# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_22 - 170 Limkain-b1 PF11608.3 91 0.0005 12.8 0.1 1 1 8.7e-06 0.00093 12.0 0.1 16 70 90 144 80 151 0.89 # 15692 # 16201 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.524 3_9 - 258 Methyltransf_12 PF08242.7 99 5.9e-06 19.8 0.0 1 1 1.2e-07 1.2e-05 18.7 0.0 1 82 111 188 111 199 0.85 # 8706 # 9479 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 3_12 - 492 cobW PF02492.14 178 0.00028 13.3 1.3 1 2 0.01 0.55 2.6 0.0 3 19 33 49 31 59 0.87 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 cobW PF02492.14 178 0.00028 13.3 1.3 2 2 0.00012 0.0066 8.9 0.3 3 28 325 349 323 352 0.80 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 4_7 - 181 cobW PF02492.14 178 0.0009 11.7 0.0 1 1 2.6e-05 0.0014 11.1 0.0 2 22 2 22 1 30 0.79 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_27 - 145 SSB PF00436.20 104 2.6e-32 103.8 0.3 1 1 2.8e-34 3e-32 103.6 0.3 2 103 7 111 6 112 0.96 # 25113 # 25547 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.492 1_18 - 388 DUF87 PF01935.12 229 9.8e-05 15.2 0.0 1 1 3.6e-06 0.00019 14.2 0.0 28 45 157 174 155 188 0.89 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 3_12 - 492 DUF87 PF01935.12 229 0.015 8.1 11.6 1 3 0.0026 0.14 4.9 0.0 25 48 32 55 20 62 0.86 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 DUF87 PF01935.12 229 0.015 8.1 11.6 2 3 0.002 0.11 5.3 0.3 25 46 324 345 321 357 0.88 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 DUF87 PF01935.12 229 0.015 8.1 11.6 3 3 0.018 0.95 2.2 0.1 40 196 415 472 368 486 0.56 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_22 PF13401.1 131 1.9e-08 27.6 0.8 1 2 0.01 0.27 4.4 0.0 9 25 35 51 30 144 0.78 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_22 PF13401.1 131 1.9e-08 27.6 0.8 2 2 8.2e-08 2.2e-06 20.9 0.0 7 125 325 464 322 471 0.86 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_18 - 388 AAA_22 PF13401.1 131 3.1e-06 20.4 0.0 1 1 2.9e-07 7.6e-06 19.1 0.0 4 30 152 178 149 243 0.84 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 4_7 - 181 AAA_22 PF13401.1 131 1.8e-05 17.9 0.0 1 1 1.3e-06 3.5e-05 17.0 0.0 6 37 2 34 1 177 0.84 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_5 - 1017 AAA_22 PF13401.1 131 0.00021 14.4 0.0 1 1 2.7e-05 0.00072 12.7 0.0 8 73 492 561 486 594 0.70 # 4746 # 7796 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 1_18 - 388 ATP_bind_1 PF03029.12 238 0.00087 11.8 0.0 1 1 1.3e-05 0.0014 11.2 0.0 1 25 157 181 157 191 0.84 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 3_12 - 492 PRK PF00485.13 194 0.00031 13.3 0.2 1 2 0.0023 0.25 3.8 0.0 2 21 33 52 32 85 0.83 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 PRK PF00485.13 194 0.00031 13.3 0.2 2 2 0.00027 0.029 6.9 0.0 2 33 325 364 325 409 0.75 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 KAP_NTPase PF07693.9 325 0.00022 13.2 1.8 1 2 0.00056 0.059 5.3 0.0 23 47 33 57 26 143 0.77 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 KAP_NTPase PF07693.9 325 0.00022 13.2 1.8 2 2 0.00018 0.019 6.9 0.0 23 42 325 344 319 398 0.87 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_15 PF13175.1 415 4e-10 32.2 1.2 1 3 6e-05 0.0065 8.5 0.0 26 54 34 58 5 119 0.80 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_15 PF13175.1 415 4e-10 32.2 1.2 2 3 6.4e-06 0.00069 11.7 0.0 26 90 326 383 300 417 0.60 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_15 PF13175.1 415 4e-10 32.2 1.2 3 3 3.8e-05 0.0041 9.1 0.1 352 414 415 467 393 476 0.75 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 4_7 - 181 AAA_17 PF13207.1 121 6.5e-07 23.2 0.1 1 1 3.5e-08 1.2e-06 22.3 0.1 1 77 2 94 2 173 0.54 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 3_12 - 492 AAA_17 PF13207.1 121 9.6e-07 22.7 3.7 1 2 0.0069 0.25 5.2 0.4 1 20 32 51 32 195 0.85 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_17 PF13207.1 121 9.6e-07 22.7 3.7 2 2 9e-07 3.2e-05 17.8 0.1 1 52 324 379 324 486 0.80 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_5 - 1017 AAA_17 PF13207.1 121 5.4e-05 17.0 0.1 1 1 1.3e-05 0.00046 14.0 0.0 3 27 492 522 492 581 0.72 # 4746 # 7796 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 3_12 - 492 AAA_21 PF13304.1 303 2.1e-18 60.3 5.1 1 4 3.9e-07 4.2e-05 16.6 0.6 3 21 34 52 33 85 0.87 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_21 PF13304.1 303 2.1e-18 60.3 5.1 2 4 0.00027 0.029 7.2 0.0 237 303 100 160 91 160 0.84 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_21 PF13304.1 303 2.1e-18 60.3 5.1 3 4 4.9e-07 5.3e-05 16.2 0.0 3 43 326 361 325 384 0.76 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_21 PF13304.1 303 2.1e-18 60.3 5.1 4 4 6.8e-08 7.3e-06 19.1 0.0 233 301 405 467 386 469 0.89 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 Miro PF08477.8 119 4e-09 30.0 1.0 1 2 1.1e-05 0.00061 13.3 0.0 1 21 32 52 32 82 0.89 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 Miro PF08477.8 119 4e-09 30.0 1.0 2 2 6.8e-06 0.00036 14.0 0.0 1 25 324 348 324 392 0.72 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_18 - 388 Miro PF08477.8 119 0.001 12.6 0.0 1 1 4.3e-05 0.0023 11.5 0.0 4 28 157 186 156 220 0.72 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 3_12 - 492 MobB PF03205.9 140 5.3e-05 16.0 0.4 1 2 0.0031 0.16 4.7 0.0 2 20 32 50 31 61 0.86 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 MobB PF03205.9 140 5.3e-05 16.0 0.4 2 2 0.00015 0.0081 8.9 0.1 3 23 325 345 323 353 0.87 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_18 - 388 MobB PF03205.9 140 0.00054 12.7 0.0 1 1 2.1e-05 0.0011 11.7 0.0 4 25 156 177 154 190 0.85 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_18 - 388 T2SE PF00437.15 272 3.1e-23 75.0 0.0 1 1 4.6e-25 5e-23 74.3 0.0 11 269 24 303 15 306 0.78 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 4_7 - 181 Cytidylate_kin2 PF13189.1 179 0.0005 13.0 0.0 1 2 6.6e-05 0.007 9.3 0.0 1 23 2 24 2 46 0.78 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_7 - 181 Cytidylate_kin2 PF13189.1 179 0.0005 13.0 0.0 2 2 0.015 1.6 1.6 0.0 112 135 99 122 91 136 0.77 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_7 - 181 Zeta_toxin PF06414.7 201 4.8e-05 15.5 0.0 1 2 9.4e-06 0.0005 12.2 0.0 19 53 3 35 1 120 0.83 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_7 - 181 Zeta_toxin PF06414.7 201 4.8e-05 15.5 0.0 2 2 0.048 2.5 0.1 0.0 45 74 106 133 95 150 0.73 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 3_12 - 492 Zeta_toxin PF06414.7 201 5.5e-05 15.3 1.5 1 2 0.00049 0.026 6.6 0.0 21 40 35 54 30 63 0.87 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 Zeta_toxin PF06414.7 201 5.5e-05 15.3 1.5 2 2 0.00035 0.019 7.0 0.0 20 40 326 346 309 353 0.83 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 SMC_N PF02463.14 220 2.3e-10 33.0 6.8 1 4 0.00037 0.02 7.1 0.0 29 43 35 49 25 65 0.86 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 SMC_N PF02463.14 220 2.3e-10 33.0 6.8 2 4 0.00035 0.019 7.2 0.0 116 203 79 160 70 173 0.81 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 SMC_N PF02463.14 220 2.3e-10 33.0 6.8 3 4 0.00022 0.012 7.8 0.1 27 44 325 342 311 344 0.80 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 SMC_N PF02463.14 220 2.3e-10 33.0 6.8 4 4 1.6e-05 0.00084 11.6 0.2 117 211 382 478 359 485 0.81 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_18 - 388 SMC_N PF02463.14 220 0.0012 11.0 0.0 1 1 4.2e-05 0.0023 10.2 0.0 26 50 154 178 147 195 0.81 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 3_12 - 492 Arch_ATPase PF01637.13 234 0.00011 14.9 3.0 1 3 0.02 2.1 0.9 0.0 25 40 35 50 24 85 0.87 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 Arch_ATPase PF01637.13 234 0.00011 14.9 3.0 2 3 0.0083 0.89 2.1 0.7 53 104 181 237 166 267 0.65 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 Arch_ATPase PF01637.13 234 0.00011 14.9 3.0 3 3 3.2e-05 0.0035 10.0 0.0 24 68 326 374 323 473 0.69 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_16 PF13191.1 185 1e-05 18.6 0.1 1 2 0.00079 0.042 6.8 0.0 29 44 35 50 22 151 0.89 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_16 PF13191.1 185 1e-05 18.6 0.1 2 2 0.00014 0.0076 9.2 0.0 27 49 325 347 320 410 0.84 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_18 - 388 AAA_16 PF13191.1 185 0.00094 12.2 0.0 1 1 3.6e-05 0.0019 11.2 0.0 26 50 154 178 140 211 0.85 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 3_12 - 492 AAA_23 PF13476.1 202 5.3e-08 26.4 8.6 1 3 7.6e-05 0.0041 10.4 0.0 24 38 35 49 25 57 0.91 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_23 PF13476.1 202 5.3e-08 26.4 8.6 2 3 0.0066 0.35 4.1 1.4 141 177 187 244 105 280 0.58 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_23 PF13476.1 202 5.3e-08 26.4 8.6 3 3 3.8e-06 0.0002 14.7 0.4 22 39 325 342 288 343 0.76 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_18 - 388 AAA_23 PF13476.1 202 2.1e-06 21.2 0.1 1 1 8.3e-08 4.4e-06 20.1 0.0 19 44 152 177 140 226 0.87 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 4_7 - 181 AAA_18 PF13238.1 129 7.2e-11 35.5 0.0 1 1 3.6e-12 1.3e-10 34.7 0.0 1 126 3 134 3 137 0.71 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_5 - 1017 AAA_18 PF13238.1 129 9.1e-05 15.8 1.3 1 1 1.1e-05 0.00038 13.8 0.0 2 19 492 509 492 571 0.76 # 4746 # 7796 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 3_12 - 492 AAA_18 PF13238.1 129 0.001 12.4 8.3 1 2 0.0046 0.16 5.3 0.0 1 21 33 53 33 89 0.81 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_18 PF13238.1 129 0.001 12.4 8.3 2 2 0.0001 0.0037 10.6 0.6 1 23 325 354 325 475 0.80 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_18 - 388 KaiC PF06745.8 227 0.0009 11.4 0.0 1 1 1.5e-05 0.0016 10.6 0.0 14 59 147 191 137 201 0.76 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 4_7 - 181 AAA_14 PF13173.1 128 0.00063 12.7 0.0 1 1 1.1e-05 0.0012 11.7 0.0 4 27 2 25 1 54 0.79 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 3_12 - 492 AAA_29 PF13555.1 62 4.6e-08 25.5 0.5 1 2 1.9e-05 0.001 11.6 0.0 25 40 32 47 20 52 0.78 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_29 PF13555.1 62 4.6e-08 25.5 0.5 2 2 2.2e-05 0.0012 11.4 0.1 14 40 314 339 310 343 0.77 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_18 - 388 AAA_29 PF13555.1 62 9.5e-06 18.1 0.1 1 1 4.4e-07 2.4e-05 16.9 0.1 26 43 155 172 147 175 0.84 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 3_12 - 492 AAA PF00004.24 132 4.4e-05 16.7 0.1 1 2 0.0057 0.61 3.3 0.0 3 22 35 54 33 124 0.77 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA PF00004.24 132 4.4e-05 16.7 0.1 2 2 3.2e-05 0.0034 10.6 0.0 3 23 327 347 325 437 0.75 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 MMR_HSR1 PF01926.18 116 2e-06 20.8 4.1 1 2 2.2e-05 0.0023 10.9 0.1 1 27 32 92 32 178 0.52 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 MMR_HSR1 PF01926.18 116 2e-06 20.8 4.1 2 2 4.9e-05 0.0053 9.8 0.7 1 99 324 473 324 488 0.56 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 DUF258 PF03193.11 161 8.3e-09 27.8 0.1 1 2 2e-07 2.1e-05 16.7 0.0 39 95 34 126 15 136 0.87 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 DUF258 PF03193.11 161 8.3e-09 27.8 0.1 2 2 6.4e-05 0.0069 8.6 0.0 38 67 325 352 302 391 0.77 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_18 - 388 Ribosomal_S5 PF00333.15 67 3.2e-05 16.7 0.1 1 2 0.00091 0.097 5.5 0.0 26 45 84 103 76 114 0.83 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_18 - 388 Ribosomal_S5 PF00333.15 67 3.2e-05 16.7 0.1 2 2 0.00012 0.012 8.4 0.0 21 54 242 274 230 278 0.91 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 2_21 - 696 TraG-D_C PF12696.2 128 0.00015 14.7 0.1 1 1 2.4e-06 0.00025 13.9 0.1 3 94 437 524 435 556 0.78 # 13557 # 15644 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 3_12 - 492 NTPase_1 PF03266.10 168 8.9e-05 15.2 2.1 1 2 0.044 4.7 -0.1 0.0 1 19 32 50 32 62 0.83 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 NTPase_1 PF03266.10 168 8.9e-05 15.2 2.1 2 2 1.7e-05 0.0018 11.0 1.0 1 26 324 349 324 490 0.62 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 4_7 - 181 AAA_33 PF13671.1 143 6.1e-11 35.4 0.0 1 1 1.5e-12 7.8e-11 35.0 0.0 2 127 3 130 2 151 0.75 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 3_12 - 492 AAA_33 PF13671.1 143 0.0007 12.5 0.1 1 2 0.017 0.91 2.4 0.0 4 19 35 50 33 121 0.83 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_33 PF13671.1 143 0.0007 12.5 0.1 2 2 0.00051 0.027 7.3 0.0 3 33 326 356 325 398 0.77 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_9 - 258 FmrO PF07091.6 251 4.4e-85 277.6 0.0 1 1 4.7e-87 5e-85 277.4 0.0 1 251 12 251 12 251 0.99 # 8706 # 9479 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 3_12 - 492 AAA_30 PF13604.1 196 3.4e-05 16.5 1.7 1 2 0.0022 0.23 4.0 0.0 18 39 31 51 25 61 0.81 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_30 PF13604.1 196 3.4e-05 16.5 1.7 2 2 2.4e-05 0.0025 10.4 0.0 21 133 325 467 321 469 0.59 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_9 - 258 TehB PF03848.9 192 0.00083 11.5 2.3 1 1 3.7e-06 0.00039 12.6 0.2 32 112 108 190 66 207 0.86 # 8706 # 9479 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_18 - 388 FtsK_SpoIIIE PF01580.13 205 0.00011 14.8 0.0 1 1 1.9e-06 0.0002 13.8 0.0 41 59 155 173 129 184 0.85 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 3_9 - 258 MTS PF05175.9 170 4.1e-06 19.3 0.0 1 1 7.2e-08 7.7e-06 18.4 0.0 33 103 108 177 99 195 0.88 # 8706 # 9479 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 3_12 - 492 Dynamin_N PF00350.18 168 0.011 8.5 17.3 1 2 0.0077 0.82 2.4 11.6 1 86 33 234 33 305 0.68 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 Dynamin_N PF00350.18 168 0.011 8.5 17.3 2 2 0.00049 0.052 6.3 0.3 1 111 325 437 325 487 0.51 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 ABC_tran PF00005.22 137 3.6e-31 101.3 8.0 1 4 1.1e-09 6e-08 26.1 0.1 5 37 24 56 20 66 0.85 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 ABC_tran PF00005.22 137 3.6e-31 101.3 8.0 2 4 2.1e-07 1.1e-05 18.7 0.0 101 137 94 128 73 128 0.79 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 ABC_tran PF00005.22 137 3.6e-31 101.3 8.0 3 4 0.082 4.4 0.6 0.5 51 102 203 255 163 276 0.46 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 ABC_tran PF00005.22 137 3.6e-31 101.3 8.0 4 4 6.3e-19 3.4e-17 56.0 0.1 2 136 313 436 312 437 0.81 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_18 - 388 ABC_tran PF00005.22 137 0.00015 15.1 0.0 1 1 5.3e-06 0.00028 14.2 0.0 16 33 157 174 149 217 0.83 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 4_7 - 181 TIGR03263 TIGR03263 180 0.00077 11.8 0.0 1 1 1.6e-05 0.0017 10.7 0.0 3 26 2 25 1 31 0.81 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 3_12 - 492 ATP-synt_ab PF00006.20 215 2.2e-05 17.0 0.1 1 2 0.044 4.8 -0.4 0.0 17 34 32 49 28 55 0.88 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 ATP-synt_ab PF00006.20 215 2.2e-05 17.0 0.1 2 2 1.5e-06 0.00016 14.2 0.1 7 66 314 380 307 402 0.80 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_19 PF13245.1 76 0.00018 14.3 0.1 1 1 2.2e-05 0.00078 12.2 0.0 10 48 323 360 317 370 0.75 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 4_7 - 181 AAA_19 PF13245.1 76 0.00025 13.8 0.0 1 1 2.5e-05 0.00088 12.1 0.0 15 33 5 22 2 38 0.84 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_5 - 1017 AAA_19 PF13245.1 76 0.00055 12.7 0.0 1 1 4.8e-05 0.0017 11.1 0.0 14 31 492 508 481 518 0.90 # 4746 # 7796 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 1_5 - 1017 AAA_10 PF12846.2 304 9.3e-41 133.1 0.0 1 1 7.3e-42 1.9e-40 132.1 0.0 5 297 492 884 489 889 0.91 # 4746 # 7796 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 2_21 - 696 AAA_10 PF12846.2 304 6.7e-10 31.8 0.0 1 1 3.7e-11 1e-09 31.2 0.0 2 292 134 503 133 514 0.76 # 13557 # 15644 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 1_18 - 388 AAA_10 PF12846.2 304 1.5e-06 20.8 0.0 1 1 3.3e-07 8.9e-06 18.3 0.0 3 27 154 178 152 196 0.74 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 3_12 - 492 AAA_10 PF12846.2 304 4.7e-05 15.9 4.7 1 2 0.0027 0.073 5.4 0.0 6 22 35 51 33 67 0.80 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_10 PF12846.2 304 4.7e-05 15.9 4.7 2 2 6.8e-05 0.0018 10.7 0.5 4 118 325 478 322 489 0.76 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_9 - 258 Methyltransf_31 PF13847.1 152 0.00034 13.2 0.2 1 2 0.093 10 -1.3 0.0 95 98 39 42 7 89 0.58 # 8706 # 9479 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 3_9 - 258 Methyltransf_31 PF13847.1 152 0.00034 13.2 0.2 2 2 8.4e-06 0.00089 11.9 0.0 5 83 108 182 104 231 0.78 # 8706 # 9479 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 3_12 - 492 DUF3584 PF12128.3 1201 0.0077 6.5 13.2 1 3 0.002 0.21 1.7 0.0 13 36 26 49 22 50 0.84 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 DUF3584 PF12128.3 1201 0.0077 6.5 13.2 2 3 0.0047 0.5 0.5 7.1 629 703 191 268 173 301 0.38 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 DUF3584 PF12128.3 1201 0.0077 6.5 13.2 3 3 8.7e-05 0.0093 6.2 0.3 19 37 324 342 318 343 0.88 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_5 - 1017 DUF2075 PF09848.4 352 0.00037 12.5 0.0 1 1 1.1e-05 0.0012 10.8 0.0 5 22 492 509 489 537 0.87 # 4746 # 7796 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 3_12 - 492 PduV-EutP PF10662.4 143 2.7e-06 19.9 1.2 1 3 8e-05 0.0085 8.6 0.0 3 31 32 60 30 100 0.90 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 PduV-EutP PF10662.4 143 2.7e-06 19.9 1.2 2 3 0.00051 0.054 6.0 0.1 3 23 324 344 322 352 0.89 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 PduV-EutP PF10662.4 143 2.7e-06 19.9 1.2 3 3 0.0082 0.87 2.1 0.0 40 72 431 463 420 484 0.69 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 DUF815 PF05673.8 250 2.7e-05 16.2 0.2 1 2 0.00013 0.014 7.3 0.0 58 77 35 54 27 63 0.85 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 DUF815 PF05673.8 250 2.7e-05 16.2 0.2 2 2 0.00031 0.033 6.0 0.0 55 76 324 345 315 351 0.85 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_37 - 287 Methyltransf_27 PF13708.1 194 6.5e-69 224.3 0.0 1 1 1e-70 1.1e-68 223.6 0.0 2 194 89 282 88 282 0.98 # 29215 # 30075 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_21 - 696 TrwB_AAD_bind PF10412.4 386 2e-06 19.6 0.9 1 3 1.7e-05 0.0018 9.8 0.0 16 36 134 154 125 158 0.88 # 13557 # 15644 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 2_21 - 696 TrwB_AAD_bind PF10412.4 386 2e-06 19.6 0.9 2 3 9.3e-05 0.0099 7.4 0.1 93 140 235 281 229 303 0.80 # 13557 # 15644 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 2_21 - 696 TrwB_AAD_bind PF10412.4 386 2e-06 19.6 0.9 3 3 0.083 8.8 -2.3 0.0 293 323 482 512 405 546 0.58 # 13557 # 15644 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 3_9 - 258 Methyltransf_23 PF13489.1 161 8.8e-06 18.5 0.0 1 1 1.2e-07 1.2e-05 18.0 0.0 9 93 93 187 85 237 0.73 # 8706 # 9479 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_18 - 388 GTP_EFTU PF00009.22 188 0.0011 11.4 0.0 1 1 2e-05 0.0021 10.5 0.0 8 34 157 183 155 195 0.87 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 4_7 - 181 RNA_helicase PF00910.17 107 0.00062 13.0 0.0 1 1 2.7e-05 0.00097 12.3 0.0 1 26 3 28 3 47 0.84 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 3_12 - 492 RNA_helicase PF00910.17 107 0.00072 12.8 0.2 1 2 0.0099 0.35 4.1 0.0 3 22 35 54 33 65 0.83 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 RNA_helicase PF00910.17 107 0.00072 12.8 0.2 2 2 0.0027 0.098 5.9 0.0 2 22 326 346 325 380 0.79 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_18 - 388 RNA_helicase PF00910.17 107 0.0012 12.1 0.0 1 1 7.4e-05 0.0026 10.9 0.0 3 26 157 180 156 197 0.81 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 4_7 - 181 UPF0079 PF02367.12 123 0.00022 13.9 0.0 1 1 6.6e-06 0.00035 13.2 0.0 17 36 2 21 1 30 0.88 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 3_12 - 492 UPF0079 PF02367.12 123 0.00044 12.9 0.1 1 2 0.0035 0.19 4.4 0.0 18 36 33 51 26 60 0.85 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 UPF0079 PF02367.12 123 0.00044 12.9 0.1 2 2 0.0013 0.067 5.8 0.0 14 39 321 346 312 357 0.83 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_24 PF13479.1 213 4e-05 16.2 3.2 1 2 0.0014 0.072 5.6 0.0 8 38 35 64 30 111 0.76 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_24 PF13479.1 213 4e-05 16.2 3.2 2 2 4.3e-05 0.0023 10.5 0.1 4 23 323 342 321 356 0.86 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 4_7 - 181 AAA_24 PF13479.1 213 7.7e-05 15.3 0.0 1 1 2.8e-06 0.00015 14.4 0.0 6 33 3 34 1 73 0.90 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 3_14 - 181 UvrD-helicase PF00580.16 315 0.00015 14.1 3.8 1 1 1.7e-06 0.00018 13.9 3.8 127 229 52 155 10 161 0.72 # 14552 # 15094 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 3_12 - 492 NACHT PF05729.7 166 1.5e-06 20.9 0.1 1 2 0.0014 0.05 6.3 0.0 3 20 33 50 31 63 0.86 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 NACHT PF05729.7 166 1.5e-06 20.9 0.1 2 2 2.1e-05 0.00076 12.2 0.0 3 24 325 346 323 394 0.84 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 4_7 - 181 NACHT PF05729.7 166 1.6e-05 17.6 0.0 1 1 2.3e-06 8.2e-05 15.3 0.0 2 22 2 22 1 37 0.89 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_18 - 388 NACHT PF05729.7 166 0.00036 13.2 0.0 1 1 2e-05 0.00071 12.3 0.0 4 29 156 181 154 188 0.83 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_18 - 388 AAA_25 PF13481.1 194 6.2e-06 18.7 0.0 1 1 2.6e-07 1.4e-05 17.6 0.0 24 53 143 172 120 178 0.86 # 18186 # 19349 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 3_12 - 492 AAA_25 PF13481.1 194 2.1e-05 17.0 0.0 1 2 0.015 0.78 2.1 0.0 37 54 34 51 30 72 0.81 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_25 PF13481.1 194 2.1e-05 17.0 0.0 2 2 2.8e-05 0.0015 10.9 0.0 29 54 318 343 294 423 0.76 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 ABC_tran_2 PF12848.2 85 6.8e-14 44.6 16.1 1 1 2e-14 2.1e-12 39.8 16.1 1 85 167 283 167 283 0.93 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_28 PF13521.1 163 4.2e-05 16.6 4.3 1 2 0.046 2.5 1.0 0.0 2 20 33 51 32 66 0.84 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_12 - 492 AAA_28 PF13521.1 163 4.2e-05 16.6 4.3 2 2 1.1e-06 6e-05 16.0 0.1 1 34 324 359 324 391 0.79 # 11778 # 13253 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 4_7 - 181 AAA_28 PF13521.1 163 0.00015 14.8 0.0 1 1 5.8e-06 0.00031 13.7 0.0 2 30 3 34 2 165 0.89 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_7 - 181 APS_kinase PF01583.15 157 1.5e-05 17.7 0.0 1 2 7.3e-06 0.00078 12.1 0.0 4 24 2 22 1 35 0.87 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_7 - 181 APS_kinase PF01583.15 157 1.5e-05 17.7 0.0 2 2 0.0032 0.35 3.5 0.1 34 73 107 148 95 160 0.86 # 7868 # 8410 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/07f6a0d5-4432-4bff-9337-64a44951fe22 # Target file: checkm_output/bins/pm1850/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1850/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/07f6a0d5-4432-4bff-9337-64a44951fe22 checkm_output/bins/pm1850/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:01:08 2020 # [ok]