# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_14 - 262 Mg_chelatase PF01078.16 207 0.00016 12.1 0.0 1 1 1.1e-05 0.00033 11.1 0.0 23 43 100 120 96 153 0.86 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 IstB_IS21 PF01695.12 178 9.6e-70 224.8 0.1 1 1 4.1e-71 1.3e-69 224.4 0.1 2 177 55 230 54 231 0.98 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_23 - 565 3HCDH_N PF02737.13 180 0.00099 10.0 6.4 1 2 0.0047 0.15 2.9 2.4 1 30 99 128 99 134 0.93 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 3HCDH_N PF02737.13 180 0.00099 10.0 6.4 2 2 9e-05 0.0028 8.6 0.1 2 39 272 309 271 348 0.73 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 GIDA PF01134.17 392 8e-09 26.0 6.6 1 3 3.5e-10 1.1e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 GIDA PF01134.17 392 8e-09 26.0 6.6 2 3 0.038 1.2 -0.9 0.0 3 31 273 301 271 315 0.84 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 GIDA PF01134.17 392 8e-09 26.0 6.6 3 3 0.018 0.57 0.1 0.1 349 385 393 429 387 433 0.77 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_1 - 257 Methyltransf_18 PF12847.2 112 0.00021 13.1 0.0 1 1 1.1e-05 0.00035 12.4 0.0 56 110 157 205 99 207 0.79 # 2 # 772 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.320 1_23 - 565 Pyr_redox_2 PF07992.9 201 2.5e-44 142.8 0.0 1 1 3.2e-45 1e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_16 - 269 AAA_22 PF13401.1 131 1e-17 55.8 0.0 1 1 1.1e-18 1.8e-17 55.0 0.0 7 126 46 172 41 176 0.94 # 16474 # 17280 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.657 1_14 - 262 AAA_22 PF13401.1 131 8.5e-07 20.5 0.1 1 2 5.5e-06 8.6e-05 14.0 0.2 2 28 97 123 96 159 0.74 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 AAA_22 PF13401.1 131 8.5e-07 20.5 0.1 2 2 0.0041 0.064 4.7 0.0 87 117 151 196 132 204 0.62 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_23 - 565 DFP PF04127.10 185 0.00024 12.0 2.4 1 2 0.00039 0.012 6.4 0.4 28 51 105 128 99 156 0.83 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 DFP PF04127.10 185 0.00024 12.0 2.4 2 2 0.0014 0.043 4.7 0.1 32 53 281 302 276 336 0.77 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_14 - 262 AAA_3 PF07726.6 131 0.00016 12.6 0.0 1 1 1.2e-05 0.00038 11.4 0.0 2 72 102 171 101 201 0.70 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_23 - 565 NAD_binding_7 PF13241.1 103 1.1e-07 23.4 1.2 1 2 5.4e-05 0.0017 9.9 0.2 9 38 99 128 96 184 0.89 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 NAD_binding_7 PF13241.1 103 1.1e-07 23.4 1.2 2 2 1.4e-05 0.00044 11.8 0.1 8 41 270 306 264 380 0.74 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_14 - 262 AAA_17 PF13207.1 121 3.4e-05 15.9 0.0 1 1 1.6e-06 4.9e-05 15.4 0.0 2 38 102 133 101 232 0.74 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 PhoH PF02562.11 205 3.9e-09 27.2 0.1 1 1 2.9e-10 9.1e-09 26.0 0.1 3 61 83 142 81 179 0.77 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 MCM PF00493.18 331 6.3e-05 13.1 0.0 1 2 7.5e-06 0.00023 11.2 0.0 56 120 98 162 82 172 0.81 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 MCM PF00493.18 331 6.3e-05 13.1 0.0 2 2 0.034 1.1 -0.8 0.0 161 211 190 237 186 259 0.71 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_23 - 565 NAD_binding_8 PF13450.1 68 1.1e-05 16.7 1.2 1 2 3.5e-07 1.1e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 NAD_binding_8 PF13450.1 68 1.1e-05 16.7 1.2 2 2 0.041 1.3 0.5 0.2 1 25 274 298 274 303 0.81 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 F420_oxidored PF03807.12 96 0.0022 9.7 4.1 1 2 0.0023 0.072 4.9 1.2 2 31 100 126 99 131 0.87 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 F420_oxidored PF03807.12 96 0.0022 9.7 4.1 2 2 0.0075 0.23 3.3 0.1 1 34 271 300 271 323 0.87 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_16 - 269 AAA_16 PF13191.1 185 4e-06 18.2 0.0 1 2 1.4e-05 0.00022 12.5 0.0 8 52 27 76 25 127 0.70 # 16474 # 17280 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.657 1_16 - 269 AAA_16 PF13191.1 185 4e-06 18.2 0.0 2 2 0.0074 0.12 3.6 0.0 139 183 116 166 98 168 0.72 # 16474 # 17280 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.657 1_14 - 262 AAA_16 PF13191.1 185 4.4e-05 14.7 0.1 1 1 6.8e-06 0.00011 13.5 0.1 23 51 98 126 84 166 0.79 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_23 - 565 HI0933_like PF03486.9 409 6.9e-09 25.8 3.7 1 2 1.2e-06 3.7e-05 13.5 2.5 2 33 99 130 98 138 0.91 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 HI0933_like PF03486.9 409 6.9e-09 25.8 3.7 2 2 7.2e-06 0.00022 10.9 0.0 82 164 284 366 276 385 0.83 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_14 - 262 AAA_29 PF13555.1 62 4.2e-06 17.5 0.0 1 1 2.8e-07 8.7e-06 16.5 0.0 5 47 80 125 78 136 0.83 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_23 - 565 FAD_binding_2 PF00890.19 417 1.3e-06 18.6 4.7 1 3 4.3e-08 1.3e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 FAD_binding_2 PF00890.19 417 1.3e-06 18.6 4.7 2 3 0.034 1.1 -0.8 0.1 143 204 311 369 297 388 0.72 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 FAD_binding_2 PF00890.19 417 1.3e-06 18.6 4.7 3 3 0.074 2.3 -1.9 0.0 376 402 388 408 377 424 0.82 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_14 - 262 AAA PF00004.24 132 3.2e-08 25.1 0.0 1 1 1.8e-09 5.5e-08 24.4 0.0 1 111 102 202 102 230 0.70 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 Bac_DnaA PF00308.13 219 4e-11 34.2 0.0 1 1 2.1e-12 6.4e-11 33.5 0.0 36 136 101 199 80 221 0.87 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_23 - 565 Pyr_redox_3 PF13738.1 203 4e-18 57.4 0.1 1 2 4.4e-14 1.4e-12 39.3 0.1 1 201 101 303 101 305 0.75 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 Pyr_redox_3 PF13738.1 203 4e-18 57.4 0.1 2 2 9e-07 2.8e-05 15.5 0.0 93 147 320 375 309 430 0.76 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_16 - 269 TniB PF05621.6 302 6.1e-188 614.0 5.7 1 1 2.2e-189 6.8e-188 613.8 5.7 19 285 1 267 1 268 1.00 # 16474 # 17280 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.657 1_14 - 262 AAA_33 PF13671.1 143 0.00011 13.3 0.2 1 1 8.9e-06 0.00028 12.1 0.2 2 36 102 142 102 255 0.67 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 KTI12 PF08433.5 270 5.4e-05 13.7 0.4 1 2 6.4e-05 0.002 8.6 0.0 4 81 102 172 101 174 0.68 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 KTI12 PF08433.5 270 5.4e-05 13.7 0.4 2 2 0.0037 0.11 2.8 0.1 34 59 232 257 212 261 0.77 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 DnaB_C PF03796.10 259 4.6e-05 13.6 0.0 1 1 2.4e-06 7.5e-05 12.9 0.0 16 55 96 135 85 158 0.90 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 AAA_30 PF13604.1 196 0.00015 12.7 0.2 1 2 1.4e-05 0.00043 11.1 0.1 16 49 97 131 87 162 0.73 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 AAA_30 PF13604.1 196 0.00015 12.7 0.2 2 2 0.069 2.2 -0.9 0.0 86 104 149 172 117 179 0.62 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_23 - 565 K_oxygenase PF13434.1 341 1.8e-06 18.3 0.0 1 3 0.0039 0.12 2.4 0.0 187 220 94 125 59 130 0.79 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 K_oxygenase PF13434.1 341 1.8e-06 18.3 0.0 2 3 3.3e-06 0.0001 12.5 0.0 132 231 218 308 202 332 0.82 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 K_oxygenase PF13434.1 341 1.8e-06 18.3 0.0 3 3 0.057 1.8 -1.4 0.0 132 160 346 369 314 377 0.67 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_14 - 262 RuvB_N PF05496.7 234 0.00016 12.0 0.0 1 1 7.1e-06 0.00022 11.5 0.0 48 75 97 124 45 170 0.84 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 AAA_19 PF13245.1 76 1.2e-07 22.8 0.0 1 1 9.7e-09 3e-07 21.4 0.0 11 37 101 126 95 147 0.81 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_23 - 565 FAD_oxidored PF12831.2 428 9.1e-07 19.4 3.6 1 1 2.9e-08 9.1e-07 19.4 3.6 2 41 100 138 99 167 0.83 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 DAO PF01266.19 358 1.3e-09 28.6 11.7 1 3 1.4e-08 4.2e-07 20.3 0.7 1 38 99 134 99 190 0.84 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 DAO PF01266.19 358 1.3e-09 28.6 11.7 2 3 0.032 0.98 -0.6 0.1 3 31 273 301 271 307 0.75 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 DAO PF01266.19 358 1.3e-09 28.6 11.7 3 3 9.4e-07 2.9e-05 14.3 0.5 152 208 314 372 307 433 0.74 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 NAD_binding_9 PF13454.1 156 8.8e-06 16.8 2.8 1 3 0.0081 0.25 2.3 0.1 1 41 101 135 101 162 0.81 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 NAD_binding_9 PF13454.1 156 8.8e-06 16.8 2.8 2 3 0.034 1 0.3 0.0 134 155 218 241 202 242 0.72 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 NAD_binding_9 PF13454.1 156 8.8e-06 16.8 2.8 3 3 6.6e-06 0.00021 12.4 0.1 112 155 321 366 311 367 0.85 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_14 - 262 DUF815 PF05673.8 250 6.9e-05 13.1 0.0 1 1 3.6e-06 0.00011 12.4 0.0 23 76 65 122 46 139 0.79 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_23 - 565 Pyr_redox PF00070.22 80 1.1e-20 65.1 6.0 1 2 1.4e-06 4.4e-05 15.2 1.5 1 31 99 129 99 131 0.96 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 Pyr_redox PF00070.22 80 1.1e-20 65.1 6.0 2 2 6.2e-18 1.9e-16 51.6 0.2 1 74 271 345 271 354 0.90 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_14 - 262 AAA_11 PF13086.1 236 0.00014 12.7 0.3 1 1 8.7e-06 0.00027 11.8 0.3 6 44 89 142 82 260 0.72 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 Sigma54_activ_2 PF14532.1 138 9.2e-05 13.8 0.1 1 1 7.7e-06 0.00024 12.4 0.0 3 44 79 122 77 151 0.81 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_16 - 269 AAA_32 PF13654.1 509 3.6e-05 13.8 0.1 1 2 5.8e-06 0.00018 11.4 0.0 8 81 16 94 8 106 0.86 # 16474 # 17280 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.657 1_16 - 269 AAA_32 PF13654.1 509 3.6e-05 13.8 0.1 2 2 0.019 0.58 -0.1 0.1 472 502 237 267 224 268 0.89 # 16474 # 17280 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.657 1_1 - 257 Methyltransf_23 PF13489.1 161 8.2e-05 13.6 0.0 1 1 4.2e-06 0.00013 13.0 0.0 30 148 101 237 75 238 0.71 # 2 # 772 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.320 1_23 - 565 AlaDh_PNT_C PF01262.16 168 7.4e-06 16.9 3.1 1 2 0.00051 0.016 6.0 0.8 15 50 92 127 89 130 0.90 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_23 - 565 AlaDh_PNT_C PF01262.16 168 7.4e-06 16.9 3.1 2 2 2.1e-05 0.00065 10.5 0.1 16 58 265 307 257 339 0.84 # 21669 # 23363 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_14 - 262 NACHT PF05729.7 166 0.00038 11.4 2.1 1 2 5.9e-05 0.0018 9.2 0.3 3 23 102 122 100 148 0.84 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 NACHT PF05729.7 166 0.00038 11.4 2.1 2 2 0.012 0.36 1.7 0.1 80 127 156 200 139 221 0.76 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 AAA_25 PF13481.1 194 3.4e-05 14.6 0.0 1 1 1.8e-06 5.6e-05 13.8 0.0 29 57 95 123 76 170 0.86 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_1 - 257 Spermine_synth PF01564.12 246 2e-05 14.9 0.1 1 1 1.1e-06 3.5e-05 14.1 0.1 143 206 162 221 156 240 0.82 # 2 # 772 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.320 1_14 - 262 AAA_28 PF13521.1 163 2.8e-06 18.6 1.1 1 1 4.6e-07 1.4e-05 16.3 0.8 1 24 101 124 101 239 0.90 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 262 AAA_5 PF07728.9 139 5.9e-05 14.1 0.2 1 1 4.3e-06 0.00013 12.9 0.2 1 19 101 119 101 243 0.78 # 14077 # 14862 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/3ca00893-273c-47b7-8579-c97f7385d3e6 # Target file: checkm_output/bins/pm1851/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1851/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3ca00893-273c-47b7-8579-c97f7385d3e6 checkm_output/bins/pm1851/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:01:06 2020 # [ok]