# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 519 Seryl_tRNA_N PF02403.17 108 3.7e-05 12.5 8.8 1 3 0.0037 0.019 3.8 0.1 39 104 220 286 199 290 0.90 # 165 # 1721 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.477 1_1 - 519 Seryl_tRNA_N PF02403.17 108 3.7e-05 12.5 8.8 2 3 0.0012 0.0059 5.4 0.1 27 59 317 349 305 370 0.85 # 165 # 1721 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.477 1_1 - 519 Seryl_tRNA_N PF02403.17 108 3.7e-05 12.5 8.8 3 3 0.00084 0.0042 5.9 1.7 17 107 389 478 383 479 0.75 # 165 # 1721 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.477 1_1 - 519 AAA_13 PF13166.1 712 0.00012 9.2 17.4 1 2 2.2e-05 0.00011 9.3 2.9 365 468 244 349 195 369 0.54 # 165 # 1721 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.477 1_1 - 519 AAA_13 PF13166.1 712 0.00012 9.2 17.4 2 2 0.00059 0.0029 4.6 8.3 322 439 385 512 342 518 0.75 # 165 # 1721 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.477 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/b0f4009a-afc1-417c-9f12-87c12b700a86 # Target file: checkm_output/bins/pm1751/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1751/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/b0f4009a-afc1-417c-9f12-87c12b700a86 checkm_output/bins/pm1751/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:00:08 2020 # [ok]