# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_2 - 181 cobW PF02492.14 178 0.0006 11.7 0.0 1 1 1.3e-05 0.00093 11.1 0.0 2 22 2 22 1 30 0.79 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_18 - 1079 Torsin PF06309.6 127 1.5e-05 17.3 0.0 1 1 6.4e-07 4.5e-05 15.8 0.0 19 85 460 526 452 537 0.83 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_2 - 224 3HCDH_N PF02737.13 180 0.00072 11.7 1.7 1 2 0.00029 0.021 6.9 0.1 68 118 33 83 18 86 0.84 # 101 # 772 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.512 3_2 - 224 3HCDH_N PF02737.13 180 0.00072 11.7 1.7 2 2 0.0021 0.15 4.1 0.2 40 80 142 180 111 206 0.67 # 101 # 772 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.512 1_18 - 1079 UvrD_C_2 PF13538.1 104 1.8e-16 52.6 0.1 1 1 1e-17 7.4e-16 50.7 0.1 2 102 797 896 796 898 0.76 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_17 - 510 DUF87 PF01935.12 229 7.8e-08 24.8 0.0 1 1 1.7e-09 1.2e-07 24.2 0.0 10 68 116 170 109 262 0.85 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 4_2 - 181 AAA_22 PF13401.1 131 1.2e-05 17.9 0.0 1 1 9.9e-07 2.3e-05 17.0 0.0 6 37 2 34 1 177 0.84 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 3_3 - 867 AAA_22 PF13401.1 131 7.4e-05 15.3 0.0 1 1 7.5e-05 0.0018 10.9 0.0 5 28 492 515 489 549 0.85 # 790 # 3390 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_18 - 1079 AAA_22 PF13401.1 131 0.00046 12.8 0.2 1 1 0.00022 0.0053 9.4 0.2 4 125 494 598 490 603 0.81 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_15 - 478 DNA_methylase PF00145.12 335 1.6e-79 259.8 0.0 1 1 4.4e-81 3.2e-79 258.8 0.0 1 331 96 457 96 460 0.86 # 7806 # 9239 # 1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.482 4_2 - 181 AAA_17 PF13207.1 121 4.3e-07 23.2 0.1 1 1 3.5e-08 8.2e-07 22.3 0.1 1 77 2 94 2 173 0.54 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_17 - 510 AAA_17 PF13207.1 121 0.00039 13.7 0.1 1 1 6.7e-05 0.0016 11.7 0.0 4 42 131 191 129 260 0.58 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 3_3 - 867 AAA_17 PF13207.1 121 0.0004 13.7 3.9 1 1 0.00023 0.0053 10.0 0.0 3 21 495 513 494 565 0.80 # 790 # 3390 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_18 - 1079 PhoH PF02562.11 205 2.2e-09 29.3 4.5 1 2 5.4e-07 3.9e-05 15.4 0.3 6 39 479 514 475 536 0.78 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_18 - 1079 PhoH PF02562.11 205 2.2e-09 29.3 4.5 2 2 1.5e-06 0.00011 13.9 0.1 120 162 562 605 553 635 0.82 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_17 - 510 T2SE PF00437.15 272 0.00062 11.1 0.1 1 1 1.5e-05 0.0011 10.3 0.1 130 149 128 147 103 160 0.84 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 4_2 - 181 Cytidylate_kin2 PF13189.1 179 0.00033 13.0 0.0 1 2 6.6e-05 0.0047 9.3 0.0 1 23 2 24 2 46 0.78 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_2 - 181 Cytidylate_kin2 PF13189.1 179 0.00033 13.0 0.0 2 2 0.015 1.1 1.6 0.0 112 135 99 122 91 136 0.77 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_2 - 181 Zeta_toxin PF06414.7 201 3.2e-05 15.5 0.0 1 2 4.7e-06 0.00033 12.2 0.0 19 53 3 35 1 120 0.83 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_2 - 181 Zeta_toxin PF06414.7 201 3.2e-05 15.5 0.0 2 2 0.024 1.7 0.1 0.0 45 74 106 133 95 150 0.73 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 3_3 - 867 AAA_16 PF13191.1 185 0.00071 12.0 0.0 1 2 9e-05 0.0064 8.9 0.0 25 47 492 514 481 574 0.85 # 790 # 3390 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 3_3 - 867 AAA_16 PF13191.1 185 0.00071 12.0 0.0 2 2 0.077 5.5 -0.7 0.0 122 164 674 715 615 723 0.65 # 790 # 3390 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 3_3 - 867 AAA_23 PF13476.1 202 0.0034 10.1 0.0 1 1 9.5e-05 0.0034 10.1 0.0 22 39 494 511 464 521 0.84 # 790 # 3390 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 3_2 - 224 AAA_23 PF13476.1 202 0.018 7.8 12.2 1 1 8.7e-05 0.0031 10.2 0.7 97 196 67 185 58 215 0.60 # 101 # 772 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.512 4_2 - 181 AAA_18 PF13238.1 129 4.8e-11 35.5 0.0 1 1 2.4e-12 8.5e-11 34.7 0.0 1 126 3 134 3 137 0.71 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_17 - 510 AAA_18 PF13238.1 129 9.1e-05 15.2 0.0 1 1 5.2e-06 0.00019 14.2 0.0 3 21 131 149 130 238 0.78 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_14 - 239 CbiA PF01656.18 195 3e-06 19.2 0.6 1 2 0.0004 0.029 6.2 0.1 1 19 3 21 3 25 0.89 # 7561 # 8277 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.418 1_14 - 239 CbiA PF01656.18 195 3e-06 19.2 0.6 2 2 9.1e-06 0.00065 11.5 0.0 109 165 81 142 29 173 0.76 # 7561 # 8277 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.418 1_17 - 510 AAA_14 PF13173.1 128 8.8e-06 18.1 0.0 1 2 4.3e-06 0.00015 14.1 0.0 6 89 130 213 125 234 0.76 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_17 - 510 AAA_14 PF13173.1 128 8.8e-06 18.1 0.0 2 2 0.043 1.5 1.1 0.0 53 81 340 372 300 391 0.57 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 4_2 - 181 AAA_14 PF13173.1 128 0.00042 12.7 0.0 1 1 2.3e-05 0.00081 11.7 0.0 4 27 2 25 1 54 0.79 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_18 - 1079 AAA PF00004.24 132 2.4e-06 20.2 0.9 1 1 1.3e-07 9.1e-06 18.3 0.1 4 111 500 600 497 612 0.73 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_18 - 1079 Sigma54_activat PF00158.21 168 0.00012 14.0 0.4 1 1 4.7e-06 0.00033 12.6 0.4 7 130 479 600 473 606 0.80 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_17 - 510 TraG-D_C PF12696.2 128 9.6e-22 69.7 0.0 1 1 2.2e-23 1.6e-21 69.0 0.0 1 127 350 471 350 472 0.80 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 4_2 - 181 AAA_33 PF13671.1 143 4.1e-11 35.4 0.0 1 1 7.3e-13 5.2e-11 35.0 0.0 2 127 3 130 2 151 0.75 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_18 - 1079 AAA_30 PF13604.1 196 1.6e-53 173.6 7.3 1 1 8.4e-55 6e-53 171.7 6.1 1 192 477 660 477 663 0.97 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_3 - 867 FtsK_SpoIIIE PF01580.13 205 8.4e-06 17.8 0.0 1 1 5.4e-07 1.9e-05 16.6 0.0 21 62 462 515 445 522 0.82 # 790 # 3390 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_17 - 510 FtsK_SpoIIIE PF01580.13 205 0.00046 12.1 0.0 1 1 2.3e-05 0.00081 11.3 0.0 39 59 124 147 95 153 0.78 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 3_3 - 867 ABC_tran PF00005.22 137 0.00048 12.9 0.0 1 1 2.3e-05 0.0016 11.2 0.0 14 38 494 518 481 550 0.83 # 790 # 3390 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 4_2 - 181 TIGR03263 TIGR03263 180 0.00051 11.8 0.0 1 1 1.6e-05 0.0011 10.7 0.0 3 26 2 25 1 31 0.81 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_2 - 181 AAA_19 PF13245.1 76 0.00017 13.8 0.0 1 1 1.6e-05 0.00058 12.1 0.0 15 33 5 22 2 38 0.84 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_18 - 1079 AAA_19 PF13245.1 76 0.0017 10.6 3.7 1 2 0.00056 0.02 7.2 0.2 2 75 485 551 484 552 0.75 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_18 - 1079 AAA_19 PF13245.1 76 0.0017 10.6 3.7 2 2 0.027 0.97 1.7 0.0 17 32 706 721 705 731 0.82 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_18 - 1079 Helicase_RecD PF05127.9 177 1.4e-05 17.2 4.8 1 2 0.00059 0.042 5.9 0.1 122 146 498 522 481 539 0.76 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_18 - 1079 Helicase_RecD PF05127.9 177 1.4e-05 17.2 4.8 2 2 8.1e-06 0.00057 12.0 0.1 75 114 548 585 529 653 0.69 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_3 - 867 AAA_10 PF12846.2 304 1.7e-35 115.3 0.1 1 1 1.6e-36 5.7e-35 113.6 0.0 2 292 492 772 491 780 0.84 # 790 # 3390 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_17 - 510 AAA_10 PF12846.2 304 3.8e-07 22.2 0.1 1 2 1.4e-05 0.00049 12.0 0.1 3 41 128 166 126 177 0.92 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_17 - 510 AAA_10 PF12846.2 304 3.8e-07 22.2 0.1 2 2 0.00023 0.008 8.0 0.0 214 286 339 414 307 431 0.75 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_18 - 1079 Viral_helicase1 PF01443.13 234 4.8e-15 48.1 5.4 1 2 2.3e-08 1.6e-06 20.2 0.0 3 104 499 605 497 654 0.74 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_18 - 1079 Viral_helicase1 PF01443.13 234 4.8e-15 48.1 5.4 2 2 3e-11 2.1e-09 29.6 0.5 157 234 818 899 774 899 0.74 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_17 - 510 TrwB_AAD_bind PF10412.4 386 7.5e-119 389.1 0.0 1 1 2.5e-120 8.8e-119 388.9 0.0 1 385 112 490 112 491 0.95 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 3_3 - 867 TrwB_AAD_bind PF10412.4 386 6.5e-07 20.6 1.6 1 2 9.8e-07 3.5e-05 14.9 0.0 16 51 492 527 484 536 0.92 # 790 # 3390 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 3_3 - 867 TrwB_AAD_bind PF10412.4 386 6.5e-07 20.6 1.6 2 2 0.0028 0.1 3.5 0.0 102 168 741 806 720 812 0.79 # 790 # 3390 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_17 - 510 T4SS-DNA_transf PF02534.9 469 3.8e-12 37.8 0.0 1 1 7.9e-14 5.6e-12 37.3 0.0 263 426 313 472 297 500 0.74 # 9665 # 11194 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_18 - 1079 PIF1 PF05970.9 364 1.7e-06 19.6 0.1 1 2 1.6e-07 1.1e-05 16.9 0.0 2 65 478 537 477 588 0.85 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_18 - 1079 PIF1 PF05970.9 364 1.7e-06 19.6 0.1 2 2 0.087 6.2 -2.0 0.0 334 363 795 823 782 824 0.84 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 4_2 - 181 RNA_helicase PF00910.17 107 0.00041 13.0 0.0 1 1 9.1e-06 0.00065 12.3 0.0 1 26 3 28 3 47 0.84 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_2 - 181 UPF0079 PF02367.12 123 0.00014 13.9 0.0 1 1 3.3e-06 0.00023 13.2 0.0 17 36 2 21 1 30 0.88 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_2 - 181 AAA_24 PF13479.1 213 5.1e-05 15.3 0.0 1 1 1.4e-06 9.9e-05 14.4 0.0 6 33 3 34 1 73 0.90 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_2 - 181 NACHT PF05729.7 166 1.1e-05 17.6 0.0 1 2 7.7e-07 5.4e-05 15.3 0.0 2 22 2 22 1 37 0.89 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_2 - 181 NACHT PF05729.7 166 1.1e-05 17.6 0.0 2 2 0.045 3.2 -0.2 0.0 77 91 151 177 95 179 0.61 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_2 - 181 AAA_28 PF13521.1 163 9.7e-05 14.8 0.0 1 1 2.9e-06 0.00021 13.7 0.0 2 30 3 34 2 165 0.89 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_18 - 1079 Herpes_Helicase PF02689.9 819 1.4e-05 15.4 0.0 1 2 0.0014 0.098 2.7 0.0 173 208 539 574 515 584 0.81 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_18 - 1079 Herpes_Helicase PF02689.9 819 1.4e-05 15.4 0.0 2 2 9.3e-06 0.00066 9.9 0.0 739 782 850 894 831 914 0.80 # 11194 # 14430 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 4_2 - 181 APS_kinase PF01583.15 157 9.9e-06 17.7 0.0 1 2 7.3e-06 0.00052 12.1 0.0 4 24 2 22 1 35 0.87 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_2 - 181 APS_kinase PF01583.15 157 9.9e-06 17.7 0.0 2 2 0.0032 0.23 3.5 0.1 34 73 107 148 95 160 0.86 # 720 # 1262 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/5e66e6ea-5f0e-498f-be27-aacb94dea254 # Target file: checkm_output/bins/pm1743/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1743/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5e66e6ea-5f0e-498f-be27-aacb94dea254 checkm_output/bins/pm1743/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 17:00:03 2020 # [ok]