# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_11 - 325 Mg_chelatase PF01078.16 207 1.8e-08 27.6 0.0 1 2 0.00038 0.025 7.6 0.0 25 45 32 52 27 60 0.89 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 4_11 - 325 Mg_chelatase PF01078.16 207 1.8e-08 27.6 0.0 2 2 3e-07 2e-05 17.7 0.0 92 157 86 149 79 158 0.89 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 1_62 - 247 Mg_chelatase PF01078.16 207 0.00088 12.3 0.3 1 1 5e-05 0.0033 10.4 0.0 23 39 101 117 97 125 0.89 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_36 - 488 Mg_chelatase PF01078.16 207 0.0011 12.0 0.1 1 1 3.4e-05 0.0023 11.0 0.1 1 47 215 267 215 281 0.79 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 4_9 - 303 Eno-Rase_NADH_b PF12242.3 78 1.1e-05 19.0 0.1 1 1 1.1e-07 2.2e-05 18.1 0.1 33 66 52 83 45 93 0.80 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 2_5 - 372 ATP_bind_3 PF01171.15 182 0.00029 14.2 0.0 1 2 5.2e-05 0.01 9.2 0.0 1 59 52 110 52 129 0.78 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_5 - 372 ATP_bind_3 PF01171.15 182 0.00029 14.2 0.0 2 2 0.005 0.99 2.7 0.0 134 161 232 260 207 262 0.72 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_49 - 332 cobW PF02492.14 178 4.3e-06 20.1 0.0 1 1 4.1e-08 8e-06 19.2 0.0 3 45 161 202 159 257 0.77 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 Parvo_NS1 PF01057.12 272 0.0017 11.1 0.0 1 1 1.4e-05 0.0028 10.4 0.0 104 138 148 182 140 188 0.90 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 1 5 0.019 3.7 1.5 8.8 39 98 89 152 77 158 0.72 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 2 5 0.00084 0.16 5.9 3.1 50 100 146 196 143 199 0.89 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 3 5 2.6e-06 0.00051 13.9 12.2 19 100 216 294 201 297 0.85 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 4 5 0.00031 0.06 7.3 2.1 62 105 284 327 282 330 0.90 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 5 5 0.0059 1.1 3.1 1.6 82 105 304 327 296 345 0.51 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 4_9 - 303 DUF1776 PF08643.5 299 0.0002 14.4 0.0 1 1 1.5e-06 0.0003 13.8 0.0 107 195 152 234 146 239 0.84 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 1_62 - 247 IstB_IS21 PF01695.12 178 6.3e-66 215.0 0.0 1 1 1.1e-67 1e-65 214.3 0.0 2 177 55 230 54 231 0.99 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 IstB_IS21 PF01695.12 178 5.4e-05 16.5 0.0 1 1 8.9e-07 8.7e-05 15.8 0.0 44 73 155 184 127 201 0.82 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_52 - 262 MipZ PF09140.6 261 3.5e-10 33.2 0.0 1 2 6.6e-10 1.3e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_52 - 262 MipZ PF09140.6 261 3.5e-10 33.2 0.0 2 2 0.00031 0.062 6.2 0.0 89 122 117 150 89 166 0.74 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_55 - 301 3HCDH_N PF02737.13 180 4.9e-07 23.4 0.7 1 1 2.1e-08 2.1e-06 21.3 0.7 1 40 6 45 6 116 0.91 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 5_7 - 565 3HCDH_N PF02737.13 180 0.0062 10.0 6.4 1 2 0.0095 0.93 2.9 2.4 1 30 99 128 99 134 0.93 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 3HCDH_N PF02737.13 180 0.0062 10.0 6.4 2 2 0.00018 0.018 8.6 0.1 2 39 272 309 271 348 0.73 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 GIDA PF01134.17 392 5e-08 26.0 6.6 1 3 6.9e-10 6.8e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 GIDA PF01134.17 392 5e-08 26.0 6.6 2 3 0.076 7.4 -0.9 0.0 3 31 273 301 271 315 0.84 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 GIDA PF01134.17 392 5e-08 26.0 6.6 3 3 0.037 3.6 0.1 0.1 349 385 393 429 387 433 0.77 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_55 - 301 GIDA PF01134.17 392 0.0098 8.6 3.4 1 1 0.00014 0.014 8.1 3.4 2 72 7 78 6 90 0.89 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 3_14 - 504 UvrD_C_2 PF13538.1 104 1.5e-10 35.0 0.0 1 1 3.5e-12 6.8e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 5_7 - 565 Pyr_redox_2 PF07992.9 201 1.6e-43 142.8 0.0 1 1 3.2e-45 6.4e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_36 - 488 AAA_2 PF07724.9 171 6.9e-06 19.9 0.0 1 1 5.8e-07 3.8e-05 17.5 0.0 6 92 245 325 240 333 0.90 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 4_11 - 325 AAA_2 PF07724.9 171 1e-05 19.4 0.0 1 1 3.7e-07 2.4e-05 18.1 0.0 6 131 32 152 30 181 0.85 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 2_49 - 332 AAA_2 PF07724.9 171 1.1e-05 19.2 0.0 1 1 3.1e-07 2e-05 18.4 0.0 3 54 158 204 156 216 0.89 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_32 - 622 DUF87 PF01935.12 229 1.7e-08 28.4 0.0 1 1 6.5e-10 4.2e-08 27.1 0.0 24 63 173 211 168 269 0.87 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_16 - 816 DUF87 PF01935.12 229 7.3e-08 26.3 0.2 1 1 2.3e-09 1.5e-07 25.3 0.2 24 154 452 587 432 660 0.71 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_49 - 332 DUF87 PF01935.12 229 5.2e-06 20.3 0.0 1 1 1.5e-07 9.5e-06 19.4 0.0 9 61 144 195 138 196 0.78 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 5_2 - 331 AAA_22 PF13401.1 131 9.9e-17 55.2 0.0 1 1 5.6e-18 1.8e-16 54.3 0.0 7 126 64 190 59 194 0.94 # 700 # 1692 # -1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 1_62 - 247 AAA_22 PF13401.1 131 1.5e-07 25.5 0.3 1 1 7.4e-06 0.00024 15.1 0.3 4 113 100 192 97 204 0.68 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 AAA_22 PF13401.1 131 5.4e-07 23.7 0.0 1 1 3.7e-08 1.2e-06 22.6 0.0 3 54 157 202 153 241 0.74 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 3_14 - 504 AAA_22 PF13401.1 131 6.4e-05 17.0 0.0 1 2 0.00016 0.0052 10.8 0.0 8 68 23 92 17 122 0.63 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 AAA_22 PF13401.1 131 6.4e-05 17.0 0.0 2 2 0.03 0.97 3.4 0.0 82 124 189 225 164 229 0.77 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_32 - 622 AAA_22 PF13401.1 131 0.00025 15.1 0.0 1 1 2.5e-05 0.00082 13.4 0.0 3 68 171 231 166 287 0.83 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_36 - 488 AAA_22 PF13401.1 131 0.00094 13.2 1.1 1 1 0.0018 0.058 7.4 0.8 69 121 283 344 243 354 0.66 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 5_7 - 565 DFP PF04127.10 185 0.0015 12.0 2.4 1 2 0.00039 0.077 6.4 0.4 28 51 105 128 99 156 0.83 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 DFP PF04127.10 185 0.0015 12.0 2.4 2 2 0.0014 0.27 4.7 0.1 32 53 281 302 276 336 0.77 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_41 - 476 DNA_methylase PF00145.12 335 1.2e-10 34.9 0.0 1 2 2.1e-11 4e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 39854 # 41281 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_41 - 476 DNA_methylase PF00145.12 335 1.2e-10 34.9 0.0 2 2 0.0031 0.6 2.9 0.0 290 330 407 448 341 452 0.73 # 39854 # 41281 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_37 - 93 Ribosomal_L2_C PF03947.13 130 0.00098 12.8 0.0 1 1 6.3e-06 0.0012 12.5 0.0 74 111 44 80 24 82 0.86 # 38014 # 38292 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.441 5_7 - 565 NAD_binding_7 PF13241.1 103 6.7e-07 23.4 1.2 1 2 5.4e-05 0.011 9.9 0.2 9 38 99 128 96 184 0.89 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 NAD_binding_7 PF13241.1 103 6.7e-07 23.4 1.2 2 2 1.4e-05 0.0028 11.8 0.1 8 41 270 306 264 380 0.74 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_62 - 247 AAA_17 PF13207.1 121 4.5e-05 18.1 0.3 1 1 2e-06 0.00013 16.7 0.1 2 49 103 154 102 223 0.67 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_36 - 488 AAA_17 PF13207.1 121 0.00025 15.8 0.0 1 1 1.9e-05 0.0012 13.5 0.0 2 63 245 299 245 388 0.63 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_49 - 332 AAA_17 PF13207.1 121 0.00079 14.1 0.1 1 1 2.8e-05 0.0019 12.9 0.1 2 40 161 195 160 229 0.75 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 MobB PF03205.9 140 1.7e-05 18.4 1.9 1 1 4.5e-07 2.9e-05 17.6 0.3 2 39 160 196 159 201 0.83 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 MobB PF03205.9 140 0.00031 14.3 0.0 1 1 1.2e-05 0.0008 13.0 0.0 3 32 103 132 101 139 0.94 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_32 - 622 MobB PF03205.9 140 0.001 12.6 0.0 1 1 5.2e-05 0.0034 10.9 0.0 4 34 176 206 175 214 0.90 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_52 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 1 2 3e-07 5.9e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_52 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 2 2 0.029 5.7 -0.3 0.0 124 136 124 136 106 143 0.79 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_62 - 247 PhoH PF02562.11 205 3.5e-07 23.5 0.0 1 1 2.1e-08 1.3e-06 21.6 0.0 13 78 94 158 82 162 0.80 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_14 - 504 PhoH PF02562.11 205 5e-06 19.7 0.2 1 2 0.0039 0.26 4.3 0.0 22 45 22 45 4 61 0.78 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 PhoH PF02562.11 205 5e-06 19.7 0.2 2 2 2.2e-05 0.0015 11.7 0.0 122 168 196 240 193 255 0.83 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_49 - 332 PhoH PF02562.11 205 0.0006 12.9 0.0 1 1 1.7e-05 0.0011 12.1 0.0 14 45 153 184 143 210 0.79 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 AAA_7 PF12775.2 272 0.00019 14.4 0.0 1 1 2.3e-06 0.00046 13.2 0.0 25 64 150 189 139 209 0.86 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 T2SE PF00437.15 272 6.2e-52 170.0 0.1 1 1 7.4e-54 7.2e-52 169.7 0.1 3 271 10 311 8 312 0.94 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_32 - 622 T2SE PF00437.15 272 0.00036 13.3 0.0 1 1 5.9e-06 0.00057 12.6 0.0 116 162 163 206 124 227 0.78 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_49 - 332 Zeta_toxin PF06414.7 201 3e-06 20.3 0.0 1 1 5.4e-08 5.3e-06 19.5 0.0 12 51 154 193 145 204 0.86 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_36 - 488 Zeta_toxin PF06414.7 201 0.00033 13.6 0.0 1 1 6.3e-06 0.00062 12.7 0.0 18 52 244 277 239 314 0.90 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 5_7 - 565 NAD_binding_8 PF13450.1 68 6.9e-05 16.7 1.2 1 2 3.5e-07 6.9e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 NAD_binding_8 PF13450.1 68 6.9e-05 16.7 1.2 2 2 0.041 8 0.5 0.2 1 25 274 298 274 303 0.81 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_55 - 301 F420_oxidored PF03807.12 96 4.2e-06 21.0 0.6 1 1 1.3e-07 1.3e-05 19.5 0.2 2 78 7 79 6 98 0.82 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 5_7 - 565 F420_oxidored PF03807.12 96 0.014 9.7 4.1 1 2 0.0047 0.46 4.9 1.2 2 31 100 126 99 131 0.87 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 F420_oxidored PF03807.12 96 0.014 9.7 4.1 2 2 0.015 1.5 3.3 0.1 1 34 271 300 271 323 0.87 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_5 - 372 TIGR02432 TIGR02432 189 7.9e-05 16.2 0.1 1 2 1.1e-05 0.0021 11.5 0.0 1 58 52 109 52 119 0.85 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_5 - 372 TIGR02432 TIGR02432 189 7.9e-05 16.2 0.1 2 2 0.0084 1.6 2.1 0.0 140 165 235 260 207 262 0.76 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_62 - 247 Arch_ATPase PF01637.13 234 7.1e-06 19.7 0.1 1 1 4.4e-07 4.3e-05 17.1 0.1 18 94 99 167 85 198 0.70 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 Arch_ATPase PF01637.13 234 1.7e-05 18.4 0.0 1 1 3.2e-07 3.2e-05 17.6 0.0 15 68 155 205 149 226 0.87 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 AAA_16 PF13191.1 185 1.3e-06 22.3 0.0 1 1 1e-07 3.4e-06 21.0 0.0 24 61 158 195 149 274 0.82 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 AAA_16 PF13191.1 185 8.9e-06 19.6 0.3 1 1 3.6e-06 0.00012 16.0 0.0 10 41 86 117 75 133 0.88 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 5_2 - 331 AAA_16 PF13191.1 185 4e-05 17.5 0.0 1 1 1.8e-05 0.00058 13.7 0.0 8 103 45 145 43 186 0.62 # 700 # 1692 # -1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 1_16 - 816 AAA_16 PF13191.1 185 5.4e-05 17.1 0.2 1 1 9.5e-06 0.00031 14.6 0.2 20 63 447 490 439 659 0.64 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_39 - 206 AAA_16 PF13191.1 185 8.3e-05 16.5 0.1 1 1 3.8e-06 0.00012 15.9 0.1 27 68 11 54 3 168 0.79 # 38525 # 39142 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 4_11 - 325 AAA_16 PF13191.1 185 0.00051 13.9 0.1 1 1 4.3e-05 0.0014 12.5 0.0 18 64 21 69 10 126 0.78 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 2_49 - 332 AAA_23 PF13476.1 202 0.00087 13.5 0.0 1 1 7.2e-06 0.0014 12.8 0.0 19 39 158 178 105 184 0.91 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 AAA_18 PF13238.1 129 9.2e-06 19.9 0.0 1 1 2e-07 1.9e-05 18.8 0.0 1 29 161 194 161 213 0.77 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 AAA_18 PF13238.1 129 0.00041 14.5 1.6 1 2 0.061 5.9 1.1 0.0 99 121 43 65 20 78 0.76 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 AAA_18 PF13238.1 129 0.00041 14.5 1.6 2 2 6.5e-05 0.0064 10.7 0.6 1 21 103 123 103 207 0.70 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 4_9 - 303 adh_short PF00106.20 167 3.3e-34 112.1 0.1 1 1 2.1e-36 4e-34 111.8 0.1 3 166 60 225 58 226 0.97 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 4_12 - 223 AAA_13 PF13166.1 712 0.0052 9.1 20.8 1 2 1.7e-06 0.00017 14.0 12.3 333 457 6 132 3 140 0.91 # 10694 # 11362 # 1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.501 4_12 - 223 AAA_13 PF13166.1 712 0.0052 9.1 20.8 2 2 0.024 2.3 0.3 1.2 366 397 169 201 149 222 0.35 # 10694 # 11362 # 1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.501 3_16 - 347 AAA_13 PF13166.1 712 0.013 7.7 36.6 1 2 0.0038 0.37 2.9 28.3 283 457 85 259 71 272 0.58 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 AAA_13 PF13166.1 712 0.013 7.7 36.6 2 2 4.7e-05 0.0046 9.2 23.2 287 474 160 339 154 345 0.78 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_52 - 262 CbiA PF01656.18 195 2.3e-30 99.3 0.0 1 1 4.5e-32 2.9e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_62 - 247 CbiA PF01656.18 195 0.00072 12.8 1.6 1 2 0.085 5.6 0.1 0.1 13 26 17 30 17 33 0.89 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 CbiA PF01656.18 195 0.00072 12.8 1.6 2 2 4.4e-05 0.0029 10.9 0.0 9 31 110 132 103 134 0.92 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_16 - 816 CbiA PF01656.18 195 0.00077 12.7 0.0 1 1 2.5e-05 0.0016 11.7 0.0 3 49 455 517 454 593 0.60 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_62 - 247 KaiC PF06745.8 227 4.7e-05 16.4 0.2 1 2 0.00069 0.068 6.1 0.0 16 56 97 136 81 144 0.81 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 KaiC PF06745.8 227 4.7e-05 16.4 0.2 2 2 0.0001 0.01 8.8 0.1 98 153 143 196 134 217 0.83 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 KaiC PF06745.8 227 0.00034 13.6 0.0 1 1 6.1e-06 0.0006 12.8 0.0 16 53 155 190 148 240 0.77 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 AAA_14 PF13173.1 128 1.2e-05 19.1 0.1 1 1 4.7e-07 3.1e-05 17.8 0.0 2 96 100 200 99 210 0.70 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_14 - 504 AAA_14 PF13173.1 128 3.2e-05 17.7 1.3 1 2 7.6e-05 0.005 10.6 0.1 11 46 28 62 18 156 0.76 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 AAA_14 PF13173.1 128 3.2e-05 17.7 1.3 2 2 0.0034 0.22 5.3 0.0 51 99 176 227 127 241 0.73 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_49 - 332 AAA_14 PF13173.1 128 0.00054 13.7 0.1 1 2 0.0067 0.43 4.3 0.0 64 96 135 165 98 166 0.69 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 AAA_14 PF13173.1 128 0.00054 13.7 0.1 2 2 9.5e-05 0.0062 10.3 0.0 2 35 158 191 157 213 0.80 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 GvpD PF07088.6 484 5e-06 18.9 0.0 1 1 3.9e-08 7.6e-06 18.3 0.0 10 89 158 241 150 262 0.76 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 5_7 - 565 HI0933_like PF03486.9 409 4.3e-08 25.8 3.7 1 2 1.2e-06 0.00023 13.5 2.5 2 33 99 130 98 138 0.91 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 HI0933_like PF03486.9 409 4.3e-08 25.8 3.7 2 2 7.2e-06 0.0014 10.9 0.0 82 164 284 366 276 385 0.83 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_49 - 332 AAA_29 PF13555.1 62 0.002 11.6 0.0 1 1 2.3e-05 0.0046 10.4 0.0 19 43 157 178 145 188 0.75 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 5_7 - 565 FAD_binding_2 PF00890.19 417 8.4e-06 18.6 4.7 1 3 4.3e-08 8.4e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 FAD_binding_2 PF00890.19 417 8.4e-06 18.6 4.7 2 3 0.034 6.7 -0.8 0.1 143 204 311 369 297 388 0.72 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 FAD_binding_2 PF00890.19 417 8.4e-06 18.6 4.7 3 3 0.074 15 -1.9 0.0 376 402 388 408 377 424 0.82 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_36 - 488 AAA PF00004.24 132 4.1e-29 95.3 0.0 1 1 2.7e-30 1.8e-28 93.3 0.0 1 131 245 371 245 372 0.97 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_62 - 247 AAA PF00004.24 132 4.1e-09 30.6 0.1 1 1 1.6e-10 1.1e-08 29.3 0.0 1 109 103 200 103 207 0.73 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 4_11 - 325 AAA PF00004.24 132 3e-05 18.1 0.0 1 1 1e-06 6.6e-05 17.0 0.0 1 125 32 167 32 171 0.73 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 1_62 - 247 Bac_DnaA PF00308.13 219 1e-11 38.7 0.0 1 1 1e-13 2.1e-11 37.7 0.0 35 139 101 202 94 206 0.88 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_14 - 504 UvrD_C PF13361.1 351 1.8e-10 34.6 0.0 1 1 1.7e-12 3.4e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 4_9 - 303 KR PF08659.5 181 1.9e-13 44.3 0.0 1 1 1.3e-15 2.6e-13 43.9 0.0 3 174 60 236 59 242 0.81 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 2_5 - 372 PAPS_reduct PF01507.14 174 6.9e-12 39.4 0.4 1 2 0.014 2.8 1.6 0.0 2 17 53 68 52 91 0.76 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_5 - 372 PAPS_reduct PF01507.14 174 6.9e-12 39.4 0.4 2 2 4.4e-13 8.7e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 4_11 - 325 Sigma54_activat PF00158.21 168 4.9e-64 208.7 0.0 1 1 7.2e-66 7.1e-64 208.2 0.0 2 163 9 170 8 175 0.98 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 2_49 - 332 Sigma54_activat PF00158.21 168 1.7e-05 18.2 0.0 1 1 3.1e-07 3e-05 17.4 0.0 14 54 150 190 138 213 0.82 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 5_7 - 565 Pyr_redox_3 PF13738.1 203 2.5e-17 57.4 0.1 1 2 4.4e-14 8.7e-12 39.3 0.1 1 201 101 303 101 305 0.75 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 Pyr_redox_3 PF13738.1 203 2.5e-17 57.4 0.1 2 2 9e-07 0.00018 15.5 0.0 93 147 320 375 309 430 0.76 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_49 - 332 MMR_HSR1 PF01926.18 116 0.00085 13.2 0.0 1 1 7.1e-06 0.0014 12.5 0.0 2 41 161 205 160 310 0.84 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 5_2 - 331 TniB PF05621.6 302 4.2e-201 659.8 5.7 1 1 2.6e-203 5e-201 659.6 5.7 1 287 1 287 1 300 0.98 # 700 # 1692 # -1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 2_55 - 301 NAD_binding_11 PF14833.1 122 9.3e-38 122.9 0.3 1 2 0.029 5.7 0.9 1.1 8 53 96 141 92 153 0.85 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 2_55 - 301 NAD_binding_11 PF14833.1 122 9.3e-38 122.9 0.3 2 2 4.7e-40 9.3e-38 122.9 0.3 1 121 170 289 170 290 0.98 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 1_49 - 212 N6_Mtase PF02384.11 311 7.3e-07 22.3 0.0 1 1 5.9e-09 1.2e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 44472 # 45107 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 2_49 - 332 DUF258 PF03193.11 161 0.00022 14.3 0.0 1 1 2e-06 0.0004 13.5 0.0 29 61 151 184 129 224 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_32 - 622 TraG-D_C PF12696.2 128 5.6e-15 49.2 0.0 1 1 1e-16 1e-14 48.4 0.0 1 124 471 595 471 599 0.83 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_16 - 816 TraG-D_C PF12696.2 128 1.7e-06 21.8 0.0 1 1 4e-08 3.9e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_55 - 301 NAD_binding_2 PF03446.10 163 8.6e-41 133.3 3.7 1 1 6.4e-43 1.3e-40 132.8 3.7 2 162 5 166 4 167 0.96 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 1_52 - 262 AAA_31 PF13614.1 157 2.6e-10 34.3 0.0 1 1 2.6e-12 5.2e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_62 - 247 NTPase_1 PF03266.10 168 0.0002 15.0 0.1 1 2 0.0004 0.079 6.5 0.0 2 30 103 131 102 133 0.83 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 NTPase_1 PF03266.10 168 0.0002 15.0 0.1 2 2 0.00053 0.1 6.1 0.0 89 112 156 178 139 205 0.70 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 AAA_33 PF13671.1 143 0.00016 15.4 0.1 1 1 1e-05 0.00065 13.4 0.0 2 19 103 120 103 200 0.77 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_36 - 488 AAA_33 PF13671.1 143 0.00054 13.7 0.0 1 1 2.4e-05 0.0016 12.2 0.0 2 33 245 297 245 399 0.73 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_49 - 332 AAA_33 PF13671.1 143 0.00072 13.3 0.0 1 1 1.8e-05 0.0012 12.6 0.0 2 26 161 188 160 256 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 KTI12 PF08433.5 270 4.5e-05 16.6 0.2 1 1 5.4e-07 0.00011 15.4 0.0 4 94 103 188 102 210 0.77 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 DnaB_C PF03796.10 259 0.0073 9.0 2.5 1 2 0.0002 0.038 6.6 0.0 20 48 101 129 92 143 0.77 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 DnaB_C PF03796.10 259 0.0073 9.0 2.5 2 2 0.0048 0.94 2.1 0.1 111 144 142 175 138 188 0.79 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_55 - 301 Methyltransf_26 PF13659.1 117 0.0048 10.8 6.3 1 1 4.6e-05 0.0089 9.9 6.3 13 105 14 155 6 246 0.76 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 2_55 - 301 2-Hacid_dh_C PF02826.14 178 2.1e-06 20.9 0.1 1 1 1.9e-08 3.7e-06 20.0 0.1 36 146 4 118 2 124 0.86 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 3_14 - 504 AAA_30 PF13604.1 196 9.6e-08 25.7 0.1 1 2 2.8e-06 0.00018 15.0 0.0 19 80 20 81 11 109 0.77 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 AAA_30 PF13604.1 196 9.6e-08 25.7 0.1 2 2 0.00052 0.034 7.5 0.0 115 133 211 229 174 278 0.75 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_62 - 247 AAA_30 PF13604.1 196 0.00023 14.6 0.0 1 1 3.1e-05 0.002 11.6 0.0 18 103 100 171 82 189 0.74 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 AAA_30 PF13604.1 196 0.0003 14.3 0.1 1 2 7.1e-05 0.0046 10.4 0.1 11 51 151 190 145 197 0.80 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 AAA_30 PF13604.1 196 0.0003 14.3 0.1 2 2 0.035 2.3 1.6 0.0 121 178 204 258 191 272 0.77 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_32 - 622 FtsK_SpoIIIE PF01580.13 205 1.7e-07 24.8 0.0 1 2 5.1e-08 2.5e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 622 FtsK_SpoIIIE PF01580.13 205 1.7e-07 24.8 0.0 2 2 0.056 2.7 1.2 0.0 176 204 481 509 472 510 0.86 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_16 - 816 FtsK_SpoIIIE PF01580.13 205 1.5e-06 21.7 0.1 1 1 8.9e-08 4.4e-06 20.1 0.1 33 84 446 495 401 698 0.67 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_49 - 332 FtsK_SpoIIIE PF01580.13 205 1.7e-06 21.5 0.0 1 1 6.8e-08 3.3e-06 20.5 0.0 38 64 158 184 139 191 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_39 - 206 FtsK_SpoIIIE PF01580.13 205 0.0014 11.9 0.2 1 1 9.4e-05 0.0046 10.3 0.0 34 53 4 23 1 28 0.83 # 38525 # 39142 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 2_49 - 332 ABC_tran PF00005.22 137 3.1e-06 21.4 0.0 1 1 2.5e-08 4.9e-06 20.8 0.0 6 45 153 192 150 257 0.87 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 5_7 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 1 3 0.0039 0.77 2.4 0.0 187 220 94 125 59 130 0.79 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 2 3 3.3e-06 0.00066 12.5 0.0 132 231 218 308 202 332 0.82 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 3 3 0.057 11 -1.4 0.0 132 160 346 369 314 377 0.67 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_49 - 332 ATP-synt_ab PF00006.20 215 0.0011 12.4 0.0 1 1 8.8e-06 0.0017 11.7 0.0 16 62 159 205 151 247 0.86 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_55 - 301 UDPG_MGDP_dh_N PF03721.9 185 1.4e-05 18.4 0.2 1 2 2e-06 0.00039 13.7 0.1 2 39 6 43 5 50 0.92 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 2_55 - 301 UDPG_MGDP_dh_N PF03721.9 185 1.4e-05 18.4 0.2 2 2 0.0061 1.2 2.3 0.0 107 139 86 117 82 126 0.77 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 1_62 - 247 RuvB_N PF05496.7 234 4.3e-06 19.7 0.2 1 1 5.2e-08 1e-05 18.5 0.1 51 114 101 174 95 223 0.75 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_14 - 504 AAA_19 PF13245.1 76 3.1e-09 30.4 0.0 1 1 1.3e-10 8.2e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_62 - 247 AAA_19 PF13245.1 76 0.00019 15.0 0.2 1 1 9.2e-06 0.0006 13.4 0.0 10 46 101 132 95 136 0.77 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 AAA_19 PF13245.1 76 0.0013 12.4 0.1 1 1 4.2e-05 0.0027 11.3 0.1 5 48 153 191 149 224 0.78 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_16 - 816 AAA_10 PF12846.2 304 5.5e-59 193.9 0.2 1 1 1.9e-60 9.3e-59 193.1 0.2 1 296 451 729 451 738 0.93 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_32 - 622 AAA_10 PF12846.2 304 2.1e-18 60.6 0.2 1 1 1.1e-19 5.6e-18 59.2 0.2 2 299 173 549 172 553 0.71 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_62 - 247 AAA_10 PF12846.2 304 0.00023 14.5 0.0 1 1 6.9e-06 0.00034 13.9 0.0 2 33 101 132 100 195 0.92 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 AAA_10 PF12846.2 304 0.00052 13.3 0.0 1 1 1.6e-05 0.0008 12.7 0.0 3 29 160 185 158 233 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 4_9 - 303 adh_short_C2 PF13561.1 241 5.1e-30 98.8 0.0 1 1 3e-32 5.9e-30 98.6 0.0 5 239 66 298 63 300 0.95 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 5_7 - 565 FAD_oxidored PF12831.2 428 5.7e-06 19.4 3.6 1 1 2.9e-08 5.7e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 DAO PF01266.19 358 8.3e-09 28.6 11.7 1 3 1.4e-08 2.7e-06 20.3 0.7 1 38 99 134 99 190 0.84 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 DAO PF01266.19 358 8.3e-09 28.6 11.7 2 3 0.032 6.2 -0.6 0.1 3 31 273 301 271 307 0.75 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 DAO PF01266.19 358 8.3e-09 28.6 11.7 3 3 9.4e-07 0.00018 14.3 0.5 152 208 314 372 307 433 0.74 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 3_14 - 504 ResIII PF04851.10 184 2.1e-06 21.5 0.0 1 1 1.1e-07 5.4e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_49 - 332 ResIII PF04851.10 184 1.2e-05 19.0 0.0 1 1 3.9e-07 1.9e-05 18.4 0.0 22 61 148 196 104 202 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 ResIII PF04851.10 184 0.00011 15.9 0.2 1 1 8.2e-06 0.0004 14.1 0.1 22 55 80 133 43 163 0.69 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_32 - 622 ResIII PF04851.10 184 0.00021 15.0 0.0 1 1 8.5e-06 0.00042 14.0 0.0 23 57 170 206 129 214 0.74 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 3_16 - 347 DUF3584 PF12128.3 1201 0.032 5.3 51.1 1 2 0.0051 1 0.4 32.3 377 534 86 242 42 246 0.65 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 DUF3584 PF12128.3 1201 0.032 5.3 51.1 2 2 2e-05 0.0039 8.3 20.6 613 709 225 327 220 345 0.80 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_14 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 1 3 1.4e-05 0.0028 11.0 0.0 2 49 23 73 22 87 0.67 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 2 3 1.8e-05 0.0036 10.7 0.0 56 105 188 234 146 256 0.78 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 3 3 5.2e-05 0.01 9.2 0.0 176 227 404 462 344 467 0.75 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_49 - 332 DUF2075 PF09848.4 352 0.00018 14.4 0.0 1 1 1.3e-06 0.00025 13.9 0.0 1 32 158 187 158 216 0.76 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 5_7 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 1 3 0.0081 1.6 2.3 0.1 1 41 101 135 101 162 0.81 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 2 3 0.034 6.6 0.3 0.0 134 155 218 241 202 242 0.72 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 3 3 6.6e-06 0.0013 12.4 0.1 112 155 321 366 311 367 0.85 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_9 - 303 Epimerase PF01370.16 236 2.8e-06 20.8 0.0 1 1 1.9e-08 3.7e-06 20.4 0.0 1 157 60 224 60 238 0.80 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 2_49 - 332 DEAD PF00270.24 169 5.8e-06 19.7 0.0 1 1 1.1e-07 1.1e-05 18.8 0.0 13 70 157 211 144 242 0.78 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_32 - 622 DEAD PF00270.24 169 4.5e-05 16.8 0.0 1 1 8.7e-07 8.6e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_36 - 488 DUF815 PF05673.8 250 3.1e-06 20.1 0.0 1 1 5e-08 9.8e-06 18.5 0.0 19 154 208 353 194 365 0.75 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 5_7 - 565 Pyr_redox PF00070.22 80 7.1e-20 65.1 6.0 1 2 1.4e-06 0.00028 15.2 1.5 1 31 99 129 99 131 0.96 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 Pyr_redox PF00070.22 80 7.1e-20 65.1 6.0 2 2 6.2e-18 1.2e-15 51.6 0.2 1 74 271 345 271 354 0.90 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_32 - 622 DUF853 PF05872.7 504 1.7e-06 20.5 0.0 1 1 1.4e-08 2.7e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 622 TrwB_AAD_bind PF10412.4 386 3.9e-19 62.3 0.0 1 2 1.3e-12 8.7e-11 34.8 0.0 10 54 167 211 161 314 0.70 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 622 TrwB_AAD_bind PF10412.4 386 3.9e-19 62.3 0.0 2 2 1e-09 6.8e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_16 - 816 TrwB_AAD_bind PF10412.4 386 4.4e-08 25.9 0.0 1 2 2.2e-05 0.0014 11.1 0.0 6 72 442 517 438 520 0.85 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_16 - 816 TrwB_AAD_bind PF10412.4 386 4.4e-08 25.9 0.0 2 2 8.4e-06 0.00055 12.4 0.1 232 301 643 712 613 731 0.66 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_49 - 332 TrwB_AAD_bind PF10412.4 386 2.7e-05 16.8 0.1 1 1 6.4e-07 4.2e-05 16.1 0.1 14 49 157 191 150 202 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 3_14 - 504 AAA_11 PF13086.1 236 5.7e-07 23.2 0.1 1 1 3.8e-08 3.7e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_62 - 247 AAA_11 PF13086.1 236 0.002 11.6 0.3 1 2 0.00032 0.032 7.6 0.0 14 41 97 124 48 148 0.83 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 AAA_11 PF13086.1 236 0.002 11.6 0.3 2 2 0.029 2.8 1.2 0.0 184 200 154 169 145 173 0.84 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_16 - 816 Guanylate_kin PF00625.16 183 0.00029 14.2 0.1 1 3 0.0039 0.76 3.0 0.0 3 26 452 475 450 503 0.86 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_16 - 816 Guanylate_kin PF00625.16 183 0.00029 14.2 0.1 2 3 0.0094 1.8 1.8 0.1 75 115 596 637 580 703 0.83 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_16 - 816 Guanylate_kin PF00625.16 183 0.00029 14.2 0.1 3 3 0.001 0.2 4.9 0.0 75 131 714 770 697 777 0.87 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 4_11 - 325 Sigma54_activ_2 PF14532.1 138 1.2e-24 80.8 0.0 1 1 6.5e-26 4.3e-24 79.0 0.0 1 138 9 179 9 179 0.90 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 2_49 - 332 Sigma54_activ_2 PF14532.1 138 4.7e-06 20.6 0.0 1 1 1.5e-07 9.9e-06 19.5 0.0 14 65 151 202 145 212 0.92 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 Sigma54_activ_2 PF14532.1 138 0.0022 11.9 1.9 1 3 0.022 1.5 2.8 0.2 85 121 19 55 15 57 0.89 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 Sigma54_activ_2 PF14532.1 138 0.0022 11.9 1.9 2 3 0.013 0.86 3.5 0.0 20 38 99 117 85 126 0.85 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 Sigma54_activ_2 PF14532.1 138 0.0022 11.9 1.9 3 3 0.014 0.93 3.4 0.0 98 132 126 160 120 164 0.89 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_32 - 622 T4SS-DNA_transf PF02534.9 469 4.8e-05 15.9 0.0 1 2 5.2e-07 0.0001 14.8 0.0 37 115 168 249 125 365 0.73 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 622 T4SS-DNA_transf PF02534.9 469 4.8e-05 15.9 0.0 2 2 0.097 19 -2.6 0.0 328 389 494 555 474 572 0.74 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 5_2 - 331 AAA_32 PF13654.1 509 0.00019 14.0 0.0 1 2 8.6e-06 0.0017 10.9 0.0 8 81 34 112 26 124 0.86 # 700 # 1692 # -1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 5_2 - 331 AAA_32 PF13654.1 509 0.00019 14.0 0.0 2 2 0.01 2 0.8 0.0 472 504 255 287 242 290 0.90 # 700 # 1692 # -1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 1_32 - 622 ArgK PF03308.11 267 0.00021 13.9 0.0 1 1 1.8e-06 0.00036 13.2 0.0 12 68 158 209 153 214 0.88 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_49 - 332 Pox_A32 PF04665.7 241 0.0002 14.6 0.0 1 1 1.7e-06 0.00033 13.8 0.0 12 46 157 191 150 210 0.85 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_5 - 372 tRNA_Me_trans PF03054.11 356 7.4e-05 15.2 0.0 1 2 1.1e-06 0.00022 13.6 0.0 2 71 52 122 51 144 0.74 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_5 - 372 tRNA_Me_trans PF03054.11 356 7.4e-05 15.2 0.0 2 2 0.042 8.1 -1.4 0.0 193 224 274 305 236 311 0.83 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_49 - 332 GTP_EFTU PF00009.22 188 0.00043 13.6 0.2 1 1 3.5e-06 0.00068 12.9 0.2 2 32 157 187 156 205 0.83 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 RNA_helicase PF00910.17 107 3.9e-05 17.7 0.1 1 2 3.5e-06 0.00068 13.7 0.0 1 25 161 185 161 242 0.75 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 RNA_helicase PF00910.17 107 3.9e-05 17.7 0.1 2 2 0.027 5.3 1.2 0.1 69 100 290 322 281 328 0.78 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 UPF0079 PF02367.12 123 1.2e-05 18.8 0.0 1 1 1.2e-07 2.4e-05 17.8 0.0 9 45 152 188 145 193 0.85 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_55 - 301 TrkA_N PF02254.13 116 6.6e-05 16.8 0.0 1 1 8e-07 0.00016 15.6 0.0 1 42 7 48 7 79 0.86 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 5_7 - 565 AlaDh_PNT_C PF01262.16 168 4.7e-05 16.9 3.1 1 2 0.001 0.1 6.0 0.8 15 50 92 127 89 130 0.90 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 AlaDh_PNT_C PF01262.16 168 4.7e-05 16.9 3.1 2 2 4.2e-05 0.0041 10.5 0.1 16 58 265 307 257 339 0.84 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_55 - 301 AlaDh_PNT_C PF01262.16 168 0.00026 14.5 1.6 1 2 8.4e-06 0.00082 12.8 0.1 21 66 5 50 2 62 0.90 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 2_55 - 301 AlaDh_PNT_C PF01262.16 168 0.00026 14.5 1.6 2 2 0.056 5.5 0.4 0.2 13 42 84 113 72 117 0.84 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 1_62 - 247 AAA_24 PF13479.1 213 0.00059 13.3 0.0 1 1 4.6e-06 0.0009 12.7 0.0 5 77 102 170 98 176 0.77 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 Myosin_head PF00063.16 689 0.00031 12.7 0.0 1 1 2.2e-06 0.00044 12.2 0.0 84 110 157 183 147 209 0.90 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 4_5 - 131 BOF PF04076.8 103 1.2e-33 109.0 0.0 1 1 7.4e-36 1.4e-33 108.7 0.0 4 103 30 130 26 130 0.97 # 5631 # 6023 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.466 3_14 - 504 UvrD-helicase PF00580.16 315 1.1e-16 54.9 3.9 1 2 2.9e-06 0.00057 13.1 0.1 2 38 8 44 7 64 0.81 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 UvrD-helicase PF00580.16 315 1.1e-16 54.9 3.9 2 2 3.4e-15 6.6e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_49 - 332 NACHT PF05729.7 166 0.00017 15.1 0.0 1 1 3.8e-06 0.00038 14.0 0.0 1 27 159 185 159 188 0.90 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 NACHT PF05729.7 166 0.0014 12.1 1.5 1 1 9.4e-05 0.0092 9.5 0.4 3 24 103 124 101 205 0.90 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 AAA_25 PF13481.1 194 6.3e-06 19.5 0.0 1 2 3.2e-06 0.00012 15.3 0.0 24 58 90 125 76 135 0.82 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 AAA_25 PF13481.1 194 6.3e-06 19.5 0.0 2 2 0.052 2.1 1.6 0.0 131 151 150 170 122 173 0.78 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_36 - 488 AAA_25 PF13481.1 194 0.00012 15.3 3.6 1 3 0.061 2.4 1.3 1.4 36 55 245 264 224 275 0.81 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_36 - 488 AAA_25 PF13481.1 194 0.00012 15.3 3.6 2 3 0.00018 0.0069 9.6 0.0 127 176 287 336 270 348 0.69 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_36 - 488 AAA_25 PF13481.1 194 0.00012 15.3 3.6 3 3 0.021 0.82 2.9 0.0 69 172 337 440 325 448 0.66 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_16 - 816 AAA_25 PF13481.1 194 0.00067 12.9 0.0 1 1 4.2e-05 0.0017 11.6 0.0 36 86 454 494 447 532 0.82 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_52 - 262 AAA_25 PF13481.1 194 0.00077 12.7 0.0 1 1 3e-05 0.0012 12.1 0.0 42 91 12 51 11 134 0.78 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_32 - 622 AAA_25 PF13481.1 194 0.00077 12.7 0.0 1 1 6.1e-05 0.0024 11.1 0.0 20 137 159 265 145 272 0.78 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_62 - 247 AAA_28 PF13521.1 163 0.00028 14.7 1.2 1 2 0.089 17 -0.9 0.2 51 70 36 55 8 70 0.60 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 AAA_28 PF13521.1 163 0.00028 14.7 1.2 2 2 3.1e-06 0.0006 13.6 0.0 2 48 103 154 102 216 0.84 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 4_11 - 325 AAA_5 PF07728.9 139 4.5e-09 30.0 0.0 1 1 7.7e-11 7.5e-09 29.3 0.0 1 123 31 150 31 169 0.81 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 1_62 - 247 AAA_5 PF07728.9 139 0.00099 12.7 1.0 1 1 1.6e-05 0.0015 12.1 0.1 1 16 102 117 102 235 0.94 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/c44e05d6-2676-465a-bebe-905d0ac6c1f4 # Target file: checkm_output/bins/pm1622/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1622/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c44e05d6-2676-465a-bebe-905d0ac6c1f4 checkm_output/bins/pm1622/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:58:49 2020 # [ok]