 441 124 443 0.77 # 37901 # 39526 # -1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.515 1_103 - 476 DNA_methylase PF00145.12 335 1.8e-10 34.1 0.0 1 2 4.1e-11 3.5e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 90184 # 91611 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_103 - 476 DNA_methylase PF00145.12 335 1.8e-10 34.1 0.0 2 2 0.011 0.94 2.1 0.0 290 330 407 448 343 452 0.74 # 90184 # 91611 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_65 - 323 AAA_3 PF07726.6 131 0.00012 15.4 0.0 1 1 1.1e-06 0.00019 14.7 0.0 3 114 65 188 63 212 0.80 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 3_1 - 492 KAP_NTPase PF07693.9 325 0.00035 13.2 1.8 1 2 0.00056 0.094 5.3 0.0 23 47 33 57 26 143 0.77 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 KAP_NTPase PF07693.9 325 0.00035 13.2 1.8 2 2 0.00018 0.03 6.9 0.0 23 42 325 344 319 398 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_15 PF13175.1 415 6.2e-10 32.2 1.2 1 3 6e-05 0.01 8.5 0.0 26 54 34 58 5 119 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_15 PF13175.1 415 6.2e-10 32.2 1.2 2 3 6.4e-06 0.0011 11.7 0.0 26 90 326 383 300 417 0.60 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_15 PF13175.1 415 6.2e-10 32.2 1.2 3 3 3.8e-05 0.0065 9.1 0.1 352 414 415 467 393 476 0.75 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_55 - 295 N6_N4_Mtase PF01555.13 231 6.8e-09 29.2 0.1 1 2 1.7e-06 0.00029 14.0 0.0 180 223 28 72 4 76 0.84 # 42654 # 43538 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_55 - 295 N6_N4_Mtase PF01555.13 231 6.8e-09 29.2 0.1 2 2 3.5e-06 0.00059 13.0 0.1 2 172 90 267 89 283 0.72 # 42654 # 43538 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.511 3_1 - 492 AAA_17 PF13207.1 121 1.5e-06 22.7 3.7 1 2 0.0046 0.39 5.2 0.4 1 20 32 51 32 195 0.85 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_17 PF13207.1 121 1.5e-06 22.7 3.7 2 2 6e-07 5.1e-05 17.8 0.1 1 52 324 379 324 486 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 AAA_17 PF13207.1 121 4.3e-05 18.0 0.0 1 1 1.1e-06 9.3e-05 16.9 0.0 3 27 65 89 64 166 0.90 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 3_1 - 492 AAA_21 PF13304.1 303 3.2e-18 60.3 5.1 1 4 3.9e-07 6.6e-05 16.6 0.6 3 21 34 52 33 85 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_21 PF13304.1 303 3.2e-18 60.3 5.1 2 4 0.00027 0.046 7.2 0.0 237 303 100 160 91 160 0.84 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_21 PF13304.1 303 3.2e-18 60.3 5.1 3 4 4.9e-07 8.3e-05 16.2 0.0 3 43 326 361 325 384 0.76 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_21 PF13304.1 303 3.2e-18 60.3 5.1 4 4 6.8e-08 1.2e-05 19.1 0.0 233 301 405 467 386 469 0.89 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Miro PF08477.8 119 6.3e-09 30.0 1.0 1 2 5.7e-06 0.00096 13.3 0.0 1 21 32 52 32 82 0.89 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Miro PF08477.8 119 6.3e-09 30.0 1.0 2 2 3.4e-06 0.00057 14.0 0.0 1 25 324 348 324 392 0.72 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 MobB PF03205.9 140 8.3e-05 16.0 0.4 1 2 0.0031 0.26 4.7 0.0 2 20 32 50 31 61 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 MobB PF03205.9 140 8.3e-05 16.0 0.4 2 2 0.00015 0.013 8.9 0.1 3 23 325 345 323 353 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_92 - 622 MobB PF03205.9 140 0.00091 12.6 0.0 1 1 3.5e-05 0.0029 10.9 0.0 4 34 176 206 175 214 0.90 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_114 - 262 ArsA_ATPase PF02374.10 305 9.7e-06 18.4 0.0 1 2 3e-07 5.1e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_114 - 262 ArsA_ATPase PF02374.10 305 9.7e-06 18.4 0.0 2 2 0.029 4.9 -0.3 0.0 124 136 124 136 106 143 0.79 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_12 - 504 PhoH PF02562.11 205 4.3e-06 19.7 0.2 1 2 0.0013 0.22 4.3 0.0 22 45 22 45 4 61 0.78 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 PhoH PF02562.11 205 4.3e-06 19.7 0.2 2 2 7.5e-06 0.0013 11.7 0.0 122 168 196 240 193 255 0.83 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_65 - 323 T2SE PF00437.15 272 5.9e-05 15.7 0.0 1 1 1.6e-06 0.00014 14.5 0.0 105 148 40 81 9 100 0.77 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_92 - 622 T2SE PF00437.15 272 0.00031 13.3 0.0 1 1 5.9e-06 0.0005 12.6 0.0 116 162 163 206 124 227 0.78 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 492 Zeta_toxin PF06414.7 201 8.6e-05 15.3 1.5 1 2 0.00024 0.041 6.6 0.0 21 40 35 54 30 63 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Zeta_toxin PF06414.7 201 8.6e-05 15.3 1.5 2 2 0.00017 0.03 7.0 0.0 20 40 326 346 309 353 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 SMC_N PF02463.14 220 3.7e-10 33.0 6.8 1 4 0.00018 0.031 7.1 0.0 29 43 35 49 25 65 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 SMC_N PF02463.14 220 3.7e-10 33.0 6.8 2 4 0.00018 0.03 7.2 0.0 116 203 79 160 70 173 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 SMC_N PF02463.14 220 3.7e-10 33.0 6.8 3 4 0.00011 0.019 7.8 0.1 27 44 325 342 311 344 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 SMC_N PF02463.14 220 3.7e-10 33.0 6.8 4 4 7.9e-06 0.0013 11.6 0.2 117 211 382 478 359 485 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 Arch_ATPase PF01637.13 234 7.1e-05 16.2 0.0 1 1 1.4e-06 0.00012 15.5 0.0 4 44 45 85 43 94 0.91 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 3_1 - 492 Arch_ATPase PF01637.13 234 0.00018 14.9 3.0 1 3 0.039 3.3 0.9 0.0 25 40 35 50 24 85 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Arch_ATPase PF01637.13 234 0.00018 14.9 3.0 2 3 0.017 1.4 2.1 0.7 53 104 181 237 166 267 0.65 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Arch_ATPase PF01637.13 234 0.00018 14.9 3.0 3 3 6.5e-05 0.0055 10.0 0.0 24 68 326 374 323 473 0.69 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_16 PF13191.1 185 1.6e-05 18.6 0.1 1 2 0.0016 0.067 6.8 0.0 29 44 35 50 22 151 0.89 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_16 PF13191.1 185 1.6e-05 18.6 0.1 2 2 0.00029 0.012 9.2 0.0 27 49 325 347 320 410 0.84 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 AAA_16 PF13191.1 185 4e-05 17.3 0.8 1 1 2.9e-06 0.00012 15.7 0.0 7 48 47 85 42 102 0.79 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_77 - 816 AAA_16 PF13191.1 185 5.1e-05 17.0 0.2 1 1 6.4e-06 0.00027 14.6 0.2 20 62 447 489 439 648 0.64 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_100 - 206 AAA_16 PF13191.1 185 7.2e-05 16.5 0.1 1 1 2.5e-06 0.00011 15.9 0.1 27 68 11 54 3 168 0.79 # 88847 # 89464 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.513 3_1 - 492 AAA_23 PF13476.1 202 8.4e-08 26.4 8.6 1 3 3.8e-05 0.0064 10.4 0.0 24 38 35 49 25 57 0.91 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_23 PF13476.1 202 8.4e-08 26.4 8.6 2 3 0.0033 0.55 4.1 1.4 141 177 187 244 105 280 0.58 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_23 PF13476.1 202 8.4e-08 26.4 8.6 3 3 1.9e-06 0.00032 14.7 0.4 22 39 325 342 288 343 0.76 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_18 PF13238.1 129 0.0016 12.4 8.3 1 2 0.0015 0.26 5.3 0.0 1 21 33 53 33 89 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_18 PF13238.1 129 0.0016 12.4 8.3 2 2 3.5e-05 0.0058 10.6 0.6 1 23 325 354 325 475 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_14 - 347 AAA_13 PF13166.1 712 0.011 7.7 36.6 1 2 0.0019 0.32 2.9 28.3 283 457 85 259 71 272 0.58 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 AAA_13 PF13166.1 712 0.011 7.7 36.6 2 2 2.3e-05 0.004 9.2 23.2 287 474 160 339 154 345 0.78 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_114 - 262 CbiA PF01656.18 195 2e-30 99.3 0.0 1 1 3e-32 2.5e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_77 - 816 CbiA PF01656.18 195 0.00066 12.8 0.0 1 1 1.7e-05 0.0014 11.7 0.0 3 49 455 517 454 593 0.60 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_12 - 504 AAA_14 PF13173.1 128 2.8e-05 17.7 1.3 1 2 2.5e-05 0.0043 10.6 0.1 11 46 28 62 18 156 0.76 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 AAA_14 PF13173.1 128 2.8e-05 17.7 1.3 2 2 0.0011 0.19 5.3 0.0 51 99 176 227 127 241 0.73 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_1 - 492 AAA_29 PF13555.1 62 7.3e-08 25.5 0.5 1 2 1.9e-05 0.0016 11.6 0.0 25 40 32 47 20 52 0.78 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_29 PF13555.1 62 7.3e-08 25.5 0.5 2 2 2.2e-05 0.0019 11.4 0.1 14 40 314 339 310 343 0.77 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 AAA_29 PF13555.1 62 0.002 11.3 1.0 1 1 5.4e-05 0.0045 10.2 0.3 21 38 59 76 54 79 0.86 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 3_1 - 492 AAA PF00004.24 132 6.9e-05 16.7 0.1 1 2 0.011 0.96 3.3 0.0 3 22 35 54 33 124 0.77 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA PF00004.24 132 6.9e-05 16.7 0.1 2 2 6.4e-05 0.0054 10.6 0.0 3 23 327 347 325 437 0.75 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 AAA PF00004.24 132 0.00058 13.7 0.1 1 1 1.5e-05 0.0013 12.6 0.1 2 33 65 96 64 149 0.83 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_12 - 504 UvrD_C PF13361.1 351 1.5e-10 34.6 0.0 1 1 1.7e-12 2.9e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_28 - 192 PAPS_reduct PF01507.14 174 5.1e-10 33.1 0.2 1 1 7.8e-12 6.6e-10 32.7 0.2 99 172 19 99 1 101 0.81 # 14392 # 14967 # 1 # ID=2_28;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.516 1_42 - 818 PAPS_reduct PF01507.14 174 4.3e-05 17.0 0.0 1 1 2.1e-06 0.00017 15.0 0.0 3 151 69 256 67 261 0.69 # 33621 # 36074 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 3_1 - 492 MMR_HSR1 PF01926.18 116 3.1e-06 20.8 4.1 1 2 2.2e-05 0.0037 10.9 0.1 1 27 32 92 32 178 0.52 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 MMR_HSR1 PF01926.18 116 3.1e-06 20.8 4.1 2 2 4.9e-05 0.0083 9.8 0.7 1 99 324 473 324 488 0.56 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_111 - 212 N6_Mtase PF02384.11 311 6.3e-07 22.3 0.0 1 1 5.9e-09 1e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 94794 # 95429 # 1 # ID=1_111;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 3_1 - 492 DUF258 PF03193.11 161 1.3e-08 27.8 0.1 1 2 2e-07 3.4e-05 16.7 0.0 39 95 34 126 15 136 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF258 PF03193.11 161 1.3e-08 27.8 0.1 2 2 6.4e-05 0.011 8.6 0.0 38 67 325 352 302 391 0.77 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_92 - 622 TraG-D_C PF12696.2 128 4.8e-15 49.2 0.0 1 1 1e-16 8.7e-15 48.4 0.0 1 124 471 595 471 599 0.83 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_77 - 816 TraG-D_C PF12696.2 128 1.5e-06 21.8 0.0 1 1 4e-08 3.4e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_114 - 262 AAA_31 PF13614.1 157 2.2e-10 34.3 0.0 1 1 2.6e-12 4.5e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 3_1 - 492 NTPase_1 PF03266.10 168 0.00014 15.2 2.1 1 2 0.044 7.4 -0.1 0.0 1 19 32 50 32 62 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 NTPase_1 PF03266.10 168 0.00014 15.2 2.1 2 2 1.7e-05 0.0029 11.0 1.0 1 26 324 349 324 490 0.62 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_63 - 176 AAA_33 PF13671.1 143 0.00096 12.7 0.0 1 1 1.7e-05 0.0014 12.1 0.0 26 102 33 104 23 109 0.75 # 50919 # 51446 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.544 3_1 - 492 AAA_33 PF13671.1 143 0.0011 12.5 0.1 1 2 0.017 1.4 2.4 0.0 4 19 35 50 33 121 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_33 PF13671.1 143 0.0011 12.5 0.1 2 2 0.00051 0.043 7.3 0.0 3 33 326 356 325 398 0.77 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_12 - 504 AAA_30 PF13604.1 196 8.3e-08 25.7 0.1 1 2 1.8e-06 0.00016 15.0 0.0 19 80 20 81 11 109 0.77 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 AAA_30 PF13604.1 196 8.3e-08 25.7 0.1 2 2 0.00035 0.029 7.5 0.0 115 133 211 229 174 278 0.75 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_1 - 492 AAA_30 PF13604.1 196 5.4e-05 16.5 1.7 1 2 0.0044 0.37 4.0 0.0 18 39 31 51 25 61 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_30 PF13604.1 196 5.4e-05 16.5 1.7 2 2 4.7e-05 0.004 10.4 0.0 21 133 325 467 321 469 0.59 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_92 - 622 FtsK_SpoIIIE PF01580.13 205 1.4e-07 24.8 0.0 1 2 3.8e-08 2.2e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 FtsK_SpoIIIE PF01580.13 205 1.4e-07 24.8 0.0 2 2 0.042 2.4 1.2 0.0 176 204 481 509 472 510 0.86 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_77 - 816 FtsK_SpoIIIE PF01580.13 205 1.4e-06 21.6 0.1 1 1 6.6e-08 3.7e-06 20.2 0.1 33 84 446 495 401 698 0.67 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_100 - 206 FtsK_SpoIIIE PF01580.13 205 0.0012 11.9 0.2 1 1 7.1e-05 0.004 10.3 0.0 34 53 4 23 1 28 0.83 # 88847 # 89464 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.513 3_1 - 492 Dynamin_N PF00350.18 168 0.018 8.5 17.3 1 2 0.0077 1.3 2.4 11.6 1 86 33 234 33 305 0.68 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Dynamin_N PF00350.18 168 0.018 8.5 17.3 2 2 0.00049 0.083 6.3 0.3 1 111 325 437 325 487 0.51 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 ABC_tran PF00005.22 137 5.6e-31 101.3 8.0 1 4 1.1e-09 9.5e-08 26.1 0.1 5 37 24 56 20 66 0.85 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 ABC_tran PF00005.22 137 5.6e-31 101.3 8.0 2 4 2.1e-07 1.8e-05 18.7 0.0 101 137 94 128 73 128 0.79 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 ABC_tran PF00005.22 137 5.6e-31 101.3 8.0 3 4 0.082 6.9 0.6 0.5 51 102 203 255 163 276 0.46 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 ABC_tran PF00005.22 137 5.6e-31 101.3 8.0 4 4 6.3e-19 5.4e-17 56.0 0.1 2 136 313 436 312 437 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 ABC_tran PF00005.22 137 0.0012 12.8 0.0 1 1 2.7e-05 0.0023 11.9 0.0 11 46 61 96 55 117 0.85 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 3_1 - 492 ATP-synt_ab PF00006.20 215 3.5e-05 17.0 0.1 1 2 0.044 7.5 -0.4 0.0 17 34 32 49 28 55 0.88 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 ATP-synt_ab PF00006.20 215 3.5e-05 17.0 0.1 2 2 1.5e-06 0.00025 14.2 0.1 7 66 314 380 307 402 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_12 - 504 AAA_19 PF13245.1 76 2.7e-09 30.4 0.0 1 1 1.3e-10 7.1e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_65 - 323 AAA_19 PF13245.1 76 0.00026 14.4 0.1 1 1 1.1e-05 0.00059 13.3 0.1 10 35 61 86 51 112 0.76 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 3_1 - 492 AAA_19 PF13245.1 76 0.00028 14.3 0.1 1 1 2.2e-05 0.0012 12.2 0.0 10 48 323 360 317 370 0.75 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_77 - 816 AAA_10 PF12846.2 304 4.5e-59 193.9 0.1 1 1 1.4e-60 7.6e-59 193.2 0.1 1 296 451 729 451 738 0.93 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_92 - 622 AAA_10 PF12846.2 304 1.6e-18 60.8 0.2 1 1 8e-20 4.5e-18 59.3 0.2 2 299 173 549 172 553 0.71 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 492 AAA_10 PF12846.2 304 7.4e-05 15.9 4.7 1 2 0.002 0.12 5.4 0.0 6 22 35 51 33 67 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_10 PF12846.2 304 7.4e-05 15.9 4.7 2 2 5.1e-05 0.0029 10.7 0.5 4 118 325 478 322 489 0.76 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_12 - 504 ResIII PF04851.10 184 1.8e-06 21.5 0.0 1 1 5.5e-08 4.7e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_92 - 622 ResIII PF04851.10 184 0.00018 15.0 0.0 1 1 4.2e-06 0.00036 14.0 0.0 23 57 170 206 129 214 0.74 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 492 DUF3584 PF12128.3 1201 0.012 6.5 13.2 1 3 0.0039 0.33 1.7 0.0 13 36 26 49 22 50 0.84 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF3584 PF12128.3 1201 0.012 6.5 13.2 2 3 0.0094 0.79 0.5 7.1 629 703 191 268 173 301 0.38 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF3584 PF12128.3 1201 0.012 6.5 13.2 3 3 0.00017 0.015 6.2 0.3 19 37 324 342 318 343 0.88 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_14 - 347 DUF3584 PF12128.3 1201 0.028 5.3 51.1 1 2 0.01 0.86 0.4 32.3 377 534 86 242 42 246 0.65 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 DUF3584 PF12128.3 1201 0.028 5.3 51.1 2 2 4e-05 0.0034 8.3 20.6 613 709 225 327 220 345 0.80 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_12 - 504 Viral_helicase1 PF01443.13 234 1.5e-10 34.6 0.0 1 3 1.4e-05 0.0024 11.0 0.0 2 49 23 73 22 87 0.67 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 Viral_helicase1 PF01443.13 234 1.5e-10 34.6 0.0 2 3 1.8e-05 0.0031 10.7 0.0 56 105 188 234 146 256 0.78 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 Viral_helicase1 PF01443.13 234 1.5e-10 34.6 0.0 3 3 5.2e-05 0.0088 9.2 0.0 176 227 404 462 344 467 0.75 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_1 - 492 PduV-EutP PF10662.4 143 4.3e-06 19.9 1.2 1 3 8e-05 0.013 8.6 0.0 3 31 32 60 30 100 0.90 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 PduV-EutP PF10662.4 143 4.3e-06 19.9 1.2 2 3 0.00051 0.086 6.0 0.1 3 23 324 344 322 352 0.89 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 PduV-EutP PF10662.4 143 4.3e-06 19.9 1.2 3 3 0.0082 1.4 2.1 0.0 40 72 431 463 420 484 0.69 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_92 - 622 DEAD PF00270.24 169 3.9e-05 16.8 0.0 1 1 4.4e-07 7.4e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 492 DUF815 PF05673.8 250 4.3e-05 16.2 0.2 1 2 0.00013 0.021 7.3 0.0 58 77 35 54 27 63 0.85 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF815 PF05673.8 250 4.3e-05 16.2 0.2 2 2 0.00031 0.053 6.0 0.0 55 76 324 345 315 351 0.85 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_92 - 622 DUF853 PF05872.7 504 1.4e-06 20.5 0.0 1 1 1.4e-08 2.3e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 TrwB_AAD_bind PF10412.4 386 3.3e-19 62.3 0.0 1 2 8.9e-13 7.5e-11 34.8 0.0 10 54 167 211 161 313 0.70 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 TrwB_AAD_bind PF10412.4 386 3.3e-19 62.3 0.0 2 2 6.9e-10 5.9e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_77 - 816 TrwB_AAD_bind PF10412.4 386 3.8e-08 25.9 0.0 1 2 1.5e-05 0.0012 11.1 0.0 6 72 442 517 438 520 0.85 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_77 - 816 TrwB_AAD_bind PF10412.4 386 3.8e-08 25.9 0.0 2 2 5.6e-06 0.00047 12.4 0.1 232 301 643 712 613 731 0.66 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_12 - 504 AAA_11 PF13086.1 236 4.9e-07 23.2 0.1 1 1 1.9e-08 3.2e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_77 - 816 Guanylate_kin PF00625.16 183 0.00027 14.0 0.1 1 3 0.0039 0.65 3.0 0.0 3 26 452 475 450 503 0.86 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_77 - 816 Guanylate_kin PF00625.16 183 0.00027 14.0 0.1 2 3 0.012 2 1.4 0.0 76 115 597 637 591 703 0.82 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_77 - 816 Guanylate_kin PF00625.16 183 0.00027 14.0 0.1 3 3 0.001 0.18 4.9 0.0 75 131 714 770 697 777 0.87 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_92 - 622 T4SS-DNA_transf PF02534.9 469 4.3e-05 15.8 0.0 1 2 5.6e-07 9.4e-05 14.7 0.0 37 114 168 248 125 346 0.72 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 T4SS-DNA_transf PF02534.9 469 4.3e-05 15.8 0.0 2 2 0.097 16 -2.6 0.0 328 389 494 555 474 572 0.74 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 ArgK PF03308.11 267 0.00018 13.9 0.0 1 1 1.8e-06 0.00031 13.2 0.0 12 68 158 209 153 214 0.88 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 492 RNA_helicase PF00910.17 107 0.0011 12.8 0.2 1 2 0.0033 0.56 4.1 0.0 3 22 35 54 33 65 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 RNA_helicase PF00910.17 107 0.0011 12.8 0.2 2 2 0.00092 0.15 5.9 0.0 2 22 326 346 325 380 0.79 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 UPF0079 PF02367.12 123 0.00069 12.9 0.1 1 2 0.0017 0.3 4.4 0.0 18 36 33 51 26 60 0.85 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 UPF0079 PF02367.12 123 0.00069 12.9 0.1 2 2 0.00063 0.11 5.8 0.0 14 39 321 346 312 357 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_24 PF13479.1 213 6.4e-05 16.2 3.2 1 2 0.00068 0.11 5.6 0.0 8 38 35 64 30 111 0.76 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_24 PF13479.1 213 6.4e-05 16.2 3.2 2 2 2.2e-05 0.0037 10.5 0.1 4 23 323 342 321 356 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_12 - 504 UvrD-helicase PF00580.16 315 9.2e-17 54.9 3.9 1 2 5.8e-06 0.00049 13.1 0.1 2 38 8 44 7 64 0.81 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 UvrD-helicase PF00580.16 315 9.2e-17 54.9 3.9 2 2 6.8e-15 5.7e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_3 - 181 UvrD-helicase PF00580.16 315 0.00024 14.1 3.8 1 1 3.3e-06 0.00028 13.9 3.8 127 229 52 155 10 161 0.72 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 3_1 - 492 NACHT PF05729.7 166 2.4e-06 20.9 0.1 1 2 0.00046 0.078 6.3 0.0 3 20 33 50 31 63 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 NACHT PF05729.7 166 2.4e-06 20.9 0.1 2 2 7.1e-06 0.0012 12.2 0.0 3 24 325 346 323 394 0.84 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_25 PF13481.1 194 3.4e-05 17.0 0.0 1 2 0.029 1.2 2.1 0.0 37 54 34 51 30 72 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_25 PF13481.1 194 3.4e-05 17.0 0.0 2 2 5.7e-05 0.0024 10.9 0.0 29 54 318 343 294 423 0.76 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_77 - 816 AAA_25 PF13481.1 194 0.00058 12.9 0.0 1 1 3.4e-05 0.0014 11.6 0.0 36 86 454 494 447 532 0.82 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_114 - 262 AAA_25 PF13481.1 194 0.00066 12.7 0.0 1 1 2.4e-05 0.001 12.1 0.0 42 91 12 51 11 134 0.78 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_92 - 622 AAA_25 PF13481.1 194 0.00066 12.7 0.0 1 1 4.9e-05 0.0021 11.1 0.0 20 137 159 265 145 272 0.78 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 492 ABC_tran_2 PF12848.2 85 1.1e-13 44.6 16.1 1 1 2e-14 3.3e-12 39.8 16.1 1 85 167 283 167 283 0.93 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_28 PF13521.1 163 6.6e-05 16.6 4.3 1 2 0.023 3.9 1.0 0.0 2 20 33 51 32 66 0.84 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_28 PF13521.1 163 6.6e-05 16.6 4.3 2 2 5.6e-07 9.5e-05 16.0 0.1 1 34 324 359 324 391 0.79 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 AAA_5 PF07728.9 139 1.6e-18 60.4 0.0 1 1 1.6e-20 2.7e-18 59.7 0.0 2 125 64 188 63 197 0.94 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/895b6c7a-0a02-4442-80b4-9cfbd8eed854 # Target file: checkm_output/bins/pm1863/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1863/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/895b6c7a-0a02-4442-80b4-9cfbd8eed854 checkm_output/bins/pm1863/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:01:15 2020 # [ok]