# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 372 ATP_bind_3 PF01171.15 182 0.00027 14.2 0.0 1 2 5.2e-05 0.0094 9.2 0.0 1 59 52 110 52 129 0.78 # 2539 # 3654 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_4 - 372 ATP_bind_3 PF01171.15 182 0.00027 14.2 0.0 2 2 0.005 0.91 2.7 0.0 134 161 232 260 207 262 0.72 # 2539 # 3654 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_16 - 347 Seryl_tRNA_N PF02403.17 108 0.047 7.5 46.3 1 5 0.019 3.4 1.5 8.8 39 98 89 152 77 158 0.72 # 14222 # 15262 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 Seryl_tRNA_N PF02403.17 108 0.047 7.5 46.3 2 5 0.00084 0.15 5.9 3.1 50 100 146 196 143 199 0.89 # 14222 # 15262 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 Seryl_tRNA_N PF02403.17 108 0.047 7.5 46.3 3 5 2.6e-06 0.00047 13.9 12.2 19 100 216 294 201 297 0.85 # 14222 # 15262 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 Seryl_tRNA_N PF02403.17 108 0.047 7.5 46.3 4 5 0.00031 0.055 7.3 2.1 62 105 284 327 282 330 0.90 # 14222 # 15262 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 Seryl_tRNA_N PF02403.17 108 0.047 7.5 46.3 5 5 0.0059 1.1 3.1 1.6 82 105 304 327 296 345 0.51 # 14222 # 15262 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_39 - 262 MipZ PF09140.6 261 3.2e-10 33.2 0.0 1 2 6.6e-10 1.2e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 24301 # 25086 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_39 - 262 MipZ PF09140.6 261 3.2e-10 33.2 0.0 2 2 0.00031 0.057 6.2 0.0 89 122 117 150 89 166 0.74 # 24301 # 25086 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 3_23 - 565 3HCDH_N PF02737.13 180 0.0057 10.0 6.4 1 2 0.0047 0.85 2.9 2.4 1 30 99 128 99 134 0.93 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 3HCDH_N PF02737.13 180 0.0057 10.0 6.4 2 2 9e-05 0.016 8.6 0.1 2 39 272 309 271 348 0.73 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 GIDA PF01134.17 392 2e-07 23.9 8.3 1 3 1.5e-09 2.7e-07 23.4 4.8 2 151 100 242 99 303 0.72 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 GIDA PF01134.17 392 2e-07 23.9 8.3 2 3 0.039 7.1 -1.0 0.1 3 31 273 301 271 314 0.85 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 GIDA PF01134.17 392 2e-07 23.9 8.3 3 3 0.018 3.3 0.1 0.1 349 385 393 429 387 433 0.77 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_89 - 176 SSB PF00436.20 104 2.2e-41 133.7 0.3 1 1 1.5e-43 2.8e-41 133.4 0.3 1 104 5 109 5 109 0.99 # 71973 # 72500 # 1 # ID=1_89;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_14 - 504 UvrD_C_2 PF13538.1 104 1.4e-10 35.0 0.0 1 1 3.5e-12 6.3e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_23 - 565 Pyr_redox_2 PF07992.9 201 1.3e-43 142.9 0.0 1 1 3e-45 5.5e-43 140.9 0.0 2 199 100 410 99 412 0.96 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_60 - 622 DUF87 PF01935.12 229 1.5e-08 28.4 0.0 1 1 4.3e-10 3.9e-08 27.1 0.0 24 63 173 211 168 269 0.87 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_76 - 816 DUF87 PF01935.12 229 6.7e-08 26.3 0.2 1 1 1.5e-09 1.4e-07 25.3 0.2 24 154 452 587 432 660 0.71 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 3_18 - 331 AAA_22 PF13401.1 131 9.1e-17 55.2 0.0 1 1 3.7e-18 1.7e-16 54.3 0.0 7 126 64 190 59 194 0.94 # 17696 # 18688 # -1 # ID=3_18;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 2_14 - 504 AAA_22 PF13401.1 131 5.9e-05 17.0 0.0 1 2 0.00011 0.0048 10.8 0.0 8 68 23 92 17 122 0.63 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_14 - 504 AAA_22 PF13401.1 131 5.9e-05 17.0 0.0 2 2 0.02 0.9 3.4 0.0 82 124 189 225 164 229 0.77 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_87 - 323 AAA_22 PF13401.1 131 0.00022 15.1 0.0 1 1 1e-05 0.00047 14.1 0.0 5 54 62 103 56 164 0.76 # 70022 # 70990 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_60 - 622 AAA_22 PF13401.1 131 0.00023 15.1 0.0 1 1 1.7e-05 0.00075 13.4 0.0 3 68 171 231 166 287 0.83 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 3_23 - 565 DFP PF04127.10 185 0.0014 12.0 2.4 1 2 0.00039 0.071 6.4 0.4 28 51 105 128 99 156 0.83 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 DFP PF04127.10 185 0.0014 12.0 2.4 2 2 0.0014 0.25 4.7 0.1 32 53 281 302 276 336 0.77 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_106 - 542 DNA_methylase PF00145.12 335 1.1e-28 94.0 0.0 1 1 6.3e-30 5.7e-28 91.7 0.0 3 333 126 441 124 443 0.77 # 83893 # 85518 # 1 # ID=1_106;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_51 - 476 DNA_methylase PF00145.12 335 1.1e-10 34.9 0.0 1 2 4.1e-11 3.7e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 31870 # 33297 # 1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_51 - 476 DNA_methylase PF00145.12 335 1.1e-10 34.9 0.0 2 2 0.0061 0.55 2.9 0.0 290 330 407 448 341 452 0.73 # 31870 # 33297 # 1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_55 - 93 Ribosomal_L2_C PF03947.13 130 0.0009 12.8 0.0 1 1 6.3e-06 0.0011 12.5 0.0 74 111 44 80 24 82 0.86 # 34859 # 35137 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.441 1_87 - 323 AAA_3 PF07726.6 131 0.00012 15.4 0.0 1 1 1.1e-06 0.0002 14.7 0.0 3 114 65 188 63 212 0.80 # 70022 # 70990 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 3_23 - 565 NAD_binding_7 PF13241.1 103 2e-07 25.0 1.1 1 2 5.4e-05 0.0097 9.9 0.2 9 38 99 128 96 184 0.89 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 NAD_binding_7 PF13241.1 103 2e-07 25.0 1.1 2 2 4.7e-06 0.00085 13.3 0.1 5 41 267 306 263 380 0.73 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_97 - 295 N6_N4_Mtase PF01555.13 231 7.2e-09 29.2 0.1 1 2 1.7e-06 0.00031 14.0 0.0 180 223 28 72 4 76 0.84 # 79881 # 80765 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.510 1_97 - 295 N6_N4_Mtase PF01555.13 231 7.2e-09 29.2 0.1 2 2 3.5e-06 0.00063 13.0 0.1 2 172 90 267 89 283 0.72 # 79881 # 80765 # 1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.510 1_87 - 323 AAA_17 PF13207.1 121 4.6e-05 18.0 0.0 1 1 5.5e-07 0.0001 16.9 0.0 3 27 65 89 64 166 0.90 # 70022 # 70990 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_60 - 622 MobB PF03205.9 140 0.00094 12.6 0.0 1 1 1.7e-05 0.0031 10.9 0.0 4 34 176 206 175 214 0.90 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_39 - 262 ArsA_ATPase PF02374.10 305 1e-05 18.4 0.0 1 2 3e-07 5.4e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 24301 # 25086 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_39 - 262 ArsA_ATPase PF02374.10 305 1e-05 18.4 0.0 2 2 0.029 5.2 -0.3 0.0 124 136 124 136 106 143 0.79 # 24301 # 25086 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 2_14 - 504 PhoH PF02562.11 205 4.6e-06 19.7 0.2 1 2 0.0013 0.24 4.3 0.0 22 45 22 45 4 61 0.78 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_14 - 504 PhoH PF02562.11 205 4.6e-06 19.7 0.2 2 2 7.5e-06 0.0013 11.7 0.0 122 168 196 240 193 255 0.83 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_87 - 323 T2SE PF00437.15 272 6.3e-05 15.7 0.0 1 1 1.6e-06 0.00015 14.5 0.0 105 148 40 81 9 100 0.77 # 70022 # 70990 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_60 - 622 T2SE PF00437.15 272 0.00033 13.3 0.0 1 1 5.9e-06 0.00053 12.6 0.0 116 162 163 206 124 227 0.78 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 3_23 - 565 NAD_binding_8 PF13450.1 68 6.3e-05 16.7 1.2 1 2 3.5e-07 6.3e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 NAD_binding_8 PF13450.1 68 6.3e-05 16.7 1.2 2 2 0.041 7.4 0.5 0.2 1 25 274 298 274 303 0.81 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 F420_oxidored PF03807.12 96 0.013 9.7 4.1 1 2 0.0023 0.42 4.9 1.2 2 31 100 126 99 131 0.87 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 F420_oxidored PF03807.12 96 0.013 9.7 4.1 2 2 0.0075 1.4 3.3 0.1 1 34 271 300 271 323 0.87 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_4 - 372 TIGR02432 TIGR02432 189 7.3e-05 16.2 0.1 1 2 1.1e-05 0.0019 11.5 0.0 1 58 52 109 52 119 0.85 # 2539 # 3654 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_4 - 372 TIGR02432 TIGR02432 189 7.3e-05 16.2 0.1 2 2 0.0084 1.5 2.1 0.0 140 165 235 260 207 262 0.76 # 2539 # 3654 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_87 - 323 Arch_ATPase PF01637.13 234 7.6e-05 16.2 0.0 1 1 7e-07 0.00013 15.5 0.0 4 44 45 85 43 94 0.91 # 70022 # 70990 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 3_18 - 331 AAA_16 PF13191.1 185 3.7e-05 17.5 0.0 1 1 1.2e-05 0.00053 13.7 0.0 8 103 45 145 43 186 0.62 # 17696 # 18688 # -1 # ID=3_18;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 1_87 - 323 AAA_16 PF13191.1 185 4.3e-05 17.3 0.8 1 1 2.9e-06 0.00013 15.7 0.0 7 48 47 85 42 102 0.79 # 70022 # 70990 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_76 - 816 AAA_16 PF13191.1 185 5e-05 17.1 0.2 1 1 6.3e-06 0.00029 14.6 0.2 20 63 447 490 439 659 0.64 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_53 - 206 AAA_16 PF13191.1 185 7.6e-05 16.5 0.1 1 1 2.5e-06 0.00011 15.9 0.1 27 68 11 54 3 168 0.79 # 34009 # 34626 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.519 2_16 - 347 AAA_13 PF13166.1 712 0.012 7.7 36.6 1 2 0.0019 0.34 2.9 28.3 283 457 85 259 71 272 0.58 # 14222 # 15262 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 AAA_13 PF13166.1 712 0.012 7.7 36.6 2 2 2.3e-05 0.0042 9.2 23.2 287 474 160 339 154 345 0.78 # 14222 # 15262 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_39 - 262 CbiA PF01656.18 195 2.1e-30 99.3 0.0 1 1 3e-32 2.7e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 24301 # 25086 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_76 - 816 CbiA PF01656.18 195 0.00071 12.7 0.0 1 1 1.7e-05 0.0015 11.7 0.0 3 49 455 517 454 593 0.60 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_14 - 504 AAA_14 PF13173.1 128 2.9e-05 17.7 1.3 1 2 2.5e-05 0.0046 10.6 0.1 11 46 28 62 18 156 0.76 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_14 - 504 AAA_14 PF13173.1 128 2.9e-05 17.7 1.3 2 2 0.0011 0.2 5.3 0.0 51 99 176 227 127 241 0.73 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_23 - 565 HI0933_like PF03486.9 409 4.6e-08 25.6 4.0 1 2 1.2e-06 0.00022 13.5 2.5 2 33 99 130 98 138 0.91 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 HI0933_like PF03486.9 409 4.6e-08 25.6 4.0 2 2 6.5e-06 0.0012 11.1 0.0 82 164 284 366 261 385 0.84 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_87 - 323 AAA_29 PF13555.1 62 0.0022 11.3 1.0 1 1 2.7e-05 0.0048 10.2 0.3 21 38 59 76 54 79 0.86 # 70022 # 70990 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 3_23 - 565 FAD_binding_2 PF00890.19 417 7.7e-06 18.6 4.7 1 3 4.3e-08 7.7e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 FAD_binding_2 PF00890.19 417 7.7e-06 18.6 4.7 2 3 0.033 5.9 -0.7 0.1 143 204 311 369 298 394 0.73 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 FAD_binding_2 PF00890.19 417 7.7e-06 18.6 4.7 3 3 0.077 14 -2.0 0.0 376 402 388 408 377 422 0.82 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_87 - 323 AAA PF00004.24 132 0.00061 13.7 0.1 1 1 7.4e-06 0.0013 12.6 0.1 2 33 65 96 64 149 0.83 # 70022 # 70990 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_14 - 504 UvrD_C PF13361.1 351 1.6e-10 34.6 0.0 1 1 1.7e-12 3.1e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_4 - 372 PAPS_reduct PF01507.14 174 6.3e-12 39.4 0.4 1 2 0.028 2.5 1.6 0.0 2 17 53 68 52 91 0.76 # 2539 # 3654 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_4 - 372 PAPS_reduct PF01507.14 174 6.3e-12 39.4 0.4 2 2 8.8e-13 8e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 2539 # 3654 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_110 - 333 PAPS_reduct PF01507.14 174 7.6e-06 19.6 0.0 1 1 3.1e-07 2.8e-05 17.7 0.0 3 151 69 256 67 260 0.69 # 87345 # 88343 # 1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.521 3_23 - 565 Pyr_redox_3 PF13738.1 203 1.7e-17 57.9 0.2 1 2 3.3e-14 5.9e-12 39.8 0.1 1 201 101 303 101 305 0.74 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 Pyr_redox_3 PF13738.1 203 1.7e-17 57.9 0.2 2 2 9e-07 0.00016 15.5 0.0 93 147 320 375 309 430 0.76 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_18 - 331 TniB PF05621.6 302 3.8e-201 659.8 5.7 1 1 2.6e-203 4.6e-201 659.6 5.7 1 287 1 287 1 300 0.98 # 17696 # 18688 # -1 # ID=3_18;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 1_42 - 212 N6_Mtase PF02384.11 311 6.7e-07 22.3 0.0 1 1 5.9e-09 1.1e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 26645 # 27280 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_60 - 622 TraG-D_C PF12696.2 128 5.1e-15 49.2 0.0 1 1 1e-16 9.2e-15 48.4 0.0 1 124 471 595 471 599 0.83 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_76 - 816 TraG-D_C PF12696.2 128 1.6e-06 21.8 0.0 1 1 4e-08 3.6e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_39 - 262 AAA_31 PF13614.1 157 2.4e-10 34.3 0.0 1 1 2.6e-12 4.7e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 24301 # 25086 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_89 - 176 AAA_33 PF13671.1 143 0.001 12.7 0.0 1 1 8.6e-06 0.0015 12.1 0.0 26 102 33 104 23 109 0.75 # 71973 # 72500 # 1 # ID=1_89;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_14 - 504 AAA_30 PF13604.1 196 8.8e-08 25.7 0.1 1 2 9.2e-07 0.00017 15.0 0.0 19 80 20 81 11 109 0.77 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_14 - 504 AAA_30 PF13604.1 196 8.8e-08 25.7 0.1 2 2 0.00017 0.031 7.5 0.0 115 133 211 229 174 278 0.75 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_60 - 622 FtsK_SpoIIIE PF01580.13 205 1.5e-07 24.8 0.0 1 2 3.8e-08 2.3e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_60 - 622 FtsK_SpoIIIE PF01580.13 205 1.5e-07 24.8 0.0 2 2 0.042 2.5 1.2 0.0 176 204 481 509 472 510 0.86 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_76 - 816 FtsK_SpoIIIE PF01580.13 205 1.4e-06 21.7 0.1 1 1 6.7e-08 4e-06 20.1 0.1 33 84 446 495 401 698 0.67 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_53 - 206 FtsK_SpoIIIE PF01580.13 205 0.0013 11.9 0.2 1 1 7.1e-05 0.0042 10.3 0.0 34 53 4 23 1 28 0.83 # 34009 # 34626 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.519 1_87 - 323 ABC_tran PF00005.22 137 0.0013 12.8 0.0 1 1 1.3e-05 0.0024 11.9 0.0 11 46 61 96 55 117 0.85 # 70022 # 70990 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 3_23 - 565 K_oxygenase PF13434.1 341 2.5e-06 20.3 0.0 1 3 0.0039 0.71 2.4 0.0 187 220 94 125 59 130 0.79 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 K_oxygenase PF13434.1 341 2.5e-06 20.3 0.0 2 3 9.7e-07 0.00018 14.2 0.0 132 231 218 308 203 319 0.82 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 K_oxygenase PF13434.1 341 2.5e-06 20.3 0.0 3 3 0.057 10 -1.4 0.0 132 160 346 369 314 377 0.67 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_14 - 504 AAA_19 PF13245.1 76 2.8e-09 30.4 0.0 1 1 8.4e-11 7.5e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_87 - 323 AAA_19 PF13245.1 76 0.00028 14.4 0.1 1 1 7e-06 0.00063 13.3 0.1 10 35 61 86 51 112 0.76 # 70022 # 70990 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_76 - 816 AAA_10 PF12846.2 304 5.1e-59 193.9 0.2 1 1 9.5e-61 8.5e-59 193.1 0.2 1 296 451 729 451 738 0.93 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_60 - 622 AAA_10 PF12846.2 304 1.9e-18 60.6 0.2 1 1 5.7e-20 5.1e-18 59.2 0.2 2 299 173 549 172 553 0.71 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 3_23 - 565 FAD_oxidored PF12831.2 428 5.3e-06 19.4 3.6 1 1 2.9e-08 5.3e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 DAO PF01266.19 358 8.6e-09 28.4 11.9 1 3 1.4e-08 2.6e-06 20.3 0.8 1 38 99 134 99 191 0.84 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 DAO PF01266.19 358 8.6e-09 28.4 11.9 2 3 0.032 5.7 -0.6 0.1 3 31 273 301 271 307 0.75 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 DAO PF01266.19 358 8.6e-09 28.4 11.9 3 3 9.4e-07 0.00017 14.3 0.5 152 208 314 372 307 433 0.74 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_13 - 83 ThiF PF00899.16 136 0.0012 12.5 0.1 1 1 7.1e-06 0.0013 12.3 0.1 43 111 11 79 5 82 0.81 # 13940 # 14188 # 1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 2_14 - 504 ResIII PF04851.10 184 1.9e-06 21.5 0.0 1 1 5.5e-08 5e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_60 - 622 ResIII PF04851.10 184 0.00019 15.0 0.0 1 1 4.2e-06 0.00038 14.0 0.0 23 57 170 206 129 214 0.74 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_16 - 347 DUF3584 PF12128.3 1201 0.03 5.3 51.1 1 2 0.0051 0.92 0.4 32.3 377 534 86 242 42 246 0.65 # 14222 # 15262 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_16 - 347 DUF3584 PF12128.3 1201 0.03 5.3 51.1 2 2 2e-05 0.0036 8.3 20.6 613 709 225 327 220 345 0.80 # 14222 # 15262 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_14 - 504 Viral_helicase1 PF01443.13 234 1.6e-10 34.6 0.0 1 3 1.4e-05 0.0026 11.0 0.0 2 49 23 73 22 87 0.67 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_14 - 504 Viral_helicase1 PF01443.13 234 1.6e-10 34.6 0.0 2 3 1.8e-05 0.0033 10.7 0.0 56 105 188 234 146 256 0.78 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_14 - 504 Viral_helicase1 PF01443.13 234 1.6e-10 34.6 0.0 3 3 5.2e-05 0.0093 9.2 0.0 176 227 404 462 344 467 0.75 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_23 - 565 NAD_binding_9 PF13454.1 156 5.1e-05 16.8 2.8 1 3 0.0081 1.5 2.3 0.1 1 41 101 135 101 162 0.81 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 NAD_binding_9 PF13454.1 156 5.1e-05 16.8 2.8 2 3 0.034 6 0.3 0.0 134 155 218 241 202 242 0.72 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 NAD_binding_9 PF13454.1 156 5.1e-05 16.8 2.8 3 3 6.6e-06 0.0012 12.4 0.1 112 155 321 366 311 367 0.85 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_60 - 622 DEAD PF00270.24 169 4.2e-05 16.8 0.0 1 1 4.4e-07 7.9e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 3_23 - 565 Pyr_redox PF00070.22 80 6.5e-20 65.1 6.0 1 2 1.4e-06 0.00026 15.2 1.5 1 31 99 129 99 131 0.96 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 Pyr_redox PF00070.22 80 6.5e-20 65.1 6.0 2 2 6.2e-18 1.1e-15 51.6 0.2 1 74 271 345 271 354 0.90 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_60 - 622 DUF853 PF05872.7 504 1.5e-06 20.5 0.0 1 1 1.4e-08 2.4e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_60 - 622 TrwB_AAD_bind PF10412.4 386 3.5e-19 62.3 0.0 1 2 8.9e-13 8e-11 34.8 0.0 10 54 167 211 161 314 0.70 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_60 - 622 TrwB_AAD_bind PF10412.4 386 3.5e-19 62.3 0.0 2 2 6.9e-10 6.2e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_76 - 816 TrwB_AAD_bind PF10412.4 386 4.1e-08 25.9 0.0 1 2 1.5e-05 0.0013 11.1 0.0 6 72 442 517 438 520 0.85 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_76 - 816 TrwB_AAD_bind PF10412.4 386 4.1e-08 25.9 0.0 2 2 5.6e-06 0.0005 12.4 0.1 232 301 643 712 613 731 0.66 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_14 - 504 AAA_11 PF13086.1 236 5.2e-07 23.2 0.1 1 1 1.9e-08 3.4e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_76 - 816 Guanylate_kin PF00625.16 183 0.00026 14.2 0.1 1 3 0.0039 0.69 3.0 0.0 3 26 452 475 450 503 0.86 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_76 - 816 Guanylate_kin PF00625.16 183 0.00026 14.2 0.1 2 3 0.0094 1.7 1.8 0.1 75 115 596 637 580 703 0.83 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_76 - 816 Guanylate_kin PF00625.16 183 0.00026 14.2 0.1 3 3 0.001 0.19 4.9 0.0 75 131 714 770 697 777 0.87 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_60 - 622 T4SS-DNA_transf PF02534.9 469 4.4e-05 15.9 0.0 1 2 5.2e-07 9.3e-05 14.8 0.0 37 115 168 249 125 365 0.73 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_60 - 622 T4SS-DNA_transf PF02534.9 469 4.4e-05 15.9 0.0 2 2 0.097 18 -2.6 0.0 328 389 494 555 474 572 0.74 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 3_18 - 331 AAA_32 PF13654.1 509 0.00017 14.0 0.0 1 2 8.6e-06 0.0015 10.9 0.0 8 81 34 112 26 124 0.86 # 17696 # 18688 # -1 # ID=3_18;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 3_18 - 331 AAA_32 PF13654.1 509 0.00017 14.0 0.0 2 2 0.01 1.8 0.8 0.0 472 504 255 287 242 290 0.90 # 17696 # 18688 # -1 # ID=3_18;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 1_60 - 622 ArgK PF03308.11 267 0.0002 13.9 0.0 1 1 1.8e-06 0.00033 13.2 0.0 12 68 158 209 153 214 0.88 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_4 - 372 tRNA_Me_trans PF03054.11 356 6.8e-05 15.2 0.0 1 2 1.1e-06 0.00021 13.6 0.0 2 71 52 122 51 144 0.74 # 2539 # 3654 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_4 - 372 tRNA_Me_trans PF03054.11 356 6.8e-05 15.2 0.0 2 2 0.042 7.5 -1.4 0.0 193 224 274 305 236 311 0.83 # 2539 # 3654 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 3_23 - 565 AlaDh_PNT_C PF01262.16 168 1.2e-05 18.6 2.9 1 2 0.00051 0.093 6.0 0.8 15 50 92 127 89 130 0.90 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_23 - 565 AlaDh_PNT_C PF01262.16 168 1.2e-05 18.6 2.9 2 2 7.1e-06 0.0013 12.1 0.0 15 58 264 307 256 339 0.85 # 21762 # 23456 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_14 - 504 UvrD-helicase PF00580.16 315 9.8e-17 54.9 3.9 1 2 2.9e-06 0.00052 13.1 0.1 2 38 8 44 7 64 0.81 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_14 - 504 UvrD-helicase PF00580.16 315 9.8e-17 54.9 3.9 2 2 3.4e-15 6.1e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 12424 # 13935 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_76 - 816 AAA_25 PF13481.1 194 0.00062 12.9 0.0 1 1 2.5e-05 0.0015 11.6 0.0 36 86 454 494 447 532 0.82 # 57918 # 60365 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_39 - 262 AAA_25 PF13481.1 194 0.0007 12.7 0.0 1 1 1.8e-05 0.0011 12.1 0.0 42 91 12 51 11 134 0.78 # 24301 # 25086 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_60 - 622 AAA_25 PF13481.1 194 0.00071 12.7 0.0 1 1 3.7e-05 0.0022 11.1 0.0 20 137 159 265 145 272 0.78 # 41892 # 43757 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_87 - 323 AAA_5 PF07728.9 139 1.8e-18 60.4 0.0 1 1 1.6e-20 2.8e-18 59.7 0.0 2 125 64 188 63 197 0.94 # 70022 # 70990 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/ea4d2ce2-5c5e-4665-92ed-3528296172b3 # Target file: checkm_output/bins/pm1721/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1721/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ea4d2ce2-5c5e-4665-92ed-3528296172b3 checkm_output/bins/pm1721/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:59:53 2020 # [ok]