# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 305 UPF0020 PF01170.13 180 4.2e-07 18.8 0.0 1 2 0.0047 0.033 2.9 0.0 103 120 29 46 3 54 0.74 # 6607 # 7521 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.376 1_5 - 305 UPF0020 PF01170.13 180 4.2e-07 18.8 0.0 2 2 2.1e-06 1.5e-05 13.8 0.0 19 78 252 299 240 304 0.77 # 6607 # 7521 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.376 1_5 - 305 N6_N4_Mtase PF01555.13 231 3.5e-52 166.3 0.0 1 1 7e-53 4.9e-52 165.8 0.0 2 230 34 299 33 300 0.91 # 6607 # 7521 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.376 1_5 - 305 N6_Mtase PF02384.11 311 2.6e-05 12.5 0.0 1 2 0.067 0.47 -1.5 0.0 104 159 13 68 7 74 0.55 # 6607 # 7521 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.376 1_5 - 305 N6_Mtase PF02384.11 311 2.6e-05 12.5 0.0 2 2 1.3e-05 9.1e-05 10.7 0.0 31 66 246 280 234 291 0.85 # 6607 # 7521 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.376 1_5 - 305 Methyltransf_26 PF13659.1 117 4.3e-12 35.3 0.0 1 2 1.1e-05 7.6e-05 11.9 0.0 53 114 15 119 6 122 0.84 # 6607 # 7521 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.376 1_5 - 305 Methyltransf_26 PF13659.1 117 4.3e-12 35.3 0.0 2 2 1.4e-08 9.9e-08 21.3 0.0 2 39 262 298 261 304 0.88 # 6607 # 7521 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.376 1_5 - 305 MethyltransfD12 PF02086.10 260 1.5e-05 13.7 0.0 1 1 3.7e-06 2.6e-05 12.9 0.0 16 55 257 295 247 303 0.80 # 6607 # 7521 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.376 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/664b65d3-2ec8-43cc-8b86-ddc4290e3c74 # Target file: checkm_output/bins/pm1840/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1840/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/664b65d3-2ec8-43cc-8b86-ddc4290e3c74 checkm_output/bins/pm1840/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:00:58 2020 # [ok]