# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_10 - 146 AAA_23 PF13476.1 202 0.00022 11.3 4.5 1 1 2.3e-05 0.00025 11.2 4.5 128 202 45 131 13 135 0.56 # 5775 # 6212 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_11 - 183 DUF3584 PF12128.3 1201 0.0043 4.1 28.7 1 1 0.00047 0.0052 3.8 28.7 409 534 46 171 40 177 0.80 # 6472 # 7020 # 1 # ID=1_11;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/5512ca17-91a6-4676-a04d-45f4616be229 # Target file: checkm_output/bins/pm1653/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1653/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5512ca17-91a6-4676-a04d-45f4616be229 checkm_output/bins/pm1653/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:59:06 2020 # [ok]