# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_2 - 188 Methyltransf_12 PF08242.7 99 2.1e-05 18.8 0.0 1 1 2e-07 3.6e-05 18.0 0.0 1 99 55 144 55 144 0.86 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 3_13 - 228 UPF0020 PF01170.13 180 1.3e-05 18.6 0.0 1 2 0.00016 0.03 7.6 0.0 104 119 18 33 7 88 0.73 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 3_13 - 228 UPF0020 PF01170.13 180 1.3e-05 18.6 0.0 2 2 6.2e-05 0.011 9.0 0.0 28 54 163 189 158 221 0.67 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 2_27 - 332 cobW PF02492.14 178 4e-06 20.1 0.0 1 1 4.1e-08 7.5e-06 19.2 0.0 3 45 161 202 159 257 0.77 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_27 - 332 Parvo_NS1 PF01057.12 272 0.0016 11.1 0.0 1 1 1.4e-05 0.0026 10.4 0.0 104 138 148 182 140 188 0.90 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_2 - 188 RrnaAD PF00398.15 262 6.3e-09 28.9 0.0 1 1 4.4e-11 8.1e-09 28.6 0.0 9 113 29 128 24 148 0.89 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 2_24 - 1079 Torsin PF06309.6 127 9.9e-05 16.0 0.0 1 1 1.6e-06 0.00029 14.5 0.0 19 85 460 526 452 537 0.82 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 4_4 - 288 DUF1776 PF08643.5 299 3e-06 20.3 0.0 1 1 2.2e-08 3.9e-06 19.9 0.0 105 197 94 183 43 200 0.92 # 590 # 1453 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_27 - 332 IstB_IS21 PF01695.12 178 5.1e-05 16.5 0.0 1 1 4.5e-07 8.2e-05 15.8 0.0 44 73 155 184 127 201 0.82 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 8_6 - 176 SSB PF00436.20 104 1.6e-40 130.9 0.3 1 1 1.1e-42 2.1e-40 130.6 0.3 1 101 6 109 6 112 0.95 # 4454 # 4981 # -1 # ID=8_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.583 3_2 - 188 Methyltransf_18 PF12847.2 112 5.4e-10 33.6 0.0 1 1 6.3e-12 1.1e-09 32.6 0.0 4 109 53 146 50 148 0.89 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 2_24 - 1079 UvrD_C_2 PF13538.1 104 4.8e-16 52.6 0.1 1 1 2.1e-17 1.9e-15 50.7 0.1 2 102 797 896 796 898 0.76 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_5 - 1757 UvrD_C_2 PF13538.1 104 2.5e-07 24.6 0.7 1 2 0.026 2.4 2.2 0.0 6 44 1227 1265 1223 1295 0.74 # 3042 # 8312 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_5 - 1757 UvrD_C_2 PF13538.1 104 2.5e-07 24.6 0.7 2 2 1e-07 9.5e-06 19.5 0.2 3 102 1341 1444 1339 1446 0.77 # 3042 # 8312 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 9_3 - 181 Pyr_redox_2 PF07992.9 201 0.00012 15.8 0.0 1 2 2.5e-06 0.00046 13.8 0.0 181 199 8 26 3 28 0.82 # 1221 # 1763 # 1 # ID=9_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.635 9_3 - 181 Pyr_redox_2 PF07992.9 201 0.00012 15.8 0.0 2 2 0.052 9.6 -0.3 0.0 10 58 36 83 33 146 0.64 # 1221 # 1763 # 1 # ID=9_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.635 2_27 - 332 AAA_2 PF07724.9 171 1.1e-05 19.2 0.0 1 1 1e-07 1.9e-05 18.4 0.0 3 54 158 204 156 216 0.89 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_24 - 876 DUF87 PF01935.12 229 1.4e-07 25.2 0.0 1 1 8.9e-09 4.1e-07 23.8 0.0 26 222 482 669 468 676 0.77 # 24278 # 26905 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 2_23 - 510 DUF87 PF01935.12 229 2e-07 24.8 0.0 1 1 6.8e-09 3.1e-07 24.2 0.0 10 68 116 170 109 262 0.85 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_27 - 332 DUF87 PF01935.12 229 4.8e-06 20.3 0.0 1 1 1.9e-07 8.8e-06 19.4 0.0 9 61 144 195 138 196 0.78 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 104 DUF87 PF01935.12 229 0.00071 13.2 0.0 1 1 2.2e-05 0.001 12.7 0.0 25 50 72 97 70 102 0.89 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_27 - 332 AAA_22 PF13401.1 131 5e-07 23.7 0.0 1 1 3e-08 1.1e-06 22.6 0.0 3 54 157 202 153 241 0.74 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_35 - 867 AAA_22 PF13401.1 131 0.0002 15.3 0.0 1 1 0.00013 0.0046 10.9 0.0 5 28 492 515 489 549 0.85 # 27737 # 30337 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_24 - 1079 AAA_22 PF13401.1 131 0.0012 12.8 0.2 1 1 0.00036 0.013 9.4 0.2 4 125 494 598 488 603 0.81 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 154 AAA_22 PF13401.1 131 0.0014 12.5 0.1 1 1 8.4e-05 0.0031 11.4 0.1 7 94 16 109 13 119 0.75 # 21790 # 22251 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 1_28 - 104 AAA_22 PF13401.1 131 0.0014 12.5 0.0 1 1 7.3e-05 0.0027 11.6 0.0 3 27 69 93 64 101 0.86 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 5_6 - 87 Rad60-SLD PF11976.3 72 0.0002 14.8 0.1 1 1 1.5e-06 0.00028 14.3 0.1 12 39 41 68 33 77 0.83 # 3367 # 3627 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.418 12_2 - 478 DNA_methylase PF00145.12 335 4.1e-79 259.8 0.0 1 1 4.4e-81 8.1e-79 258.8 0.0 1 331 96 457 96 460 0.86 # 438 # 1871 # 1 # ID=12_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 3_13 - 228 N6_N4_Mtase PF01555.13 231 1.2e-36 120.1 0.0 1 2 1.3e-15 2.4e-13 43.8 0.0 1 114 21 124 21 133 0.89 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 3_13 - 228 N6_N4_Mtase PF01555.13 231 1.2e-36 120.1 0.0 2 2 5.4e-25 9.9e-23 74.5 0.0 169 228 141 200 126 203 0.90 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_6 - 739 AAA_17 PF13207.1 121 0.0006 14.4 0.0 1 1 4.8e-05 0.0022 12.6 0.0 3 27 189 217 187 262 0.68 # 8312 # 10528 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 2_27 - 332 AAA_17 PF13207.1 121 0.00073 14.1 0.1 1 1 3.8e-05 0.0017 12.9 0.1 2 40 161 195 160 229 0.75 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_23 - 510 AAA_17 PF13207.1 121 0.001 13.7 0.1 1 1 9e-05 0.0041 11.7 0.0 4 42 131 191 129 260 0.58 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_35 - 867 AAA_17 PF13207.1 121 0.0017 12.9 4.9 1 1 0.0003 0.014 10.0 0.0 3 21 495 513 494 565 0.80 # 27737 # 30337 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_27 - 332 MobB PF03205.9 140 1.6e-05 18.4 1.9 1 1 3e-07 2.7e-05 17.6 0.3 2 39 160 196 159 201 0.83 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_24 - 876 MobB PF03205.9 140 0.00047 13.6 0.2 1 2 5.4e-05 0.0049 10.3 0.0 4 37 483 515 481 523 0.79 # 24278 # 26905 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 876 MobB PF03205.9 140 0.00047 13.6 0.2 2 2 0.069 6.3 0.3 0.0 25 64 695 732 690 744 0.86 # 24278 # 26905 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_34 - 120 CTP_transf_2 PF01467.21 157 0.0015 12.4 0.0 1 1 8.5e-06 0.0016 12.3 0.0 31 64 6 38 1 93 0.70 # 32113 # 32472 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 2_24 - 1079 PhoH PF02562.11 205 5.9e-09 29.2 4.8 1 2 9.6e-07 8.8e-05 15.5 0.4 5 39 478 514 475 536 0.80 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_24 - 1079 PhoH PF02562.11 205 5.9e-09 29.2 4.8 2 2 3e-06 0.00028 13.9 0.1 120 162 562 605 553 635 0.82 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_27 - 332 PhoH PF02562.11 205 0.00056 12.9 0.0 1 1 1.1e-05 0.001 12.1 0.0 14 45 153 184 143 210 0.79 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_27 - 332 AAA_7 PF12775.2 272 0.00018 14.4 0.0 1 1 2.3e-06 0.00043 13.2 0.0 25 64 150 189 139 209 0.86 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_27 - 332 T2SE PF00437.15 272 5.8e-52 170.0 0.1 1 1 1.1e-53 6.8e-52 169.7 0.1 3 271 10 311 8 312 0.94 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 104 T2SE PF00437.15 272 0.0012 11.5 0.0 1 1 3.6e-05 0.0022 10.6 0.0 111 155 56 97 39 102 0.76 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_23 - 510 T2SE PF00437.15 272 0.0016 11.1 0.1 1 1 4.6e-05 0.0028 10.3 0.1 130 149 128 147 103 160 0.84 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_27 - 332 Zeta_toxin PF06414.7 201 2.8e-06 20.3 0.0 1 1 8e-08 4.9e-06 19.5 0.0 12 51 154 193 145 204 0.86 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_6 - 739 Zeta_toxin PF06414.7 201 0.0014 11.4 0.0 1 1 0.00011 0.0064 9.3 0.0 21 49 190 219 182 236 0.85 # 8312 # 10528 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 1_28 - 104 Zeta_toxin PF06414.7 201 0.0022 10.8 0.0 1 1 4.5e-05 0.0027 10.5 0.0 14 40 68 94 58 103 0.80 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_27 - 332 Arch_ATPase PF01637.13 234 1.6e-05 18.4 0.0 1 1 3.2e-07 3e-05 17.6 0.0 15 68 155 205 149 226 0.87 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 154 Arch_ATPase PF01637.13 234 0.00018 15.0 0.4 1 1 3.4e-06 0.00031 14.2 0.4 23 125 16 109 7 119 0.69 # 21790 # 22251 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 2_27 - 332 AAA_16 PF13191.1 185 1.2e-06 22.3 0.0 1 1 6.9e-08 3.1e-06 21.0 0.0 24 61 158 195 149 274 0.82 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_6 - 739 AAA_16 PF13191.1 185 8.5e-06 19.6 0.0 1 1 8.1e-07 3.7e-05 17.5 0.0 21 60 182 222 179 263 0.81 # 8312 # 10528 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 1_28 - 104 AAA_16 PF13191.1 185 0.00043 14.0 0.1 1 1 1.8e-05 0.00083 13.1 0.0 22 51 68 97 60 102 0.91 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_35 - 867 AAA_16 PF13191.1 185 0.0018 12.0 0.0 1 1 0.00036 0.017 8.9 0.0 25 47 492 514 481 574 0.85 # 27737 # 30337 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_27 - 332 AAA_23 PF13476.1 202 0.00081 13.5 0.0 1 1 1.4e-05 0.0013 12.8 0.0 19 39 158 178 105 184 0.91 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_35 - 867 AAA_23 PF13476.1 202 0.0087 10.1 0.0 1 1 9.5e-05 0.0087 10.1 0.0 22 39 494 511 464 521 0.84 # 27737 # 30337 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_27 - 332 AAA_18 PF13238.1 129 8.6e-06 19.9 0.0 1 1 2e-07 1.8e-05 18.8 0.0 1 29 161 194 161 213 0.77 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_23 - 510 AAA_18 PF13238.1 129 0.00024 15.2 0.0 1 1 5.2e-06 0.00048 14.2 0.0 3 21 131 149 130 238 0.78 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 4_4 - 288 adh_short PF00106.20 167 3.6e-33 108.6 0.3 1 2 8.5e-35 1.6e-32 106.5 0.1 3 165 11 171 9 173 0.93 # 590 # 1453 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 4_4 - 288 adh_short PF00106.20 167 3.6e-33 108.6 0.3 2 2 0.047 8.6 -0.0 0.0 66 110 227 274 205 279 0.66 # 590 # 1453 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_20 - 239 CbiA PF01656.18 195 5.1e-06 19.8 0.7 1 2 0.00041 0.075 6.1 0.1 1 19 3 21 3 24 0.89 # 13533 # 14249 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 2_20 - 239 CbiA PF01656.18 195 5.1e-06 19.8 0.7 2 2 6.6e-06 0.0012 12.0 0.0 110 165 89 142 33 168 0.77 # 13533 # 14249 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 3_2 - 188 Methyltransf_25 PF13649.1 101 0.00021 15.4 0.0 1 1 1.7e-06 0.0003 14.9 0.0 1 101 54 142 54 142 0.81 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 2_27 - 332 KaiC PF06745.8 227 0.00031 13.6 0.0 1 1 3e-06 0.00056 12.8 0.0 16 53 155 190 148 240 0.77 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 154 AAA_14 PF13173.1 128 1.4e-05 18.8 0.1 1 1 2.8e-07 1.7e-05 18.5 0.1 5 87 16 97 13 135 0.69 # 21790 # 22251 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 2_23 - 510 AAA_14 PF13173.1 128 2.3e-05 18.1 0.0 1 2 6.5e-06 0.00039 14.1 0.0 6 89 130 213 125 234 0.76 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_23 - 510 AAA_14 PF13173.1 128 2.3e-05 18.1 0.0 2 2 0.065 4 1.1 0.0 53 81 340 372 300 391 0.57 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_27 - 332 AAA_14 PF13173.1 128 0.0005 13.7 0.1 1 2 0.0067 0.41 4.3 0.0 64 96 135 165 98 166 0.69 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_27 - 332 AAA_14 PF13173.1 128 0.0005 13.7 0.1 2 2 9.5e-05 0.0058 10.3 0.0 2 35 158 191 157 213 0.80 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_27 - 332 GvpD PF07088.6 484 4.7e-06 18.9 0.0 1 1 7.7e-08 7.1e-06 18.3 0.0 10 89 158 241 150 262 0.76 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 154 GvpD PF07088.6 484 0.00035 12.7 0.0 1 1 9.5e-06 0.00087 11.4 0.0 138 181 92 134 82 143 0.86 # 21790 # 22251 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 1_20 - 154 AAA_29 PF13555.1 62 0.0016 11.8 0.0 1 1 3e-05 0.0027 11.0 0.0 17 40 8 30 1 35 0.79 # 21790 # 22251 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 2_27 - 332 AAA_29 PF13555.1 62 0.0018 11.6 0.0 1 1 4.7e-05 0.0043 10.4 0.0 19 43 157 178 145 188 0.75 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_24 - 1079 AAA PF00004.24 132 6.1e-06 20.2 0.9 1 1 1.3e-07 2.4e-05 18.3 0.1 4 111 500 600 497 612 0.73 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 4_4 - 288 KR PF08659.5 181 9.7e-13 41.9 0.1 1 1 1.2e-14 2.2e-12 40.7 0.1 4 167 12 172 10 185 0.86 # 590 # 1453 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_27 - 332 Sigma54_activat PF00158.21 168 1.6e-05 18.2 0.0 1 1 4.7e-07 2.8e-05 17.4 0.0 14 54 150 190 138 213 0.82 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 154 Sigma54_activat PF00158.21 168 0.0003 14.0 0.0 1 2 3.9e-05 0.0024 11.1 0.0 16 62 7 54 1 61 0.79 # 21790 # 22251 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 1_20 - 154 Sigma54_activat PF00158.21 168 0.0003 14.0 0.0 2 2 0.055 3.4 0.9 0.0 94 120 71 97 65 107 0.81 # 21790 # 22251 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 2_24 - 1079 Sigma54_activat PF00158.21 168 0.00031 14.0 0.4 1 1 1.4e-05 0.00087 12.5 0.4 8 130 480 600 473 606 0.79 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 154 MMR_HSR1 PF01926.18 116 4.7e-05 17.1 0.0 1 1 6.3e-07 5.8e-05 16.8 0.0 2 90 16 111 15 140 0.69 # 21790 # 22251 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 2_27 - 332 MMR_HSR1 PF01926.18 116 0.0008 13.2 0.0 1 1 1.4e-05 0.0013 12.5 0.0 2 41 161 205 160 310 0.84 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_2 - 188 N6_Mtase PF02384.11 311 0.00028 13.8 0.0 1 2 1.6e-05 0.003 10.4 0.0 28 64 32 68 21 83 0.87 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 3_2 - 188 N6_Mtase PF02384.11 311 0.00028 13.8 0.0 2 2 0.018 3.3 0.4 0.0 127 137 114 124 103 134 0.82 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 2_27 - 332 DUF258 PF03193.11 161 0.0002 14.3 0.0 1 1 2e-06 0.00037 13.5 0.0 29 61 151 184 129 224 0.81 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_23 - 510 TraG-D_C PF12696.2 128 2.5e-21 69.7 0.0 1 1 4.4e-23 4.1e-21 69.0 0.0 1 127 350 471 350 472 0.80 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_6 - 739 TraG-D_C PF12696.2 128 1.4e-20 67.2 0.0 1 1 2.8e-22 2.6e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 8312 # 10528 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 2_27 - 332 AAA_33 PF13671.1 143 0.00067 13.3 0.0 1 1 5.9e-06 0.0011 12.6 0.0 2 26 161 188 160 256 0.81 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_2 - 188 Methyltransf_26 PF13659.1 117 4.6e-14 46.2 0.0 1 1 9e-16 8.2e-14 45.4 0.0 2 114 52 147 51 150 0.91 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 3_13 - 228 Methyltransf_26 PF13659.1 117 2.6e-12 40.6 0.1 1 2 7e-08 6.4e-06 20.0 0.0 54 114 4 71 2 74 0.73 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 3_13 - 228 Methyltransf_26 PF13659.1 117 2.6e-12 40.6 0.1 2 2 1.9e-07 1.8e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 2_24 - 1079 AAA_30 PF13604.1 196 8.3e-53 172.6 6.7 1 1 6.7e-54 3.1e-52 170.8 5.4 1 191 477 659 477 663 0.97 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_5 - 1757 AAA_30 PF13604.1 196 3.6e-44 144.4 14.3 1 2 2.6e-05 0.0012 12.2 3.1 7 142 420 547 416 571 0.84 # 3042 # 8312 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_5 - 1757 AAA_30 PF13604.1 196 3.6e-44 144.4 14.3 2 2 2.3e-43 1.1e-41 136.4 1.8 1 186 968 1156 968 1162 0.94 # 3042 # 8312 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 2_27 - 332 AAA_30 PF13604.1 196 0.00028 14.3 0.1 1 2 9.5e-05 0.0043 10.4 0.1 11 51 151 190 145 197 0.80 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_27 - 332 AAA_30 PF13604.1 196 0.00028 14.3 0.1 2 2 0.047 2.2 1.6 0.0 121 178 204 258 191 272 0.77 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_6 - 739 AAA_30 PF13604.1 196 0.0011 12.3 0.0 1 1 5.2e-05 0.0024 11.2 0.0 21 57 188 224 180 230 0.85 # 8312 # 10528 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 2_27 - 332 FtsK_SpoIIIE PF01580.13 205 1.6e-06 21.5 0.0 1 1 8.5e-08 3.1e-06 20.5 0.0 38 64 158 184 139 191 0.81 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 104 FtsK_SpoIIIE PF01580.13 205 2.6e-06 20.8 0.0 1 1 8.8e-08 3.2e-06 20.5 0.0 9 66 39 98 32 101 0.80 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_24 - 876 FtsK_SpoIIIE PF01580.13 205 2e-05 17.9 0.1 1 2 1e-05 0.00037 13.7 0.0 39 63 476 504 463 507 0.84 # 24278 # 26905 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 876 FtsK_SpoIIIE PF01580.13 205 2e-05 17.9 0.1 2 2 0.057 2.1 1.5 0.0 75 166 530 625 529 637 0.79 # 24278 # 26905 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 2_35 - 867 FtsK_SpoIIIE PF01580.13 205 2.1e-05 17.8 0.0 1 1 1.4e-06 5e-05 16.6 0.0 21 62 462 515 445 522 0.82 # 27737 # 30337 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_23 - 510 FtsK_SpoIIIE PF01580.13 205 0.0012 12.1 0.0 1 1 5.7e-05 0.0021 11.3 0.0 39 59 124 147 95 153 0.78 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 3_2 - 188 MTS PF05175.9 170 1.6e-09 31.1 0.0 1 1 1.2e-11 2.2e-09 30.7 0.0 31 141 50 149 41 166 0.84 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 3_2 - 188 Methyltrans_SAM PF10672.4 286 0.0017 11.0 0.0 1 1 1.3e-05 0.0024 10.5 0.0 196 261 113 173 100 180 0.78 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 3_2 - 188 Met_10 PF02475.11 200 0.00094 12.5 0.0 1 1 7e-06 0.0013 12.1 0.0 99 189 48 132 38 145 0.78 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 2_27 - 332 ABC_tran PF00005.22 137 2.8e-06 21.4 0.0 1 1 5e-08 4.5e-06 20.8 0.0 6 45 153 192 150 257 0.87 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_35 - 867 ABC_tran PF00005.22 137 0.0012 12.9 0.0 1 1 4.6e-05 0.0042 11.2 0.0 14 38 494 518 481 550 0.83 # 27737 # 30337 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_27 - 332 ATP-synt_ab PF00006.20 215 0.001 12.4 0.0 1 1 8.8e-06 0.0016 11.7 0.0 16 62 159 205 151 247 0.86 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_13 - 228 Cons_hypoth95 PF03602.10 183 1.9e-05 17.9 0.0 1 2 0.00032 0.058 6.5 0.0 113 146 19 54 5 81 0.66 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 3_13 - 228 Cons_hypoth95 PF03602.10 183 1.9e-05 17.9 0.0 2 2 4e-05 0.0073 9.4 0.0 41 62 162 183 145 218 0.78 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_5 - 1757 AAA_19 PF13245.1 76 3.3e-07 23.8 2.0 1 1 1.7e-08 1e-06 22.2 0.5 7 76 981 1047 974 1047 0.74 # 3042 # 8312 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 2_27 - 332 AAA_19 PF13245.1 76 0.0012 12.4 0.1 1 1 4.2e-05 0.0026 11.3 0.1 5 48 153 191 149 224 0.78 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_24 - 1079 AAA_19 PF13245.1 76 0.0047 10.5 3.7 1 2 0.00084 0.051 7.2 0.2 2 75 485 551 484 552 0.75 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_24 - 1079 AAA_19 PF13245.1 76 0.0047 10.5 3.7 2 2 0.041 2.5 1.7 0.0 17 32 706 721 705 731 0.82 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 4_4 - 288 RmlD_sub_bind PF04321.12 287 0.0014 11.3 0.0 1 1 1.4e-05 0.0025 10.5 0.0 3 69 11 100 8 123 0.84 # 590 # 1453 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 4_4 - 288 NAD_binding_10 PF13460.1 183 3.2e-05 17.7 0.0 1 1 3.4e-07 6.2e-05 16.8 0.0 3 145 13 186 12 213 0.71 # 590 # 1453 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_24 - 1079 Helicase_RecD PF05127.9 177 2.9e-05 17.5 4.3 1 2 0.00065 0.12 5.7 0.1 122 146 498 522 482 531 0.74 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_24 - 1079 Helicase_RecD PF05127.9 177 2.9e-05 17.5 4.3 2 2 9.9e-06 0.0018 11.7 0.1 76 114 549 585 531 646 0.74 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_24 - 876 AAA_10 PF12846.2 304 3.2e-49 161.7 0.0 1 1 1.8e-50 5.5e-49 160.9 0.0 1 294 479 768 479 774 0.89 # 24278 # 26905 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 2_35 - 867 AAA_10 PF12846.2 304 4.3e-35 115.3 0.1 1 1 4.8e-36 1.5e-34 113.6 0.0 2 292 492 772 491 780 0.84 # 27737 # 30337 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_6 - 739 AAA_10 PF12846.2 304 2.5e-10 33.9 0.0 1 1 1.5e-10 4.6e-09 29.8 0.0 3 296 187 494 186 500 0.68 # 8312 # 10528 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 2_23 - 510 AAA_10 PF12846.2 304 9.9e-07 22.2 0.1 1 2 4.1e-05 0.0013 12.0 0.1 3 41 128 166 126 177 0.92 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_23 - 510 AAA_10 PF12846.2 304 9.9e-07 22.2 0.1 2 2 0.00068 0.021 8.0 0.0 214 286 339 414 307 431 0.75 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_28 - 104 AAA_10 PF12846.2 304 2.7e-05 17.5 0.0 1 2 0.012 0.37 3.9 0.0 273 290 23 40 8 52 0.80 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_28 - 104 AAA_10 PF12846.2 304 2.7e-05 17.5 0.0 2 2 4.3e-05 0.0013 11.9 0.0 2 24 71 93 70 98 0.87 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_27 - 332 AAA_10 PF12846.2 304 0.00048 13.3 0.0 1 1 2.5e-05 0.00075 12.7 0.0 3 29 160 185 158 233 0.81 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 4_4 - 288 adh_short_C2 PF13561.1 241 6.5e-19 62.4 0.0 1 1 4.6e-21 8.5e-19 62.0 0.0 5 182 17 188 15 220 0.90 # 590 # 1453 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 2_27 - 332 ResIII PF04851.10 184 1.1e-05 19.0 0.0 1 1 9.8e-08 1.8e-05 18.4 0.0 22 61 148 196 104 202 0.81 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_2 - 188 Methyltransf_31 PF13847.1 152 1.1e-06 22.0 0.0 1 1 7.6e-09 1.4e-06 21.7 0.0 5 119 52 162 48 183 0.83 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 2_24 - 1079 Viral_helicase1 PF01443.13 234 1.7e-14 47.6 5.7 1 2 4.9e-08 4.5e-06 20.1 0.0 3 104 499 605 497 635 0.72 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_24 - 1079 Viral_helicase1 PF01443.13 234 1.7e-14 47.6 5.7 2 2 6e-11 5.5e-09 29.6 0.5 157 234 818 899 774 899 0.74 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_5 - 1757 Viral_helicase1 PF01443.13 234 0.00056 13.2 0.1 1 2 0.00028 0.026 7.8 0.0 1 118 988 1121 988 1212 0.52 # 3042 # 8312 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 1_5 - 1757 Viral_helicase1 PF01443.13 234 0.00056 13.2 0.1 2 2 0.013 1.2 2.3 0.0 171 234 1387 1447 1342 1447 0.63 # 3042 # 8312 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 2_27 - 332 DUF2075 PF09848.4 352 0.00017 14.4 0.0 1 1 1.3e-06 0.00024 13.9 0.0 1 32 158 187 158 216 0.76 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_27 - 332 DEAD PF00270.24 169 5.4e-06 19.7 0.0 1 1 5.7e-08 1e-05 18.8 0.0 13 70 157 211 144 242 0.78 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_6 - 739 TrwB_AAD_bind PF10412.4 386 4.8e-150 493.1 0.0 1 1 1.9e-151 5.9e-150 492.9 0.0 2 386 172 561 171 561 0.99 # 8312 # 10528 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 2_23 - 510 TrwB_AAD_bind PF10412.4 386 1.9e-118 389.1 0.0 1 1 7.4e-120 2.3e-118 388.9 0.0 1 385 112 490 112 491 0.95 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_24 - 876 TrwB_AAD_bind PF10412.4 386 7.4e-07 21.8 0.1 1 1 1.4e-07 4.4e-06 19.2 0.0 15 53 479 517 470 547 0.80 # 24278 # 26905 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 2_35 - 867 TrwB_AAD_bind PF10412.4 386 1.7e-06 20.6 1.6 1 2 3e-06 9e-05 14.9 0.0 16 51 492 527 484 536 0.92 # 27737 # 30337 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_35 - 867 TrwB_AAD_bind PF10412.4 386 1.7e-06 20.6 1.6 2 2 0.0084 0.26 3.5 0.0 102 168 741 806 720 812 0.79 # 27737 # 30337 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_27 - 332 TrwB_AAD_bind PF10412.4 386 2.5e-05 16.8 0.1 1 1 1.3e-06 3.9e-05 16.1 0.1 14 49 157 191 150 202 0.81 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 104 TrwB_AAD_bind PF10412.4 386 0.00019 13.9 0.0 1 2 0.073 2.2 0.5 0.0 294 335 22 63 15 68 0.79 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_28 - 104 TrwB_AAD_bind PF10412.4 386 0.00019 13.9 0.0 2 2 1.7e-05 0.00051 12.4 0.0 5 43 60 98 56 102 0.86 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_5 - 1757 AAA_11 PF13086.1 236 0.00028 14.2 3.2 1 1 1.8e-06 0.00034 14.0 0.0 2 75 969 1039 968 1059 0.81 # 3042 # 8312 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.601 2_27 - 332 Sigma54_activ_2 PF14532.1 138 4.4e-06 20.6 0.0 1 1 1e-07 9.2e-06 19.5 0.0 14 65 151 202 145 212 0.92 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 154 Sigma54_activ_2 PF14532.1 138 0.00023 15.0 0.0 1 1 4e-06 0.00037 14.3 0.0 55 109 54 110 3 122 0.68 # 21790 # 22251 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.370 2_23 - 510 T4SS-DNA_transf PF02534.9 469 9.9e-12 37.8 0.0 1 1 2.4e-13 1.4e-11 37.3 0.0 263 426 313 472 297 500 0.74 # 15608 # 17137 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.440 1_6 - 739 T4SS-DNA_transf PF02534.9 469 8.5e-10 31.5 0.0 1 1 3.1e-11 1.9e-09 30.3 0.0 250 362 362 477 198 501 0.76 # 8312 # 10528 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 1_24 - 876 T4SS-DNA_transf PF02534.9 469 5.4e-05 15.6 0.0 1 2 0.00065 0.04 6.2 0.0 105 185 533 607 470 623 0.86 # 24278 # 26905 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 876 T4SS-DNA_transf PF02534.9 469 5.4e-05 15.6 0.0 2 2 0.00033 0.02 7.2 0.0 319 378 711 769 663 771 0.90 # 24278 # 26905 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 3_2 - 188 TIGR00755 TIGR00755 256 4.6e-09 29.3 0.0 1 1 3.4e-11 6.2e-09 28.9 0.0 8 105 29 123 25 134 0.90 # 461 # 1024 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 3_13 - 228 MethyltransfD12 PF02086.10 260 0.001 12.3 0.0 1 2 0.022 4 0.5 0.0 178 188 21 31 14 91 0.83 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 3_13 - 228 MethyltransfD12 PF02086.10 260 0.001 12.3 0.0 2 2 4e-05 0.0073 9.5 0.0 20 46 163 189 148 197 0.78 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 2_27 - 332 Pox_A32 PF04665.7 241 0.00018 14.6 0.0 1 1 5.1e-06 0.00031 13.8 0.0 12 46 157 191 150 210 0.85 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 104 Pox_A32 PF04665.7 241 0.00031 13.8 0.0 1 2 0.052 3.1 0.7 0.0 2 28 39 64 38 69 0.76 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_28 - 104 Pox_A32 PF04665.7 241 0.00031 13.8 0.0 2 2 2.2e-05 0.0013 11.8 0.0 8 42 65 99 58 101 0.90 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 1_24 - 876 Pox_A32 PF04665.7 241 0.0015 11.5 0.0 1 1 6.9e-05 0.0042 10.1 0.0 7 38 473 504 469 519 0.85 # 24278 # 26905 # -1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 2_24 - 1079 PIF1 PF05970.9 364 3.7e-06 19.8 0.1 1 2 1.3e-07 2.5e-05 17.1 0.0 2 65 478 537 477 588 0.85 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_24 - 1079 PIF1 PF05970.9 364 3.7e-06 19.8 0.1 2 2 0.089 16 -2.1 0.0 334 363 795 823 783 824 0.84 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_27 - 332 GTP_EFTU PF00009.22 188 0.0004 13.6 0.2 1 1 3.5e-06 0.00064 12.9 0.2 2 32 157 187 156 205 0.83 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_27 - 332 RNA_helicase PF00910.17 107 3.6e-05 17.7 0.1 1 2 7e-06 0.00064 13.7 0.0 1 25 161 185 161 242 0.75 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_27 - 332 RNA_helicase PF00910.17 107 3.6e-05 17.7 0.1 2 2 0.054 4.9 1.2 0.1 69 100 290 322 281 328 0.78 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_28 - 104 RNA_helicase PF00910.17 107 0.00036 14.5 0.0 1 1 8.1e-06 0.00075 13.5 0.0 1 29 73 101 73 103 0.91 # 28181 # 28492 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.436 2_27 - 332 UPF0079 PF02367.12 123 1.1e-05 18.8 0.0 1 1 1.2e-07 2.2e-05 17.8 0.0 9 45 152 188 145 193 0.85 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_27 - 332 Myosin_head PF00063.16 689 0.00029 12.7 0.0 1 1 2.2e-06 0.00041 12.2 0.0 84 110 157 183 147 209 0.90 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_27 - 332 NACHT PF05729.7 166 0.00016 15.1 0.0 1 1 1.9e-06 0.00035 14.0 0.0 1 27 159 185 159 188 0.90 # 21706 # 22701 # -1 # ID=2_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_13 - 228 Methyltransf_15 PF09445.5 164 0.00052 13.3 0.0 1 2 0.012 2.3 1.5 0.0 53 79 4 29 2 33 0.91 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 3_13 - 228 Methyltransf_15 PF09445.5 164 0.00052 13.3 0.0 2 2 4.2e-05 0.0078 9.5 0.0 3 31 166 194 164 209 0.86 # 6749 # 7432 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 2_24 - 1079 Herpes_Helicase PF02689.9 819 3.9e-05 15.3 0.0 1 2 0.0014 0.25 2.7 0.0 173 208 539 574 515 584 0.81 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_24 - 1079 Herpes_Helicase PF02689.9 819 3.9e-05 15.3 0.0 2 2 9.3e-06 0.0017 9.9 0.0 739 782 850 894 831 914 0.80 # 17137 # 20373 # 1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/a1f57bf3-dc18-4c00-841d-e2419b889210 # Target file: checkm_output/bins/pm1663/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1663/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a1f57bf3-dc18-4c00-841d-e2419b889210 checkm_output/bins/pm1663/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:59:15 2020 # [ok]