# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_7 - 577 GCD14 PF08704.5 247 0.072 1.8 12.8 1 2 0.00026 0.0021 6.8 4.8 150 218 292 359 286 386 0.73 # 4125 # 5855 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_7 - 577 GCD14 PF08704.5 247 0.072 1.8 12.8 2 2 0.073 0.59 -1.2 1.1 196 227 415 446 383 464 0.43 # 4125 # 5855 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/02f9c57e-ce3d-4552-b5e1-3c2cf5635c98 # Target file: checkm_output/bins/pm1669/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1669/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/02f9c57e-ce3d-4552-b5e1-3c2cf5635c98 checkm_output/bins/pm1669/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:59:16 2020 # [ok]