# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 72 Ribosomal_S13 PF00416.17 107 4.5e-05 13.3 1.9 1 1 6.9e-06 5.5e-05 13.0 1.9 26 81 12 67 3 69 0.90 # 689 # 904 # -1 # ID=1_2;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.444 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/2020bc2f-dff6-4ed7-8a3b-2ed36bc3f21c # Target file: checkm_output/bins/pm1797/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1797/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/2020bc2f-dff6-4ed7-8a3b-2ed36bc3f21c checkm_output/bins/pm1797/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:00:34 2020 # [ok]