# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_50 - 488 Mg_chelatase PF01078.16 207 0.0013 12.0 0.1 1 1 1.1e-05 0.0026 11.0 0.1 1 47 215 267 215 281 0.79 # 34808 # 36271 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_21 - 318 ATP_bind_3 PF01171.15 182 0.00022 14.8 0.0 1 2 4.1e-05 0.0093 9.5 0.0 1 59 52 110 52 130 0.78 # 18201 # 19154 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_21 - 318 ATP_bind_3 PF01171.15 182 0.00022 14.8 0.0 2 2 0.004 0.91 3.0 0.0 134 161 232 260 206 262 0.73 # 18201 # 19154 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 3_2 - 292 Seryl_tRNA_N PF02403.17 108 0.021 9.0 13.5 1 4 0.04 4.6 1.4 0.1 57 104 11 59 2 63 0.69 # 827 # 1702 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 3_2 - 292 Seryl_tRNA_N PF02403.17 108 0.021 9.0 13.5 2 4 0.011 1.2 3.3 0.8 39 96 39 107 17 111 0.52 # 827 # 1702 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 3_2 - 292 Seryl_tRNA_N PF02403.17 108 0.021 9.0 13.5 3 4 0.00097 0.11 6.6 0.1 27 59 90 122 75 144 0.84 # 827 # 1702 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 3_2 - 292 Seryl_tRNA_N PF02403.17 108 0.021 9.0 13.5 4 4 0.00052 0.06 7.5 1.6 17 107 162 251 155 252 0.76 # 827 # 1702 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 1_2 - 347 Seryl_tRNA_N PF02403.17 108 0.059 7.5 46.3 1 5 0.038 4.3 1.5 8.8 39 98 89 152 77 158 0.72 # 223 # 1263 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_2 - 347 Seryl_tRNA_N PF02403.17 108 0.059 7.5 46.3 2 5 0.0017 0.19 5.9 3.1 50 100 146 196 143 199 0.89 # 223 # 1263 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_2 - 347 Seryl_tRNA_N PF02403.17 108 0.059 7.5 46.3 3 5 5.2e-06 0.00059 13.9 12.2 19 100 216 294 201 297 0.85 # 223 # 1263 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_2 - 347 Seryl_tRNA_N PF02403.17 108 0.059 7.5 46.3 4 5 0.00061 0.07 7.3 2.1 62 105 284 327 282 330 0.90 # 223 # 1263 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_2 - 347 Seryl_tRNA_N PF02403.17 108 0.059 7.5 46.3 5 5 0.012 1.3 3.1 1.6 82 105 304 327 296 345 0.51 # 223 # 1263 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_69 - 262 MipZ PF09140.6 261 4.1e-10 33.2 0.0 1 2 1.3e-09 1.5e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 45307 # 46092 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_69 - 262 MipZ PF09140.6 261 4.1e-10 33.2 0.0 2 2 0.00063 0.072 6.2 0.0 89 122 117 150 89 166 0.74 # 45307 # 46092 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 3_14 - 402 MipZ PF09140.6 261 4.3e-06 20.0 0.0 1 2 0.0053 0.61 3.1 0.0 3 50 111 163 109 193 0.73 # 10419 # 11624 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 3_14 - 402 MipZ PF09140.6 261 4.3e-06 20.0 0.0 2 2 1.7e-06 0.0002 14.6 0.0 87 136 233 282 220 296 0.87 # 10419 # 11624 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 4_4 - 301 3HCDH_N PF02737.13 180 6.3e-07 23.3 0.8 1 1 2.4e-08 2.7e-06 21.2 0.8 1 40 6 45 6 116 0.92 # 2677 # 3579 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.641 2_6 - 565 3HCDH_N PF02737.13 180 0.0065 10.2 6.4 1 2 0.0095 1.1 2.9 2.4 1 30 99 128 99 134 0.93 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 3HCDH_N PF02737.13 180 0.0065 10.2 6.4 2 2 0.00018 0.021 8.6 0.1 2 39 272 309 271 348 0.73 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 GIDA PF01134.17 392 5.8e-08 26.0 6.6 1 3 3.5e-10 7.9e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 GIDA PF01134.17 392 5.8e-08 26.0 6.6 2 3 0.038 8.7 -0.9 0.0 3 31 273 301 271 315 0.84 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 GIDA PF01134.17 392 5.8e-08 26.0 6.6 3 3 0.018 4.2 0.1 0.1 349 385 393 429 387 433 0.77 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_122 - 176 SSB PF00436.20 104 2.8e-41 133.7 0.3 1 1 1.5e-43 3.5e-41 133.4 0.3 1 104 5 109 5 109 0.99 # 92089 # 92616 # 1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.544 1_4 - 504 UvrD_C_2 PF13538.1 104 1.7e-10 35.0 0.0 1 1 3.5e-12 8e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_6 - 565 Pyr_redox_2 PF07992.9 201 1.8e-43 142.8 0.0 1 1 3.2e-45 7.4e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_50 - 488 AAA_2 PF07724.9 171 8.1e-06 19.9 0.0 1 1 1.9e-07 4.5e-05 17.5 0.0 6 92 245 325 240 333 0.90 # 34808 # 36271 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_92 - 622 DUF87 PF01935.12 229 1.7e-08 28.6 0.1 1 1 3.3e-10 3.8e-08 27.5 0.1 24 63 173 211 168 379 0.87 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_108 - 816 DUF87 PF01935.12 229 6.2e-08 26.8 0.2 1 1 1.1e-09 1.3e-07 25.7 0.2 24 167 452 591 432 654 0.69 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_4 - 504 AAA_22 PF13401.1 131 7.5e-05 17.0 0.0 1 2 0.00011 0.0061 10.8 0.0 8 68 23 92 17 122 0.63 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_4 - 504 AAA_22 PF13401.1 131 7.5e-05 17.0 0.0 2 2 0.02 1.1 3.4 0.0 82 124 189 225 164 229 0.77 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_120 - 323 AAA_22 PF13401.1 131 0.00028 15.1 0.0 1 1 1e-05 0.00059 14.1 0.0 5 54 62 103 56 164 0.76 # 90138 # 91106 # 1 # ID=1_120;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 622 AAA_22 PF13401.1 131 0.00029 15.1 0.0 1 1 1.7e-05 0.00095 13.4 0.0 3 68 171 231 166 287 0.83 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_50 - 488 AAA_22 PF13401.1 131 0.0011 13.2 1.1 1 1 0.0012 0.068 7.4 0.8 69 121 283 344 243 354 0.66 # 34808 # 36271 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_6 - 565 DFP PF04127.10 185 0.0019 11.9 2.4 1 2 0.00039 0.09 6.4 0.4 28 51 105 128 99 156 0.83 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 DFP PF04127.10 185 0.0019 11.9 2.4 2 2 0.0014 0.31 4.7 0.1 32 53 281 302 276 336 0.77 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_139 - 542 DNA_methylase PF00145.12 335 1.4e-28 94.0 0.0 1 1 6.3e-30 7.2e-28 91.7 0.0 3 333 126 441 124 443 0.77 # 104009 # 105634 # 1 # ID=1_139;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_80 - 476 DNA_methylase PF00145.12 335 2.4e-10 34.1 0.0 1 2 4.1e-11 4.7e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 51470 # 52897 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_80 - 476 DNA_methylase PF00145.12 335 2.4e-10 34.1 0.0 2 2 0.011 1.3 2.1 0.0 290 330 407 448 343 452 0.74 # 51470 # 52897 # 1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_120 - 323 AAA_3 PF07726.6 131 0.00016 15.4 0.0 1 1 1.1e-06 0.00025 14.7 0.0 3 114 65 188 63 212 0.80 # 90138 # 91106 # 1 # ID=1_120;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 4_8 - 382 AAA_15 PF13175.1 415 6.3e-11 36.0 0.0 1 2 4.3e-08 1e-05 18.8 0.1 1 44 21 62 21 87 0.87 # 6070 # 7215 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.592 4_8 - 382 AAA_15 PF13175.1 415 6.3e-11 36.0 0.0 2 2 5.3e-07 0.00012 15.2 0.0 372 414 315 355 293 356 0.93 # 6070 # 7215 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.592 2_6 - 565 NAD_binding_7 PF13241.1 103 7.7e-07 23.4 1.2 1 2 5.4e-05 0.012 9.9 0.2 9 38 99 128 96 184 0.89 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 NAD_binding_7 PF13241.1 103 7.7e-07 23.4 1.2 2 2 1.4e-05 0.0032 11.8 0.1 8 41 270 306 264 380 0.74 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_66 - 415 N6_N4_Mtase PF01555.13 231 1.3e-24 81.0 0.0 1 1 1.8e-26 2.1e-24 80.3 0.0 1 228 129 389 129 392 0.81 # 43133 # 44377 # 1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_130 - 295 N6_N4_Mtase PF01555.13 231 9.2e-09 29.2 0.1 1 2 3.4e-06 0.00039 14.0 0.0 180 223 28 72 4 76 0.84 # 99997 # 100881 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.510 1_130 - 295 N6_N4_Mtase PF01555.13 231 9.2e-09 29.2 0.1 2 2 7e-06 0.00081 13.0 0.1 2 172 90 267 89 283 0.72 # 99997 # 100881 # 1 # ID=1_130;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.510 1_120 - 323 AAA_17 PF13207.1 121 5.8e-05 18.0 0.0 1 1 1.1e-06 0.00013 16.9 0.0 3 27 65 89 64 166 0.90 # 90138 # 91106 # 1 # ID=1_120;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_50 - 488 AAA_17 PF13207.1 121 0.00029 15.8 0.0 1 1 1.3e-05 0.0014 13.5 0.0 2 63 245 299 245 388 0.63 # 34808 # 36271 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 4_8 - 382 AAA_21 PF13304.1 303 3.4e-26 86.9 0.1 1 1 1.2e-27 2.8e-25 83.9 0.1 1 301 42 355 42 357 0.86 # 6070 # 7215 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.592 1_92 - 622 MobB PF03205.9 140 0.0012 12.6 0.0 1 1 1.7e-05 0.004 10.9 0.0 4 34 176 206 175 214 0.90 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_69 - 262 ArsA_ATPase PF02374.10 305 1.3e-05 18.4 0.0 1 2 3e-07 6.9e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 45307 # 46092 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_69 - 262 ArsA_ATPase PF02374.10 305 1.3e-05 18.4 0.0 2 2 0.029 6.6 -0.3 0.0 124 136 124 136 106 143 0.79 # 45307 # 46092 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_4 - 504 PhoH PF02562.11 205 5.9e-06 19.7 0.2 1 2 0.0013 0.3 4.3 0.0 22 45 22 45 4 61 0.78 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_4 - 504 PhoH PF02562.11 205 5.9e-06 19.7 0.2 2 2 7.5e-06 0.0017 11.7 0.0 122 168 196 240 193 255 0.83 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_120 - 323 T2SE PF00437.15 272 8e-05 15.7 0.0 1 1 1.6e-06 0.00019 14.5 0.0 105 148 40 81 9 100 0.77 # 90138 # 91106 # 1 # ID=1_120;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 622 T2SE PF00437.15 272 0.00042 13.3 0.0 1 1 5.9e-06 0.00067 12.6 0.0 116 162 163 206 124 227 0.78 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_50 - 488 Zeta_toxin PF06414.7 201 0.00038 13.6 0.0 1 1 3.1e-06 0.00072 12.7 0.0 18 52 244 277 239 314 0.90 # 34808 # 36271 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_6 - 565 NAD_binding_8 PF13450.1 68 8e-05 16.7 1.2 1 2 3.5e-07 8e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 NAD_binding_8 PF13450.1 68 8e-05 16.7 1.2 2 2 0.041 9.4 0.5 0.2 1 25 274 298 274 303 0.81 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 4_4 - 301 F420_oxidored PF03807.12 96 7.2e-06 20.5 0.6 1 1 2e-07 2.3e-05 18.9 0.2 2 78 7 79 6 98 0.82 # 2677 # 3579 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.641 2_6 - 565 F420_oxidored PF03807.12 96 0.016 9.8 4.1 1 2 0.0047 0.53 4.9 1.2 2 31 100 126 99 131 0.87 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 F420_oxidored PF03807.12 96 0.016 9.8 4.1 2 2 0.015 1.7 3.3 0.1 1 34 271 300 271 323 0.87 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 4_8 - 382 SMC_N PF02463.14 220 2.8e-15 50.2 0.0 1 2 8.1e-13 1.9e-10 34.4 0.0 1 51 20 66 20 79 0.88 # 6070 # 7215 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.592 4_8 - 382 SMC_N PF02463.14 220 2.8e-15 50.2 0.0 2 2 1.4e-06 0.00032 14.0 0.0 136 203 292 357 129 364 0.78 # 6070 # 7215 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.592 1_21 - 318 TIGR02432 TIGR02432 189 6.1e-05 16.8 0.1 1 2 8.4e-06 0.0019 11.9 0.0 1 58 52 109 52 119 0.85 # 18201 # 19154 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_21 - 318 TIGR02432 TIGR02432 189 6.1e-05 16.8 0.1 2 2 0.007 1.6 2.4 0.0 140 165 235 260 209 262 0.76 # 18201 # 19154 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_120 - 323 Arch_ATPase PF01637.13 234 9.6e-05 16.2 0.0 1 1 7e-07 0.00016 15.5 0.0 4 44 45 85 43 94 0.91 # 90138 # 91106 # 1 # ID=1_120;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_120 - 323 AAA_16 PF13191.1 185 5.5e-05 17.3 0.8 1 1 2.2e-06 0.00017 15.7 0.0 7 48 47 85 42 102 0.79 # 90138 # 91106 # 1 # ID=1_120;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_108 - 816 AAA_16 PF13191.1 185 6.9e-05 17.0 0.2 1 1 4.8e-06 0.00036 14.6 0.2 20 62 447 489 439 648 0.64 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_84 - 206 AAA_16 PF13191.1 185 9.7e-05 16.5 0.1 1 1 1.9e-06 0.00014 15.9 0.1 27 68 11 54 3 168 0.79 # 54071 # 54688 # 1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 4_8 - 382 AAA_23 PF13476.1 202 7.1e-12 40.1 0.0 1 1 3.9e-14 9e-12 39.8 0.0 2 53 24 74 23 185 0.89 # 6070 # 7215 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.592 4_8 - 382 AAA_13 PF13166.1 712 0.0014 11.2 0.0 1 1 2.6e-05 0.002 10.7 0.0 14 36 38 60 26 73 0.79 # 6070 # 7215 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.592 3_2 - 292 AAA_13 PF13166.1 712 0.002 10.7 18.3 1 2 6.4e-05 0.0049 9.4 3.4 365 471 17 125 5 133 0.60 # 827 # 1702 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 3_2 - 292 AAA_13 PF13166.1 712 0.002 10.7 18.3 2 2 0.00031 0.024 7.1 7.2 322 439 158 285 138 291 0.75 # 827 # 1702 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.501 1_2 - 347 AAA_13 PF13166.1 712 0.015 7.7 36.6 1 2 0.0057 0.44 2.9 28.3 283 457 85 259 71 272 0.58 # 223 # 1263 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_2 - 347 AAA_13 PF13166.1 712 0.015 7.7 36.6 2 2 7e-05 0.0054 9.2 23.2 287 474 160 339 154 345 0.78 # 223 # 1263 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_69 - 262 CbiA PF01656.18 195 2.7e-30 99.3 0.0 1 1 4.5e-32 3.4e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 45307 # 46092 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 3_14 - 402 CbiA PF01656.18 195 3.5e-18 59.8 0.0 1 1 8.4e-20 6.4e-18 58.9 0.0 1 142 111 292 111 327 0.76 # 10419 # 11624 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_108 - 816 CbiA PF01656.18 195 0.00089 12.8 0.0 1 1 2.5e-05 0.0019 11.7 0.0 3 49 455 517 454 593 0.60 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_4 - 504 AAA_14 PF13173.1 128 3.7e-05 17.7 1.3 1 2 2.5e-05 0.0058 10.6 0.1 11 46 28 62 18 156 0.76 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_4 - 504 AAA_14 PF13173.1 128 3.7e-05 17.7 1.3 2 2 0.0011 0.26 5.3 0.0 51 99 176 227 127 241 0.73 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_6 - 565 HI0933_like PF03486.9 409 5e-08 25.8 3.7 1 2 1.2e-06 0.00027 13.5 2.5 2 33 99 130 98 138 0.91 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 HI0933_like PF03486.9 409 5e-08 25.8 3.7 2 2 7.2e-06 0.0016 10.9 0.0 82 164 284 366 276 385 0.83 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 4_8 - 382 AAA_29 PF13555.1 62 0.00099 12.7 0.0 1 1 1.6e-05 0.0019 11.9 0.0 17 47 35 64 21 72 0.70 # 6070 # 7215 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.592 1_120 - 323 AAA_29 PF13555.1 62 0.0027 11.3 1.0 1 1 5.4e-05 0.0061 10.2 0.3 21 38 59 76 54 79 0.86 # 90138 # 91106 # 1 # ID=1_120;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_6 - 565 FAD_binding_2 PF00890.19 417 9.8e-06 18.6 4.7 1 3 4.3e-08 9.8e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 FAD_binding_2 PF00890.19 417 9.8e-06 18.6 4.7 2 3 0.034 7.9 -0.8 0.1 143 204 311 369 297 388 0.72 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 FAD_binding_2 PF00890.19 417 9.8e-06 18.6 4.7 3 3 0.074 17 -1.9 0.0 376 402 388 408 377 424 0.82 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_50 - 488 AAA PF00004.24 132 4.8e-29 95.3 0.0 1 1 1.8e-30 2.1e-28 93.3 0.0 1 131 245 371 245 372 0.97 # 34808 # 36271 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_120 - 323 AAA PF00004.24 132 0.00078 13.7 0.1 1 1 1.5e-05 0.0017 12.6 0.1 2 33 65 96 64 149 0.83 # 90138 # 91106 # 1 # ID=1_120;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_4 - 504 UvrD_C PF13361.1 351 2.1e-10 34.6 0.0 1 1 1.7e-12 3.9e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_21 - 318 PAPS_reduct PF01507.14 174 5e-12 40.0 0.4 1 2 0.023 2.6 1.9 0.0 2 17 53 68 52 92 0.77 # 18201 # 19154 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_21 - 318 PAPS_reduct PF01507.14 174 5e-12 40.0 0.4 2 2 6.3e-13 7.2e-11 36.3 0.1 58 172 154 279 145 281 0.85 # 18201 # 19154 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_143 - 818 PAPS_reduct PF01507.14 174 5.8e-05 17.0 0.0 1 1 2.1e-06 0.00024 15.0 0.0 3 151 69 256 67 261 0.69 # 107461 # 109914 # 1 # ID=1_143;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.523 2_6 - 565 Pyr_redox_3 PF13738.1 203 3e-17 57.4 0.2 1 2 4.5e-14 1e-11 39.3 0.1 1 201 101 303 101 305 0.75 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 Pyr_redox_3 PF13738.1 203 3e-17 57.4 0.2 2 2 9e-07 0.00021 15.5 0.0 93 147 320 375 309 430 0.76 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 4_4 - 301 NAD_binding_11 PF14833.1 122 1.1e-37 122.9 0.3 1 2 0.029 6.6 0.9 1.1 8 53 96 141 92 153 0.85 # 2677 # 3579 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.641 4_4 - 301 NAD_binding_11 PF14833.1 122 1.1e-37 122.9 0.3 2 2 4.7e-40 1.1e-37 122.9 0.3 1 121 170 289 170 290 0.98 # 2677 # 3579 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.641 1_72 - 222 N6_Mtase PF02384.11 311 9.4e-07 22.2 0.0 1 1 6.7e-09 1.5e-06 21.5 0.0 3 97 81 176 79 211 0.72 # 47651 # 48316 # -1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.518 1_92 - 622 TraG-D_C PF12696.2 128 6.5e-15 49.2 0.0 1 1 1e-16 1.2e-14 48.4 0.0 1 124 471 595 471 599 0.83 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_108 - 816 TraG-D_C PF12696.2 128 2e-06 21.8 0.0 1 1 4e-08 4.6e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 4_4 - 301 NAD_binding_2 PF03446.10 163 1.2e-40 133.0 3.6 1 1 8e-43 1.8e-40 132.5 3.6 2 162 5 166 4 167 0.96 # 2677 # 3579 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.641 1_69 - 262 AAA_31 PF13614.1 157 3e-10 34.3 0.0 1 1 5.3e-12 6e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 45307 # 46092 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 3_14 - 402 AAA_31 PF13614.1 157 0.00022 15.3 0.0 1 1 1.1e-05 0.0013 12.8 0.0 108 147 235 273 230 279 0.86 # 10419 # 11624 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_50 - 488 AAA_33 PF13671.1 143 0.00063 13.7 0.0 1 1 1.6e-05 0.0019 12.2 0.0 2 33 245 297 245 399 0.73 # 34808 # 36271 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_122 - 176 AAA_33 PF13671.1 143 0.0013 12.7 0.0 1 1 1.7e-05 0.002 12.1 0.0 26 102 33 104 23 109 0.75 # 92089 # 92616 # 1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.544 1_66 - 415 Methyltransf_26 PF13659.1 117 0.00014 16.0 0.0 1 2 6.1e-06 0.0014 12.8 0.0 68 116 126 180 47 181 0.83 # 43133 # 44377 # 1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_66 - 415 Methyltransf_26 PF13659.1 117 0.00014 16.0 0.0 2 2 0.04 9.1 0.4 0.0 1 31 352 381 352 395 0.71 # 43133 # 44377 # 1 # ID=1_66;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.528 4_4 - 301 2-Hacid_dh_C PF02826.14 178 3.2e-06 20.5 0.1 1 1 2.5e-08 5.7e-06 19.6 0.1 36 146 4 118 2 124 0.85 # 2677 # 3579 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.641 1_4 - 504 AAA_30 PF13604.1 196 1.1e-07 25.7 0.1 1 2 9.2e-07 0.00021 15.0 0.0 19 80 20 81 11 109 0.77 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_4 - 504 AAA_30 PF13604.1 196 1.1e-07 25.7 0.1 2 2 0.00017 0.04 7.5 0.0 115 133 211 229 174 278 0.75 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_92 - 622 FtsK_SpoIIIE PF01580.13 205 2e-07 24.8 0.0 1 2 3.8e-08 2.9e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 FtsK_SpoIIIE PF01580.13 205 2e-07 24.8 0.0 2 2 0.042 3.2 1.2 0.0 176 204 481 509 472 510 0.86 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_108 - 816 FtsK_SpoIIIE PF01580.13 205 1.9e-06 21.6 0.1 1 1 6.6e-08 5.1e-06 20.2 0.1 33 84 446 495 401 698 0.67 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_84 - 206 FtsK_SpoIIIE PF01580.13 205 0.0017 11.9 0.2 1 1 7.1e-05 0.0054 10.3 0.0 34 53 4 23 1 28 0.83 # 54071 # 54688 # 1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 4_8 - 382 DUF2813 PF11398.3 373 0.00012 15.3 0.2 1 1 9.6e-07 0.00022 14.4 0.0 3 48 21 66 19 77 0.89 # 6070 # 7215 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.592 4_8 - 382 ABC_tran PF00005.22 137 6.5e-07 23.8 0.0 1 1 1.2e-07 1.3e-05 19.6 0.0 8 43 37 108 32 323 0.57 # 6070 # 7215 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.592 1_120 - 323 ABC_tran PF00005.22 137 0.0016 12.8 0.0 1 1 2.7e-05 0.0031 11.9 0.0 11 46 61 96 55 117 0.85 # 90138 # 91106 # 1 # ID=1_120;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_6 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.5 0.0 1 3 0.0033 0.74 2.7 0.0 187 220 94 125 45 130 0.77 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.5 0.0 2 3 3.3e-06 0.00077 12.5 0.0 132 231 218 308 202 332 0.82 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.5 0.0 3 3 0.057 13 -1.4 0.0 132 160 346 369 314 377 0.67 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 4_4 - 301 UDPG_MGDP_dh_N PF03721.9 185 1.6e-05 18.4 0.1 1 2 2e-06 0.00046 13.7 0.1 2 39 6 43 5 49 0.93 # 2677 # 3579 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.641 4_4 - 301 UDPG_MGDP_dh_N PF03721.9 185 1.6e-05 18.4 0.1 2 2 0.0061 1.4 2.3 0.0 107 139 86 117 82 126 0.77 # 2677 # 3579 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.641 1_4 - 504 AAA_19 PF13245.1 76 3.6e-09 30.4 0.0 1 1 8.4e-11 9.6e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_120 - 323 AAA_19 PF13245.1 76 0.00035 14.4 0.1 1 1 7e-06 0.0008 13.3 0.1 10 35 61 86 51 112 0.76 # 90138 # 91106 # 1 # ID=1_120;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_108 - 816 AAA_10 PF12846.2 304 6.1e-59 193.9 0.1 1 1 9e-61 1e-58 193.2 0.1 1 296 451 729 451 738 0.93 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_92 - 622 AAA_10 PF12846.2 304 2.2e-18 60.8 0.2 1 1 5.3e-20 6.1e-18 59.3 0.2 2 299 173 549 172 553 0.71 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 2_6 - 565 FAD_oxidored PF12831.2 428 6.7e-06 19.4 3.6 1 1 2.9e-08 6.7e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 DAO PF01266.19 358 7.9e-09 28.9 11.7 1 3 1.4e-08 3.1e-06 20.3 0.7 1 38 99 134 99 190 0.84 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 DAO PF01266.19 358 7.9e-09 28.9 11.7 2 3 0.032 7.2 -0.6 0.1 3 31 273 301 271 307 0.75 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 DAO PF01266.19 358 7.9e-09 28.9 11.7 3 3 9.4e-07 0.00022 14.3 0.5 152 208 314 372 307 433 0.74 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_4 - 504 ResIII PF04851.10 184 2.4e-06 21.5 0.0 1 1 5.5e-08 6.3e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_92 - 622 ResIII PF04851.10 184 0.00024 15.0 0.0 1 1 4.2e-06 0.00049 14.0 0.0 23 57 170 206 129 214 0.74 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_2 - 347 DUF3584 PF12128.3 1201 0.038 5.3 51.1 1 2 0.0051 1.2 0.4 32.3 377 534 86 242 42 246 0.65 # 223 # 1263 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_2 - 347 DUF3584 PF12128.3 1201 0.038 5.3 51.1 2 2 2e-05 0.0046 8.3 20.6 613 709 225 327 220 345 0.80 # 223 # 1263 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_4 - 504 Viral_helicase1 PF01443.13 234 2.1e-10 34.6 0.0 1 3 1.4e-05 0.0033 11.0 0.0 2 49 23 73 22 87 0.67 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_4 - 504 Viral_helicase1 PF01443.13 234 2.1e-10 34.6 0.0 2 3 1.8e-05 0.0042 10.7 0.0 56 105 188 234 146 256 0.78 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_4 - 504 Viral_helicase1 PF01443.13 234 2.1e-10 34.6 0.0 3 3 5.2e-05 0.012 9.2 0.0 176 227 404 462 344 467 0.75 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_6 - 565 NAD_binding_9 PF13454.1 156 6.5e-05 16.8 2.8 1 3 0.0081 1.9 2.3 0.1 1 41 101 135 101 162 0.81 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 NAD_binding_9 PF13454.1 156 6.5e-05 16.8 2.8 2 3 0.034 7.7 0.3 0.0 134 155 218 241 202 242 0.72 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 NAD_binding_9 PF13454.1 156 6.5e-05 16.8 2.8 3 3 6.6e-06 0.0015 12.4 0.1 112 155 321 366 311 367 0.85 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_92 - 622 DEAD PF00270.24 169 5.3e-05 16.8 0.0 1 1 4.4e-07 0.0001 15.9 0.0 13 52 171 208 159 231 0.85 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_50 - 488 DUF815 PF05673.8 250 3.6e-06 20.1 0.0 1 1 5e-08 1.1e-05 18.5 0.0 19 154 208 353 194 365 0.75 # 34808 # 36271 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_6 - 565 Pyr_redox PF00070.22 80 8.2e-20 65.2 6.0 1 2 1.4e-06 0.00033 15.2 1.5 1 31 99 129 99 131 0.96 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 Pyr_redox PF00070.22 80 8.2e-20 65.2 6.0 2 2 6.2e-18 1.4e-15 51.6 0.2 1 74 271 345 271 354 0.90 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 1_92 - 622 DUF853 PF05872.7 504 2e-06 20.5 0.0 1 1 1.4e-08 3.1e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 TrwB_AAD_bind PF10412.4 386 4.5e-19 62.3 0.0 1 2 8.9e-13 1e-10 34.8 0.0 10 54 167 211 161 313 0.70 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 TrwB_AAD_bind PF10412.4 386 4.5e-19 62.3 0.0 2 2 6.9e-10 7.9e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_108 - 816 TrwB_AAD_bind PF10412.4 386 5.1e-08 25.9 0.0 1 2 1.5e-05 0.0017 11.1 0.0 6 72 442 517 438 520 0.85 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_108 - 816 TrwB_AAD_bind PF10412.4 386 5.1e-08 25.9 0.0 2 2 5.6e-06 0.00064 12.4 0.1 232 301 643 712 613 731 0.66 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_4 - 504 AAA_11 PF13086.1 236 6.6e-07 23.2 0.1 1 1 1.9e-08 4.3e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_108 - 816 Guanylate_kin PF00625.16 183 0.00037 14.0 0.1 1 3 0.0039 0.88 3.0 0.0 3 26 452 475 450 503 0.86 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_108 - 816 Guanylate_kin PF00625.16 183 0.00037 14.0 0.1 2 3 0.012 2.7 1.4 0.0 76 115 597 637 591 703 0.82 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_108 - 816 Guanylate_kin PF00625.16 183 0.00037 14.0 0.1 3 3 0.001 0.24 4.9 0.0 75 131 714 770 697 777 0.87 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_92 - 622 T4SS-DNA_transf PF02534.9 469 5.9e-05 15.8 0.0 1 2 5.6e-07 0.00013 14.7 0.0 37 114 168 248 125 346 0.72 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 T4SS-DNA_transf PF02534.9 469 5.9e-05 15.8 0.0 2 2 0.097 22 -2.6 0.0 328 389 494 555 474 572 0.74 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 ArgK PF03308.11 267 0.00025 13.9 0.0 1 1 1.8e-06 0.00042 13.2 0.0 12 68 158 209 153 214 0.88 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_21 - 318 tRNA_Me_trans PF03054.11 356 5.9e-05 15.8 0.0 1 2 8.8e-07 0.0002 14.0 0.0 2 71 52 122 51 144 0.74 # 18201 # 19154 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_21 - 318 tRNA_Me_trans PF03054.11 356 5.9e-05 15.8 0.0 2 2 0.031 7.1 -0.9 0.0 192 224 273 305 235 312 0.82 # 18201 # 19154 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 4_4 - 301 TrkA_N PF02254.13 116 6.1e-05 17.1 0.0 1 1 6.4e-07 0.00015 15.9 0.0 1 43 7 49 7 79 0.85 # 2677 # 3579 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.641 2_6 - 565 AlaDh_PNT_C PF01262.16 168 5.5e-05 16.8 3.1 1 2 0.001 0.12 6.0 0.8 15 50 92 127 89 130 0.90 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 2_6 - 565 AlaDh_PNT_C PF01262.16 168 5.5e-05 16.8 3.1 2 2 4.2e-05 0.0048 10.5 0.1 16 58 265 307 257 339 0.84 # 2828 # 4522 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654 4_4 - 301 AlaDh_PNT_C PF01262.16 168 0.00039 14.1 1.6 1 2 1.1e-05 0.0013 12.4 0.1 21 65 5 49 2 62 0.89 # 2677 # 3579 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.641 4_4 - 301 AlaDh_PNT_C PF01262.16 168 0.00039 14.1 1.6 2 2 0.056 6.4 0.4 0.2 13 42 84 113 72 117 0.84 # 2677 # 3579 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.641 1_4 - 504 UvrD-helicase PF00580.16 315 1.3e-16 54.9 3.9 1 2 2.9e-06 0.00066 13.1 0.1 2 38 8 44 7 64 0.81 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_4 - 504 UvrD-helicase PF00580.16 315 1.3e-16 54.9 3.9 2 2 3.4e-15 7.7e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 1550 # 3061 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_50 - 488 AAA_25 PF13481.1 194 0.00015 15.3 3.6 1 3 0.061 2.8 1.3 1.4 36 55 245 264 224 275 0.81 # 34808 # 36271 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_50 - 488 AAA_25 PF13481.1 194 0.00015 15.3 3.6 2 3 0.00018 0.008 9.6 0.0 127 176 287 336 270 348 0.69 # 34808 # 36271 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_50 - 488 AAA_25 PF13481.1 194 0.00015 15.3 3.6 3 3 0.021 0.95 2.9 0.0 69 172 337 440 325 448 0.66 # 34808 # 36271 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_108 - 816 AAA_25 PF13481.1 194 0.00079 12.9 0.0 1 1 4.2e-05 0.0019 11.6 0.0 36 86 454 494 447 532 0.82 # 78032 # 80479 # 1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_69 - 262 AAA_25 PF13481.1 194 0.00089 12.7 0.0 1 1 3e-05 0.0014 12.1 0.0 42 91 12 51 11 134 0.78 # 45307 # 46092 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_92 - 622 AAA_25 PF13481.1 194 0.0009 12.7 0.0 1 1 6.1e-05 0.0028 11.1 0.0 20 137 159 265 145 272 0.78 # 61961 # 63826 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 4_8 - 382 AAA_25 PF13481.1 194 0.0016 12.0 0.0 1 1 6.7e-05 0.0031 11.0 0.0 31 95 38 105 26 140 0.76 # 6070 # 7215 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.592 1_120 - 323 AAA_5 PF07728.9 139 2.2e-18 60.4 0.0 1 1 1.6e-20 3.6e-18 59.7 0.0 2 125 64 188 63 197 0.94 # 90138 # 91106 # 1 # ID=1_120;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/9defa312-5a62-4b9d-8a92-a768c970f283 # Target file: checkm_output/bins/pm1772/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1772/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9defa312-5a62-4b9d-8a92-a768c970f283 checkm_output/bins/pm1772/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:00:22 2020 # [ok]