#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_3                  -            688 DUF87                PF01935.12   229   4.1e-29   91.6   0.0   1   1   2.8e-28   2.8e-27   85.6   0.0     2   229   154   506   153   506 0.83 # 721 # 2784 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.388
1_3                  -            688 AAA_22               PF13401.1    131   3.3e-06   16.9   0.1   1   2     6e-06     6e-05   12.9   0.0     5    41   176   215   174   237 0.77 # 721 # 2784 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.388
1_3                  -            688 AAA_22               PF13401.1    131   3.3e-06   16.9   0.1   2   2     0.026      0.26    1.1   0.0    51   100   459   534   420   563 0.68 # 721 # 2784 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.388
1_8                  -            140 NAD_synthase         PF02540.12   242   4.6e-05   12.0   0.0   1   2   2.1e-05   0.00021    9.8   0.0    39   103     4    70     1    75 0.88 # 8535 # 8954 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536
1_8                  -            140 NAD_synthase         PF02540.12   242   4.6e-05   12.0   0.0   2   2     0.026      0.26   -0.3   0.0   154   171   117   134   110   137 0.80 # 8535 # 8954 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536
1_3                  -            688 FtsK_SpoIIIE         PF01580.13   205   8.4e-08   21.5   0.0   1   2   6.8e-08   6.8e-07   18.6   0.0    22    80   157   221   138   234 0.64 # 721 # 2784 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.388
1_3                  -            688 FtsK_SpoIIIE         PF01580.13   205   8.4e-08   21.5   0.0   2   2      0.04       0.4   -0.3   0.0   180   204   552   576   512   577 0.82 # 721 # 2784 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.388
1_3                  -            688 AAA_10               PF12846.2    304   1.3e-21   66.9   0.0   1   1   7.5e-22   7.5e-21   64.4   0.0     2   297   176   605   175   610 0.67 # 721 # 2784 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.388
1_3                  -            688 TrwB_AAD_bind        PF10412.4    386   7.8e-10   27.4   0.0   1   2   1.8e-08   1.8e-07   19.6   0.0    10    58   170   226   162   232 0.88 # 721 # 2784 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.388
1_3                  -            688 TrwB_AAD_bind        PF10412.4    386   7.8e-10   27.4   0.0   2   2   0.00041    0.0041    5.3   0.0   261   321   554   606   551   617 0.84 # 721 # 2784 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.388
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/296094b7-e98c-43a1-a985-6fb9643e0736
# Target file:     checkm_output/bins/pm173/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pm173/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/296094b7-e98c-43a1-a985-6fb9643e0736 checkm_output/bins/pm173/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:59:53 2020
# [ok]