# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_85 - 188 Methyltransf_12 PF08242.7 99 1.1e-05 18.8 0.0 1 1 2e-07 1.9e-05 18.0 0.0 1 99 55 144 55 144 0.86 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_76 - 228 UPF0020 PF01170.13 180 6.3e-06 18.7 0.0 1 2 0.00016 0.015 7.6 0.0 104 119 18 33 7 88 0.73 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_76 - 228 UPF0020 PF01170.13 180 6.3e-06 18.7 0.0 2 2 5.9e-05 0.0055 9.1 0.0 28 54 163 188 158 220 0.66 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_85 - 188 RrnaAD PF00398.15 262 3.2e-09 28.9 0.0 1 1 4.4e-11 4.1e-09 28.6 0.0 9 113 29 128 24 148 0.89 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_67 - 162 3HCDH_N PF02737.13 180 0.00047 12.7 0.2 1 1 8.8e-06 0.00083 11.8 0.2 1 32 2 33 2 36 0.93 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 GIDA PF01134.17 392 7e-06 17.9 0.3 1 1 1.3e-07 1.2e-05 17.1 0.3 2 32 3 33 2 54 0.87 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_87 - 180 SSB PF00436.20 104 7.3e-41 131.1 0.4 1 1 9.8e-43 9.2e-41 130.8 0.4 1 101 6 109 6 112 0.96 # 70006 # 70545 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.591 1_85 - 188 Methyltransf_18 PF12847.2 112 2.8e-10 33.6 0.0 1 1 6.3e-12 5.9e-10 32.6 0.0 4 109 53 146 50 148 0.89 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_46 - 1757 UvrD_C_2 PF13538.1 104 3.8e-08 26.3 0.8 1 2 0.012 1.2 2.2 0.0 6 44 1227 1265 1223 1295 0.74 # 33539 # 38809 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_46 - 1757 UvrD_C_2 PF13538.1 104 3.8e-08 26.3 0.8 2 2 1.4e-08 1.3e-06 21.3 0.2 3 102 1341 1444 1339 1446 0.79 # 33539 # 38809 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_67 - 162 Pyr_redox_2 PF07992.9 201 2.5e-14 46.4 0.0 1 1 3.6e-16 3.4e-14 46.0 0.0 2 144 3 159 2 161 0.76 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_21 - 877 DUF87 PF01935.12 229 2.3e-07 23.7 0.0 1 1 6.9e-09 6.5e-07 22.2 0.0 26 222 483 670 469 677 0.77 # 11980 # 14610 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_76 - 228 Methyltransf_11 PF08241.7 95 0.00066 13.0 0.0 1 2 0.0024 0.23 4.9 0.0 78 93 53 68 48 70 0.84 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_76 - 228 Methyltransf_11 PF08241.7 95 0.00066 13.0 0.0 2 2 0.0014 0.13 5.7 0.0 5 54 172 220 168 226 0.82 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_76 - 228 N6_N4_Mtase PF01555.13 231 1.9e-36 118.4 0.0 1 2 1.9e-15 1.8e-13 43.3 0.0 1 114 21 124 21 133 0.89 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_76 - 228 N6_N4_Mtase PF01555.13 231 1.9e-36 118.4 0.0 2 2 1.2e-24 1.1e-22 73.4 0.0 169 228 141 200 126 203 0.90 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_45 - 745 AAA_17 PF13207.1 121 0.00031 14.4 0.0 1 1 1.2e-05 0.0011 12.6 0.0 3 27 189 217 187 262 0.68 # 31305 # 33539 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_21 - 877 MobB PF03205.9 140 0.00027 13.5 0.2 1 2 5.4e-05 0.0025 10.3 0.0 4 37 484 516 482 524 0.79 # 11980 # 14610 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_21 - 877 MobB PF03205.9 140 0.00027 13.5 0.2 2 2 0.068 3.2 0.3 0.0 25 64 696 733 691 746 0.86 # 11980 # 14610 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_45 - 745 MobB PF03205.9 140 0.0011 11.5 0.0 1 1 5.3e-05 0.0025 10.3 0.0 7 34 192 219 188 225 0.89 # 31305 # 33539 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_63 - 311 Shikimate_DH PF01488.15 135 0.00091 12.2 0.0 1 1 1.8e-05 0.0017 11.3 0.0 48 88 80 116 78 137 0.85 # 50281 # 51213 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.501 1_11 - 124 Zeta_toxin PF06414.7 201 6e-06 18.3 0.1 1 1 2.1e-07 9.6e-06 17.6 0.1 14 39 86 111 75 117 0.83 # 7261 # 7632 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.395 1_45 - 745 Zeta_toxin PF06414.7 201 0.0007 11.5 0.0 1 1 7.1e-05 0.0033 9.3 0.0 21 49 190 219 182 236 0.85 # 31305 # 33539 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_67 - 162 NAD_binding_8 PF13450.1 68 1.1e-09 31.1 0.4 1 1 1.8e-11 1.7e-09 30.4 0.4 1 36 5 40 5 82 0.79 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 F420_oxidored PF03807.12 96 0.00077 12.7 0.7 1 1 1.5e-05 0.0014 11.9 0.7 1 31 2 29 2 35 0.89 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 FAD_binding_3 PF01494.14 356 4e-05 15.6 0.1 1 2 1.2e-06 0.00012 14.0 0.1 3 34 2 33 1 35 0.92 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 FAD_binding_3 PF01494.14 356 4e-05 15.6 0.1 2 2 0.051 4.8 -1.2 0.0 110 143 75 110 53 127 0.74 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_69 - 339 OCD_Mu_crystall PF02423.10 314 0.00033 12.2 0.0 1 1 6e-06 0.00057 11.5 0.0 132 191 3 59 1 82 0.83 # 54788 # 55804 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.466 1_45 - 745 AAA_16 PF13191.1 185 3.5e-06 19.9 0.0 1 1 2e-07 1.9e-05 17.5 0.0 21 60 182 222 179 263 0.81 # 31305 # 33539 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_69 - 339 GFO_IDH_MocA PF01408.17 120 3.5e-17 55.9 0.0 1 1 6.6e-19 6.2e-17 55.1 0.0 3 115 3 114 1 119 0.91 # 54788 # 55804 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.466 1_85 - 188 Methyltransf_25 PF13649.1 101 0.00011 15.4 0.0 1 1 1.7e-06 0.00016 14.9 0.0 1 101 54 142 54 142 0.81 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_67 - 162 HI0933_like PF03486.9 409 2.9e-10 31.9 0.2 1 2 2.4e-11 2.3e-09 29.0 0.1 2 36 2 36 1 49 0.95 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 HI0933_like PF03486.9 409 2.9e-10 31.9 0.2 2 2 0.0078 0.74 0.9 0.0 125 165 94 136 76 140 0.70 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 FAD_binding_2 PF00890.19 417 1.4e-07 23.4 0.1 1 2 3.2e-09 3e-07 22.4 0.1 2 45 3 47 2 58 0.89 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 FAD_binding_2 PF00890.19 417 1.4e-07 23.4 0.1 2 2 0.077 7.2 -2.0 0.0 179 204 113 138 81 151 0.63 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 Thi4 PF01946.12 230 2.2e-07 23.0 0.0 1 1 2.6e-09 2.5e-07 22.8 0.0 19 64 2 49 1 87 0.87 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 Pyr_redox_3 PF13738.1 203 5.7e-19 61.8 0.0 1 1 7.4e-21 6.9e-19 61.5 0.0 1 149 4 147 4 160 0.88 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_85 - 188 N6_Mtase PF02384.11 311 0.00014 13.8 0.0 1 2 1.6e-05 0.0015 10.4 0.0 28 64 32 68 21 83 0.87 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_85 - 188 N6_Mtase PF02384.11 311 0.00014 13.8 0.0 2 2 0.018 1.7 0.4 0.0 127 137 114 124 103 134 0.82 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_45 - 745 TraG-D_C PF12696.2 128 7.2e-21 67.2 0.0 1 1 1.4e-22 1.3e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 31305 # 33539 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_11 - 124 DnaB_C PF03796.10 259 0.0007 11.3 0.0 1 1 1.3e-05 0.0012 10.5 0.0 21 44 90 113 75 120 0.84 # 7261 # 7632 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.395 1_85 - 188 Methyltransf_26 PF13659.1 117 2.4e-14 46.2 0.0 1 1 9e-16 4.2e-14 45.4 0.0 2 114 52 147 51 150 0.91 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_76 - 228 Methyltransf_26 PF13659.1 117 1.4e-12 40.6 0.1 1 2 7e-08 3.3e-06 20.0 0.0 54 114 4 71 2 74 0.73 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_76 - 228 Methyltransf_26 PF13659.1 117 1.4e-12 40.6 0.1 2 2 1.9e-07 9.1e-06 18.6 0.0 4 44 167 206 164 222 0.82 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_46 - 1757 AAA_30 PF13604.1 196 1.3e-44 144.9 14.6 1 3 0.094 4.4 -0.4 0.0 41 86 223 269 219 281 0.83 # 33539 # 38809 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_46 - 1757 AAA_30 PF13604.1 196 1.3e-44 144.9 14.6 2 3 1.9e-05 0.00088 11.7 3.6 7 133 420 540 416 561 0.82 # 33539 # 38809 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_46 - 1757 AAA_30 PF13604.1 196 1.3e-44 144.9 14.6 3 3 6.4e-44 3e-42 137.2 1.6 1 186 968 1156 968 1160 0.94 # 33539 # 38809 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_45 - 745 AAA_30 PF13604.1 196 0.00065 12.1 0.0 1 1 2.6e-05 0.0012 11.2 0.0 21 57 188 224 180 230 0.85 # 31305 # 33539 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_21 - 877 FtsK_SpoIIIE PF01580.13 205 1.4e-05 17.5 0.1 1 2 4.1e-06 0.00019 13.7 0.0 39 63 477 505 464 508 0.84 # 11980 # 14610 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_21 - 877 FtsK_SpoIIIE PF01580.13 205 1.4e-05 17.5 0.1 2 2 0.03 1.4 1.1 0.0 75 166 531 626 530 669 0.82 # 11980 # 14610 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_11 - 124 FtsK_SpoIIIE PF01580.13 205 0.0003 13.1 0.1 1 1 8.2e-06 0.00039 12.7 0.1 22 63 70 113 52 120 0.81 # 7261 # 7632 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.395 1_85 - 188 MTS PF05175.9 170 8.2e-10 31.1 0.0 1 1 1.2e-11 1.1e-09 30.7 0.0 31 141 50 149 41 166 0.84 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_85 - 188 Methyltrans_SAM PF10672.4 286 0.00086 11.0 0.0 1 1 1.3e-05 0.0012 10.5 0.0 196 261 113 173 100 180 0.78 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_85 - 188 Met_10 PF02475.11 200 0.00048 12.5 0.0 1 1 7e-06 0.00066 12.1 0.0 99 189 48 132 38 145 0.78 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_67 - 162 Lycopene_cycl PF05834.7 374 0.00036 12.3 0.0 1 2 2.8e-05 0.0026 9.5 0.0 2 36 3 35 2 61 0.86 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 Lycopene_cycl PF05834.7 374 0.00036 12.3 0.0 2 2 0.01 0.95 1.0 0.0 100 155 92 152 77 159 0.67 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_76 - 228 Cons_hypoth95 PF03602.10 183 5.8e-06 18.6 0.0 1 2 0.00031 0.029 6.6 0.0 113 146 19 54 5 82 0.66 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_76 - 228 Cons_hypoth95 PF03602.10 183 5.8e-06 18.6 0.0 2 2 2.4e-05 0.0022 10.2 0.0 41 76 162 199 145 220 0.73 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_67 - 162 UDPG_MGDP_dh_N PF03721.9 185 0.00092 11.4 0.1 1 1 1.5e-05 0.0014 10.8 0.1 1 33 1 33 1 40 0.94 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_46 - 1757 AAA_19 PF13245.1 76 1e-07 24.5 1.4 1 1 8.9e-09 4.2e-07 22.5 0.3 7 76 981 1047 974 1047 0.74 # 33539 # 38809 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_11 - 124 AAA_19 PF13245.1 76 0.00091 11.8 0.0 1 1 3.6e-05 0.0017 11.0 0.0 11 38 90 114 82 121 0.77 # 7261 # 7632 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.395 1_67 - 162 NAD_binding_10 PF13460.1 183 0.0015 11.4 2.3 1 1 2.5e-05 0.0024 10.7 0.9 1 31 3 32 3 37 0.93 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_21 - 877 AAA_10 PF12846.2 304 4.1e-49 160.4 0.0 1 1 1.5e-50 7.1e-49 159.6 0.0 1 294 480 769 480 775 0.89 # 11980 # 14610 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_45 - 745 AAA_10 PF12846.2 304 1.4e-10 33.8 0.0 1 1 5.1e-11 2.4e-09 29.8 0.0 3 296 187 494 186 500 0.68 # 31305 # 33539 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_67 - 162 FAD_oxidored PF12831.2 428 6.7e-09 28.0 0.7 1 2 1.3e-10 1.2e-08 27.2 0.5 2 38 3 39 2 64 0.90 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 FAD_oxidored PF12831.2 428 6.7e-09 28.0 0.7 2 2 0.058 5.5 -1.3 0.0 289 315 81 107 41 133 0.65 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 DAO PF01266.19 358 1.8e-10 33.0 3.1 1 2 3.5e-10 3.3e-08 25.5 0.8 2 35 3 37 2 57 0.87 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 DAO PF01266.19 358 1.8e-10 33.0 3.1 2 2 8.8e-05 0.0083 7.8 0.1 165 200 96 134 77 140 0.85 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_85 - 188 Methyltransf_31 PF13847.1 152 5.8e-07 22.0 0.0 1 1 7.6e-09 7.2e-07 21.7 0.0 5 119 52 162 48 183 0.83 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_67 - 162 FMO-like PF00743.14 532 1.6e-19 62.2 0.0 1 1 3.9e-21 1.8e-19 62.0 0.0 3 176 2 161 1 161 0.94 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_63 - 311 FMO-like PF00743.14 532 1.6e-11 35.8 0.0 1 1 3.9e-13 1.8e-11 35.6 0.0 269 427 53 207 6 240 0.78 # 50281 # 51213 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.501 1_67 - 162 NAD_binding_9 PF13454.1 156 6.3e-10 31.9 0.8 1 2 1.9e-07 1.8e-05 17.4 0.2 1 44 4 41 4 57 0.90 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 NAD_binding_9 PF13454.1 156 6.3e-10 31.9 0.8 2 2 2.9e-06 0.00027 13.5 0.0 116 155 93 135 53 136 0.72 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 Pyr_redox PF00070.22 80 0.00031 14.0 0.1 1 1 1.1e-05 0.001 12.3 0.0 1 35 2 36 2 43 0.93 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_45 - 745 TrwB_AAD_bind PF10412.4 386 2.5e-150 493.1 0.0 1 1 9.9e-152 3.1e-150 492.8 0.0 2 386 172 561 171 561 0.99 # 31305 # 33539 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_21 - 877 TrwB_AAD_bind PF10412.4 386 3.8e-07 21.8 0.1 1 2 7.2e-08 2.2e-06 19.2 0.0 15 53 480 518 471 548 0.80 # 11980 # 14610 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_21 - 877 TrwB_AAD_bind PF10412.4 386 3.8e-07 21.8 0.1 2 2 0.061 1.9 -0.3 0.0 261 317 714 770 685 773 0.92 # 11980 # 14610 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_11 - 124 TrwB_AAD_bind PF10412.4 386 0.00044 11.7 0.1 1 1 3e-05 0.00094 10.6 0.1 5 40 78 113 74 119 0.86 # 7261 # 7632 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.395 1_46 - 1757 AAA_11 PF13086.1 236 0.00028 13.3 3.6 1 1 3.1e-06 0.00029 13.2 0.0 2 75 969 1039 968 1059 0.80 # 33539 # 38809 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.603 1_45 - 745 T4SS-DNA_transf PF02534.9 469 4.2e-10 31.5 0.0 1 1 2.1e-11 9.9e-10 30.3 0.0 250 361 362 476 198 500 0.76 # 31305 # 33539 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_21 - 877 T4SS-DNA_transf PF02534.9 469 0.00028 12.3 0.0 1 2 0.0047 0.22 2.8 0.0 105 182 534 605 471 624 0.82 # 11980 # 14610 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_21 - 877 T4SS-DNA_transf PF02534.9 469 0.00028 12.3 0.0 2 2 0.00021 0.0099 7.2 0.0 319 378 712 770 662 772 0.89 # 11980 # 14610 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_85 - 188 TIGR00755 TIGR00755 256 2.4e-09 29.3 0.0 1 1 3.4e-11 3.2e-09 28.9 0.0 8 105 29 123 25 134 0.90 # 68534 # 69097 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.582 1_67 - 162 Amino_oxidase PF01593.19 450 3.6e-05 15.7 0.0 1 2 3.5e-05 0.0033 9.3 0.0 2 28 11 37 10 43 0.97 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_67 - 162 Amino_oxidase PF01593.19 450 3.6e-05 15.7 0.0 2 2 0.00092 0.087 4.6 0.0 220 261 89 133 80 147 0.74 # 54035 # 54520 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.521 1_76 - 228 MethyltransfD12 PF02086.10 260 0.0005 12.4 0.0 1 2 0.022 2.1 0.5 0.0 178 188 21 31 14 89 0.83 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_76 - 228 MethyltransfD12 PF02086.10 260 0.0005 12.4 0.0 2 2 3.7e-05 0.0035 9.6 0.0 20 46 163 189 148 198 0.78 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_21 - 877 Pox_A32 PF04665.7 241 0.00079 11.5 0.0 1 1 2.3e-05 0.0022 10.1 0.0 7 38 474 505 470 520 0.85 # 11980 # 14610 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_11 - 124 AAA_25 PF13481.1 194 0.00079 11.7 0.1 1 1 1.2e-05 0.0011 11.2 0.1 35 61 90 116 80 122 0.86 # 7261 # 7632 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.395 1_76 - 228 Methyltransf_15 PF09445.5 164 0.00043 12.7 0.0 1 2 0.012 1.2 1.5 0.0 53 79 4 29 2 33 0.91 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 1_76 - 228 Methyltransf_15 PF09445.5 164 0.00043 12.7 0.0 2 2 7e-05 0.0065 8.8 0.0 3 31 166 194 164 208 0.86 # 62135 # 62818 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.582 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/8bf24d4f-b4a1-46ff-bb95-a1baf29c7c3e # Target file: checkm_output/bins/pm1654/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1654/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8bf24d4f-b4a1-46ff-bb95-a1baf29c7c3e checkm_output/bins/pm1654/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:59:10 2020 # [ok]