# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_10 - 156 NAD_binding_3 PF03447.11 117 7.1e-05 13.4 0.3 1 1 9.8e-06 0.00014 12.5 0.2 11 87 14 88 10 114 0.83 # 7955 # 8422 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.620 1_12 - 596 DUF927 PF06048.6 286 6.1e-40 127.3 0.0 1 1 6.5e-41 9.2e-40 126.7 0.0 8 283 41 321 35 324 0.86 # 9410 # 11197 # -1 # ID=1_12;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.607 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/f47165b3-c82b-48d5-bdfe-5d21b79f0e86 # Target file: checkm_output/bins/pm179/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm179/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/f47165b3-c82b-48d5-bdfe-5d21b79f0e86 checkm_output/bins/pm179/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:00:32 2020 # [ok]