# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_9 - 234 UPF0020 PF01170.13 180 4.3e-06 19.5 0.0 1 2 5.3e-05 0.0063 9.2 0.0 103 120 17 34 5 75 0.83 # 4998 # 5699 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.607 2_9 - 234 UPF0020 PF01170.13 180 4.3e-06 19.5 0.0 2 2 9.4e-05 0.011 8.4 0.0 28 51 170 193 165 227 0.75 # 4998 # 5699 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.607 1_25 - 181 cobW PF02492.14 178 0.00088 11.9 0.0 1 1 1.3e-05 0.0015 11.1 0.0 2 21 2 21 1 29 0.81 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_3 - 209 MipZ PF09140.6 261 2e-21 69.3 0.5 1 2 1.2e-12 1.4e-10 33.8 0.0 2 53 2 52 1 60 0.89 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_3 - 209 MipZ PF09140.6 261 2e-21 69.3 0.5 2 2 1.6e-12 1.9e-10 33.4 0.0 87 140 65 118 58 128 0.92 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_3 - 209 YhjQ PF06564.7 244 2.7e-05 16.7 0.3 1 2 1.8e-06 0.00021 13.8 0.3 4 38 3 37 1 50 0.89 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_3 - 209 YhjQ PF06564.7 244 2.7e-05 16.7 0.3 2 2 0.029 3.5 0.0 0.0 108 144 69 103 44 113 0.78 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_100 - 181 SSB PF00436.20 104 4.8e-42 135.3 0.3 1 1 5.1e-44 6e-42 134.9 0.3 1 99 6 105 6 113 0.97 # 83700 # 84242 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.622 1_41 - 1753 UvrD_C_2 PF13538.1 104 8.7e-08 25.5 0.3 1 1 4.4e-09 5.1e-07 23.0 0.1 3 102 1339 1442 1335 1444 0.75 # 34150 # 39408 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.616 1_62 - 880 DUF87 PF01935.12 229 5.4e-06 19.5 0.0 1 2 0.056 6.6 -0.4 0.2 113 171 312 362 304 396 0.60 # 56686 # 59325 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.546 1_62 - 880 DUF87 PF01935.12 229 5.4e-06 19.5 0.0 2 2 3e-07 3.6e-05 16.8 0.0 26 222 484 674 479 681 0.81 # 56686 # 59325 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.546 1_25 - 181 AAA_22 PF13401.1 131 1.8e-05 18.0 0.0 1 1 9.4e-07 5.5e-05 16.5 0.0 6 50 2 50 1 105 0.72 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_41 - 1753 AAA_22 PF13401.1 131 0.00023 14.5 0.0 1 2 0.009 0.53 3.6 0.0 82 121 497 535 464 537 0.70 # 34150 # 39408 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.616 1_41 - 1753 AAA_22 PF13401.1 131 0.00023 14.5 0.0 2 2 0.00079 0.047 7.0 0.0 3 28 985 1010 982 1063 0.79 # 34150 # 39408 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.616 1_18 - 478 DNA_methylase PF00145.12 335 2.6e-79 259.8 0.0 1 1 4.4e-81 5.2e-79 258.8 0.0 1 331 96 457 96 460 0.86 # 13616 # 15049 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.481 1_3 - 209 SRP54 PF00448.17 196 3e-07 23.2 0.1 1 1 1.5e-08 1.8e-06 20.7 0.1 4 98 2 91 1 134 0.80 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_9 - 234 N6_N4_Mtase PF01555.13 231 6.5e-33 107.2 0.0 1 2 3.3e-13 3.8e-11 36.0 0.0 1 113 21 130 21 137 0.85 # 4998 # 5699 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.607 2_9 - 234 N6_N4_Mtase PF01555.13 231 6.5e-33 107.2 0.0 2 2 2e-23 2.4e-21 69.4 0.0 170 227 149 206 135 210 0.92 # 4998 # 5699 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.607 1_25 - 181 AAA_17 PF13207.1 121 2.8e-06 21.3 0.0 1 1 9.6e-08 5.7e-06 20.3 0.0 1 32 2 34 2 175 0.59 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_3 - 209 AAA_17 PF13207.1 121 2.6e-05 18.2 0.0 1 1 8.5e-07 5e-05 17.3 0.0 9 77 11 84 9 205 0.76 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_3 - 209 MobB PF03205.9 140 7e-05 15.7 0.1 1 1 1.6e-06 0.00019 14.3 0.0 10 42 11 41 1 46 0.79 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_3 - 209 ArsA_ATPase PF02374.10 305 3.7e-08 25.8 0.4 1 2 1.2e-09 1.4e-07 24.0 0.1 3 48 3 48 1 69 0.85 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_3 - 209 ArsA_ATPase PF02374.10 305 3.7e-08 25.8 0.4 2 2 0.053 6.3 -1.2 0.0 121 135 69 85 47 86 0.75 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_25 - 181 Cytidylate_kin2 PF13189.1 179 0.0012 11.9 0.0 1 2 9.1e-05 0.011 8.8 0.0 1 22 2 23 2 44 0.81 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_25 - 181 Cytidylate_kin2 PF13189.1 179 0.0012 11.9 0.0 2 2 0.026 3.1 0.8 0.0 110 135 96 122 94 136 0.74 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_25 - 181 Zeta_toxin PF06414.7 201 9.4e-05 14.7 0.0 1 2 2.1e-05 0.0025 10.1 0.0 19 50 3 32 1 39 0.78 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_25 - 181 Zeta_toxin PF06414.7 201 9.4e-05 14.7 0.0 2 2 0.0045 0.53 2.4 0.0 94 123 73 102 57 160 0.77 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_3 - 209 VirC1 PF07015.6 231 3.2e-09 29.3 0.0 1 1 5.9e-11 7e-09 28.2 0.0 3 172 2 164 1 206 0.75 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_3 - 209 Fer4_NifH PF00142.13 273 8.8e-05 14.9 0.0 1 1 2.3e-06 0.00027 13.3 0.0 8 38 9 39 2 46 0.89 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_42 - 771 AAA_16 PF13191.1 185 3.1e-06 20.4 0.0 1 1 1.4e-07 1.7e-05 18.0 0.0 20 56 181 218 179 254 0.78 # 39408 # 41720 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 1_25 - 181 AAA_18 PF13238.1 129 2.3e-09 30.8 0.0 1 1 3.9e-11 4.6e-09 29.8 0.0 1 126 3 134 3 137 0.76 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_3 - 209 CbiA PF01656.18 195 2.8e-22 72.2 0.0 1 1 4.7e-24 5.6e-22 71.2 0.0 1 154 3 137 3 178 0.78 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_59 - 134 CobU PF02283.11 167 0.00074 12.1 0.7 1 1 8.4e-06 0.00099 11.7 0.1 64 112 80 129 63 133 0.69 # 55226 # 55627 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.527 1_82 - 278 N6_Mtase PF02384.11 311 3.8e-12 39.0 0.0 1 1 5.2e-14 6.2e-12 38.3 0.0 25 117 139 237 130 264 0.85 # 71566 # 72399 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_42 - 771 TraG-D_C PF12696.2 128 1.2e-19 63.7 0.0 1 1 2.2e-21 2.6e-19 62.5 0.0 1 127 419 541 419 542 0.88 # 39408 # 41720 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 1_3 - 209 AAA_31 PF13614.1 157 5e-06 19.7 0.0 1 2 2.5e-07 3e-05 17.1 0.0 2 42 2 42 1 55 0.88 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_3 - 209 AAA_31 PF13614.1 157 5e-06 19.7 0.0 2 2 0.055 6.5 -0.2 0.0 109 127 68 86 62 113 0.68 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_25 - 181 AAA_33 PF13671.1 143 3.6e-10 33.0 0.0 1 1 4.3e-12 5e-10 32.6 0.0 2 127 3 130 2 151 0.73 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 2_9 - 234 Methyltransf_26 PF13659.1 117 3.2e-11 36.5 0.2 1 2 6.5e-07 3.8e-05 16.9 0.0 63 113 13 70 3 86 0.73 # 4998 # 5699 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.607 2_9 - 234 Methyltransf_26 PF13659.1 117 3.2e-11 36.5 0.2 2 2 3.9e-07 2.3e-05 17.6 0.1 4 44 174 213 171 228 0.80 # 4998 # 5699 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.607 1_82 - 278 Methyltransf_26 PF13659.1 117 6.9e-05 16.0 0.1 1 1 2.6e-06 0.00015 14.9 0.1 3 70 171 243 170 270 0.82 # 71566 # 72399 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_41 - 1753 AAA_30 PF13604.1 196 1.7e-45 148.1 6.7 1 2 4.3e-07 5.1e-05 16.0 0.9 9 126 423 535 421 560 0.86 # 34150 # 39408 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.616 1_41 - 1753 AAA_30 PF13604.1 196 1.7e-45 148.1 6.7 2 2 4.2e-43 4.9e-41 133.6 0.5 2 186 970 1157 969 1161 0.94 # 34150 # 39408 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.616 1_62 - 880 FtsK_SpoIIIE PF01580.13 205 0.00013 14.6 0.0 1 1 2.7e-06 0.00032 13.3 0.0 39 63 480 506 466 508 0.85 # 56686 # 59325 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.546 2_9 - 234 Cons_hypoth95 PF03602.10 183 3.5e-06 19.6 0.0 1 2 0.00012 0.015 7.8 0.0 113 170 19 78 12 86 0.73 # 4998 # 5699 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.607 2_9 - 234 Cons_hypoth95 PF03602.10 183 3.5e-06 19.6 0.0 2 2 3.1e-05 0.0037 9.8 0.0 20 60 149 188 142 225 0.73 # 4998 # 5699 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.607 1_41 - 1753 AAA_19 PF13245.1 76 2.7e-06 20.3 0.5 1 1 6.8e-08 2.7e-06 20.3 0.5 8 74 983 1046 975 1049 0.71 # 34150 # 39408 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.616 1_25 - 181 AAA_19 PF13245.1 76 0.0005 13.0 0.0 1 1 5.3e-05 0.0021 11.0 0.0 15 33 5 22 2 36 0.85 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_3 - 209 AAA_19 PF13245.1 76 0.00066 12.6 0.1 1 2 0.00029 0.011 8.6 0.0 20 48 11 35 9 44 0.84 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_3 - 209 AAA_19 PF13245.1 76 0.00066 12.6 0.1 2 2 0.067 2.6 1.1 0.0 42 62 135 155 118 180 0.75 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_62 - 880 AAA_10 PF12846.2 304 9.1e-46 149.7 0.0 1 1 5e-47 1.5e-45 149.1 0.0 1 294 481 773 481 779 0.85 # 56686 # 59325 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.546 1_42 - 771 AAA_10 PF12846.2 304 1.9e-09 30.5 0.0 1 2 2e-05 0.0006 12.4 0.0 3 43 187 227 186 260 0.92 # 39408 # 41720 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 1_42 - 771 AAA_10 PF12846.2 304 1.9e-09 30.5 0.0 2 2 1.7e-06 4.9e-05 16.0 0.0 201 296 398 494 282 499 0.85 # 39408 # 41720 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 1_3 - 209 AAA_10 PF12846.2 304 0.00019 14.1 0.0 1 1 1e-05 0.0003 13.4 0.0 11 39 11 39 3 67 0.90 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_6 - 131 AAA_10 PF12846.2 304 0.0011 11.6 0.1 1 1 0.00017 0.005 9.4 0.0 237 264 10 37 3 47 0.87 # 4594 # 4986 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.560 1_42 - 771 TrwB_AAD_bind PF10412.4 386 8.5e-149 488.4 0.0 1 1 1.8e-150 1.1e-148 488.1 0.0 2 386 172 561 171 561 0.99 # 39408 # 41720 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 1_62 - 880 TrwB_AAD_bind PF10412.4 386 1.8e-05 16.6 0.2 1 1 8e-07 4.7e-05 15.2 0.0 16 91 482 553 474 569 0.71 # 56686 # 59325 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.546 1_41 - 1753 AAA_11 PF13086.1 236 7e-05 15.6 2.1 1 1 9.3e-07 0.00011 15.0 0.0 2 72 970 1037 969 1064 0.82 # 34150 # 39408 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.616 1_42 - 771 T4SS-DNA_transf PF02534.9 469 1.6e-08 26.7 0.0 1 2 0.035 4.1 -1.1 0.0 128 199 260 330 249 359 0.73 # 39408 # 41720 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 1_42 - 771 T4SS-DNA_transf PF02534.9 469 1.6e-08 26.7 0.0 2 2 4.7e-10 5.5e-08 24.9 0.0 275 392 393 506 363 559 0.74 # 39408 # 41720 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.561 1_62 - 880 Pox_A32 PF04665.7 241 8.8e-05 15.0 0.0 1 1 1.5e-06 0.00018 14.0 0.0 6 40 474 508 470 523 0.82 # 56686 # 59325 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.546 1_25 - 181 AAA_24 PF13479.1 213 0.00012 14.9 0.0 1 1 1.2e-06 0.00015 14.5 0.0 6 33 3 34 1 99 0.87 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_25 - 181 NACHT PF05729.7 166 9.7e-05 15.2 0.1 1 1 2.1e-06 0.00025 13.9 0.0 2 21 2 21 1 29 0.91 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_3 - 209 AAA_25 PF13481.1 194 0.00016 14.3 0.1 1 1 3.1e-06 0.00036 13.1 0.0 42 87 10 44 3 90 0.78 # 2383 # 3009 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_9 - 234 Methyltransf_15 PF09445.5 164 0.00089 12.0 0.0 1 2 0.023 2.7 0.6 0.0 53 80 4 30 2 38 0.91 # 4998 # 5699 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.607 2_9 - 234 Methyltransf_15 PF09445.5 164 0.00089 12.0 0.0 2 2 7e-05 0.0082 8.8 0.0 3 30 173 200 171 213 0.90 # 4998 # 5699 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.607 1_25 - 181 AAA_28 PF13521.1 163 0.00018 14.6 0.0 1 1 4.7e-06 0.00056 13.0 0.0 2 29 3 33 2 58 0.77 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_25 - 181 APS_kinase PF01583.15 157 1.5e-05 17.8 0.0 1 2 1e-05 0.0012 11.6 0.0 4 24 2 22 1 30 0.89 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 1_25 - 181 APS_kinase PF01583.15 157 1.5e-05 17.8 0.0 2 2 0.0021 0.25 4.1 0.1 34 72 107 147 91 157 0.86 # 21623 # 22165 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/e647ec5f-3a49-4cb9-9c76-9a43d4542336 # Target file: checkm_output/bins/pm1629/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1629/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/e647ec5f-3a49-4cb9-9c76-9a43d4542336 checkm_output/bins/pm1629/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:58:54 2020 # [ok]