# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_33 - 488 Mg_chelatase PF01078.16 207 0.0011 11.9 0.1 1 1 2.3e-05 0.0023 11.0 0.1 1 47 215 267 215 281 0.79 # 19328 # 20791 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 3_7 - 140 Mg_chelatase PF01078.16 207 0.0012 11.9 0.0 1 1 1.7e-05 0.0017 11.4 0.0 24 53 63 92 60 108 0.86 # 6009 # 6428 # -1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_3 - 372 ATP_bind_3 PF01171.15 182 0.00035 14.0 0.0 1 2 6.3e-05 0.012 8.9 0.0 1 59 52 110 52 123 0.78 # 2568 # 3683 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_3 - 372 ATP_bind_3 PF01171.15 182 0.00035 14.0 0.0 2 2 0.005 0.99 2.7 0.0 134 161 232 260 207 262 0.72 # 2568 # 3683 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 3_2 - 181 cobW PF02492.14 178 0.0017 11.7 0.0 1 1 1.3e-05 0.0026 11.1 0.0 2 22 2 22 1 30 0.79 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_33 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 1 5 0.019 3.7 1.5 8.8 39 98 89 152 77 158 0.72 # 34636 # 35676 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_33 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 2 5 0.00084 0.17 5.9 3.1 50 100 146 196 143 199 0.89 # 34636 # 35676 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_33 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 3 5 2.6e-06 0.00051 13.9 12.2 19 100 216 294 201 297 0.85 # 34636 # 35676 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_33 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 4 5 0.00031 0.06 7.3 2.1 62 105 284 327 282 330 0.90 # 34636 # 35676 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_33 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 5 5 0.0059 1.2 3.1 1.6 82 105 304 327 296 345 0.51 # 34636 # 35676 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 1_50 - 262 MipZ PF09140.6 261 3.5e-10 33.2 0.0 1 2 6.6e-10 1.3e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 29399 # 30184 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_50 - 262 MipZ PF09140.6 261 3.5e-10 33.2 0.0 2 2 0.00031 0.062 6.2 0.0 89 122 117 150 89 166 0.74 # 29399 # 30184 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_105 - 176 SSB PF00436.20 104 2.4e-41 133.7 0.3 1 1 1.5e-43 3e-41 133.4 0.3 1 104 5 109 5 109 0.99 # 80156 # 80683 # 1 # ID=1_105;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_23 - 545 Methyltransf_18 PF12847.2 112 2e-05 19.0 0.0 1 1 4.9e-07 4.8e-05 17.8 0.0 4 79 235 324 233 375 0.82 # 26459 # 28093 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.550 1_134 - 282 Methyltransf_18 PF12847.2 112 2.1e-05 19.0 0.0 1 1 3.8e-07 3.7e-05 18.2 0.0 5 87 132 211 129 230 0.74 # 104853 # 105698 # -1 # ID=1_134;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.410 2_35 - 504 UvrD_C_2 PF13538.1 104 1.5e-10 35.0 0.0 1 1 3.5e-12 6.9e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_33 - 488 AAA_2 PF07724.9 171 7e-06 19.9 0.0 1 1 1.9e-07 3.8e-05 17.5 0.0 6 92 245 325 240 333 0.90 # 19328 # 20791 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_71 - 622 DUF87 PF01935.12 229 1.7e-08 28.4 0.0 1 1 4.3e-10 4.2e-08 27.1 0.0 24 63 173 211 168 269 0.87 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_92 - 816 DUF87 PF01935.12 229 7.3e-08 26.3 0.2 1 1 1.5e-09 1.5e-07 25.3 0.2 24 154 452 587 432 660 0.71 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_15 - 483 AAA_22 PF13401.1 131 1.1e-21 71.2 0.0 1 1 7.3e-23 2.1e-21 70.3 0.0 7 131 126 270 120 270 0.89 # 13966 # 15414 # 1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.482 3_7 - 140 AAA_22 PF13401.1 131 1.1e-07 25.9 0.0 1 1 6e-09 1.7e-07 25.3 0.0 7 68 64 126 58 136 0.92 # 6009 # 6428 # -1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 3_2 - 181 AAA_22 PF13401.1 131 3.3e-05 17.9 0.0 1 1 2.3e-06 6.5e-05 17.0 0.0 6 37 2 34 1 177 0.84 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_35 - 504 AAA_22 PF13401.1 131 6.4e-05 17.0 0.0 1 2 0.00019 0.0053 10.8 0.0 8 68 23 92 17 122 0.63 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_35 - 504 AAA_22 PF13401.1 131 6.4e-05 17.0 0.0 2 2 0.035 0.98 3.4 0.0 82 124 189 225 164 229 0.77 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_103 - 323 AAA_22 PF13401.1 131 0.00024 15.1 0.0 1 1 1.8e-05 0.00051 14.1 0.0 5 54 62 103 56 164 0.76 # 78205 # 79173 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_71 - 622 AAA_22 PF13401.1 131 0.00025 15.1 0.0 1 1 2.9e-05 0.00082 13.4 0.0 3 68 171 231 166 287 0.83 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_33 - 488 AAA_22 PF13401.1 131 0.0012 12.9 1.0 1 1 0.0026 0.072 7.1 0.8 69 114 283 337 243 354 0.65 # 19328 # 20791 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_61 - 476 DNA_methylase PF00145.12 335 1.2e-10 34.9 0.0 1 2 4.1e-11 4e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 35569 # 36996 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_61 - 476 DNA_methylase PF00145.12 335 1.2e-10 34.9 0.0 2 2 0.0061 0.6 2.9 0.0 290 330 407 448 341 452 0.73 # 35569 # 36996 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_132 - 265 DNA_methylase PF00145.12 335 2.4e-09 30.6 0.0 1 1 2.9e-11 2.9e-09 30.3 0.0 284 333 196 251 154 253 0.85 # 102965 # 103759 # 1 # ID=1_132;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.681 1_65 - 93 Ribosomal_L2_C PF03947.13 130 0.00098 12.8 0.0 1 1 6.3e-06 0.0012 12.5 0.0 74 111 44 80 24 82 0.86 # 38558 # 38836 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.441 1_103 - 323 AAA_3 PF07726.6 131 0.00014 15.4 0.0 1 1 1.1e-06 0.00022 14.7 0.0 3 114 65 188 63 212 0.80 # 78205 # 79173 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_19 - 880 AAA_15 PF13175.1 415 1.8e-05 17.7 0.0 1 2 1e-05 0.002 11.0 0.0 18 43 289 318 259 356 0.84 # 20292 # 22931 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.572 2_19 - 880 AAA_15 PF13175.1 415 1.8e-05 17.7 0.0 2 2 0.001 0.2 4.5 0.0 354 412 766 817 601 819 0.83 # 20292 # 22931 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.572 1_47 - 415 N6_N4_Mtase PF01555.13 231 1e-24 81.1 0.0 1 1 9.2e-27 1.8e-24 80.3 0.0 1 228 129 389 129 392 0.81 # 27225 # 28469 # 1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.533 3_2 - 181 AAA_17 PF13207.1 121 1.2e-06 23.2 0.1 1 1 3.5e-08 2.3e-06 22.3 0.1 1 77 2 94 2 173 0.54 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_103 - 323 AAA_17 PF13207.1 121 5e-05 18.0 0.0 1 1 1.7e-06 0.00011 16.9 0.0 3 27 65 89 64 166 0.90 # 78205 # 79173 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_33 - 488 AAA_17 PF13207.1 121 0.00022 15.9 0.0 1 1 1.8e-05 0.0012 13.6 0.0 2 64 245 300 245 384 0.62 # 19328 # 20791 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_19 - 880 AAA_21 PF13304.1 303 5.5e-12 40.0 0.1 1 2 0.0003 0.06 7.1 0.0 9 25 303 321 295 368 0.75 # 20292 # 22931 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.572 2_19 - 880 AAA_21 PF13304.1 303 5.5e-12 40.0 0.1 2 2 2.2e-11 4.2e-09 30.6 0.0 182 301 677 819 622 821 0.78 # 20292 # 22931 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.572 2_15 - 483 Miro PF08477.8 119 0.00064 14.1 0.0 1 1 1.6e-05 0.0031 11.9 0.1 2 37 126 160 125 172 0.72 # 13966 # 15414 # 1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.482 1_71 - 622 MobB PF03205.9 140 0.001 12.6 0.0 1 1 1.7e-05 0.0034 10.9 0.0 4 34 176 206 175 214 0.90 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_20 - 388 AAA_4 PF04326.9 122 3.1e-21 69.7 0.0 1 1 2.6e-23 5.2e-21 68.9 0.0 1 121 14 127 14 128 0.95 # 22913 # 24076 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_50 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.5 0.0 1 2 3e-07 6e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 29399 # 30184 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_50 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.5 0.0 2 2 0.029 5.7 -0.3 0.0 124 136 124 136 106 143 0.79 # 29399 # 30184 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 2_35 - 504 PhoH PF02562.11 205 5e-06 19.7 0.2 1 2 0.0013 0.26 4.3 0.0 22 45 22 45 4 61 0.78 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_35 - 504 PhoH PF02562.11 205 5e-06 19.7 0.2 2 2 7.5e-06 0.0015 11.7 0.0 122 168 196 240 193 255 0.83 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_103 - 323 T2SE PF00437.15 272 6.9e-05 15.7 0.0 1 1 1.6e-06 0.00016 14.5 0.0 105 148 40 81 9 100 0.77 # 78205 # 79173 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_71 - 622 T2SE PF00437.15 272 0.00036 13.3 0.0 1 1 5.9e-06 0.00058 12.6 0.0 116 162 163 206 124 227 0.78 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 3_7 - 140 G-alpha PF00503.15 389 0.0016 11.0 0.0 1 1 9.6e-06 0.0019 10.7 0.0 54 91 57 93 41 106 0.84 # 6009 # 6428 # -1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 3_2 - 181 Cytidylate_kin2 PF13189.1 179 0.00091 13.0 0.0 1 2 6.6e-05 0.013 9.3 0.0 1 23 2 24 2 46 0.78 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_2 - 181 Cytidylate_kin2 PF13189.1 179 0.00091 13.0 0.0 2 2 0.015 2.9 1.6 0.0 112 135 99 122 91 136 0.77 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_2 - 181 Zeta_toxin PF06414.7 201 8.9e-05 15.5 0.0 1 2 9.4e-06 0.00092 12.2 0.0 19 53 3 35 1 120 0.83 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_2 - 181 Zeta_toxin PF06414.7 201 8.9e-05 15.5 0.0 2 2 0.048 4.7 0.1 0.0 45 74 106 133 95 150 0.73 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_33 - 488 Zeta_toxin PF06414.7 201 0.00033 13.6 0.0 1 1 6.3e-06 0.00062 12.7 0.0 18 52 244 277 239 316 0.90 # 19328 # 20791 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_19 - 880 SMC_N PF02463.14 220 1.2e-11 38.1 0.9 1 1 3.4e-12 3.3e-10 33.4 0.9 19 201 288 819 284 839 0.93 # 20292 # 22931 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.572 2_22 - 372 SMC_N PF02463.14 220 0.00051 13.2 0.0 1 1 1e-05 0.001 12.2 0.0 128 203 132 220 37 233 0.79 # 25347 # 26462 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.531 1_3 - 372 TIGR02432 TIGR02432 189 8.2e-05 16.1 0.1 1 2 1.1e-05 0.0022 11.5 0.0 1 58 52 109 52 118 0.85 # 2568 # 3683 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_3 - 372 TIGR02432 TIGR02432 189 8.2e-05 16.1 0.1 2 2 0.0084 1.7 2.1 0.0 140 165 235 260 207 262 0.76 # 2568 # 3683 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 2_15 - 483 Arch_ATPase PF01637.13 234 2.5e-05 17.9 0.0 1 1 5e-07 4.9e-05 16.9 0.0 24 150 127 253 123 264 0.77 # 13966 # 15414 # 1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.482 1_103 - 323 Arch_ATPase PF01637.13 234 8.3e-05 16.2 0.0 1 1 1.4e-06 0.00014 15.5 0.0 4 44 45 85 43 94 0.91 # 78205 # 79173 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_15 - 483 AAA_16 PF13191.1 185 3.2e-05 17.8 0.1 1 1 7.9e-06 0.00026 14.9 0.0 24 88 123 196 117 261 0.67 # 13966 # 15414 # 1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.482 1_103 - 323 AAA_16 PF13191.1 185 4.7e-05 17.3 0.8 1 1 4.4e-06 0.00014 15.7 0.0 7 48 47 85 42 102 0.79 # 78205 # 79173 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_92 - 816 AAA_16 PF13191.1 185 5.4e-05 17.1 0.2 1 1 9.5e-06 0.00031 14.6 0.2 20 63 447 490 439 659 0.64 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_63 - 206 AAA_16 PF13191.1 185 8.3e-05 16.5 0.1 1 1 3.8e-06 0.00012 15.9 0.1 27 68 11 54 3 168 0.79 # 37708 # 38325 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.519 3_7 - 140 AAA_16 PF13191.1 185 0.00032 14.6 0.0 1 1 1.7e-05 0.00055 13.8 0.0 8 52 45 91 41 129 0.77 # 6009 # 6428 # -1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 2_19 - 880 AAA_16 PF13191.1 185 0.073 6.9 9.0 1 1 0.00084 0.028 8.3 0.0 24 47 293 316 287 365 0.87 # 20292 # 22931 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.572 2_19 - 880 AAA_23 PF13476.1 202 3.1e-09 31.3 13.2 1 1 2.2e-10 4.4e-08 27.5 13.2 10 200 284 589 277 660 0.66 # 20292 # 22931 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.572 3_2 - 181 AAA_18 PF13238.1 129 1.3e-10 35.5 0.0 1 1 1.2e-12 2.4e-10 34.7 0.0 1 126 3 134 3 137 0.71 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_22 - 372 AAA_13 PF13166.1 712 8.2e-23 74.5 2.5 1 2 2.4e-05 0.0024 10.2 0.1 16 58 24 72 18 106 0.69 # 25347 # 26462 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.531 2_22 - 372 AAA_13 PF13166.1 712 8.2e-23 74.5 2.5 2 2 8.3e-22 8.2e-20 64.6 0.4 466 711 104 345 96 346 0.76 # 25347 # 26462 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.531 2_33 - 347 AAA_13 PF13166.1 712 0.013 7.7 36.6 1 2 0.0038 0.37 2.9 28.3 283 457 85 259 71 272 0.58 # 34636 # 35676 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_33 - 347 AAA_13 PF13166.1 712 0.013 7.7 36.6 2 2 4.7e-05 0.0046 9.2 23.2 287 474 160 339 154 345 0.78 # 34636 # 35676 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 1_50 - 262 CbiA PF01656.18 195 2.2e-30 99.3 0.0 1 1 2.9e-32 2.9e-30 99.0 0.0 1 170 5 205 5 229 0.77 # 29399 # 30184 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_92 - 816 CbiA PF01656.18 195 0.00078 12.7 0.0 1 1 1.7e-05 0.0016 11.7 0.0 3 49 455 517 454 593 0.60 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_35 - 504 AAA_14 PF13173.1 128 3.2e-05 17.7 1.3 1 2 5.1e-05 0.005 10.6 0.1 11 46 28 62 18 156 0.76 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_35 - 504 AAA_14 PF13173.1 128 3.2e-05 17.7 1.3 2 2 0.0023 0.22 5.3 0.0 51 99 176 227 127 241 0.73 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_2 - 181 AAA_14 PF13173.1 128 0.0012 12.7 0.0 1 1 2.3e-05 0.0023 11.7 0.0 4 27 2 25 1 54 0.79 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_19 - 880 AAA_29 PF13555.1 62 3.3e-06 20.5 0.0 1 1 1.9e-07 1.9e-05 18.1 0.0 10 50 282 321 279 329 0.85 # 20292 # 22931 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.572 1_103 - 323 AAA_29 PF13555.1 62 0.0024 11.3 1.0 1 1 5.4e-05 0.0053 10.2 0.3 21 38 59 76 54 79 0.86 # 78205 # 79173 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_33 - 488 AAA PF00004.24 132 6.9e-29 94.6 0.0 1 1 3e-30 3e-28 92.5 0.0 1 131 245 371 245 372 0.96 # 19328 # 20791 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_103 - 323 AAA PF00004.24 132 0.00067 13.7 0.1 1 1 1.5e-05 0.0015 12.6 0.1 2 33 65 96 64 149 0.83 # 78205 # 79173 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_35 - 504 UvrD_C PF13361.1 351 1.8e-10 34.6 0.0 1 1 1.7e-12 3.4e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_3 - 372 PAPS_reduct PF01507.14 174 7e-12 39.4 0.4 1 2 0.014 2.8 1.6 0.0 2 17 53 68 52 91 0.76 # 2568 # 3683 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_3 - 372 PAPS_reduct PF01507.14 174 7e-12 39.4 0.4 2 2 4.4e-13 8.7e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 2568 # 3683 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 3_7 - 140 TniB PF05621.6 302 1.5e-91 300.2 1.3 1 1 8.3e-94 1.6e-91 300.0 1.3 1 131 1 131 1 138 0.98 # 6009 # 6428 # -1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 2_23 - 545 N6_Mtase PF02384.11 311 7.9e-102 334.3 0.0 1 1 1.1e-103 1.1e-101 333.9 0.0 2 310 178 506 177 507 0.93 # 26459 # 28093 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.550 1_53 - 212 N6_Mtase PF02384.11 311 7.3e-07 22.3 0.0 1 1 1.2e-08 1.2e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 31743 # 32378 # -1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.519 1_71 - 622 TraG-D_C PF12696.2 128 5.6e-15 49.2 0.0 1 1 1e-16 1e-14 48.4 0.0 1 124 471 595 471 599 0.83 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_92 - 816 TraG-D_C PF12696.2 128 1.8e-06 21.8 0.0 1 1 4e-08 3.9e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_50 - 262 AAA_31 PF13614.1 157 2.6e-10 34.3 0.0 1 1 2.6e-12 5.2e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 29399 # 30184 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 3_2 - 181 AAA_33 PF13671.1 143 1.1e-10 35.4 0.0 1 1 2.2e-12 1.4e-10 35.0 0.0 2 127 3 130 2 151 0.75 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_33 - 488 AAA_33 PF13671.1 143 0.00064 13.5 0.0 1 1 2.8e-05 0.0018 12.0 0.0 2 53 245 295 245 396 0.76 # 19328 # 20791 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_105 - 176 AAA_33 PF13671.1 143 0.0011 12.7 0.0 1 1 2.6e-05 0.0017 12.1 0.0 26 102 33 104 23 109 0.75 # 80156 # 80683 # 1 # ID=1_105;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_23 - 545 Methyltransf_26 PF13659.1 117 4.4e-15 49.6 0.0 1 1 9.3e-17 9.2e-15 48.6 0.0 2 116 234 374 233 375 0.79 # 26459 # 28093 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.550 1_47 - 415 Methyltransf_26 PF13659.1 117 0.00011 16.1 0.0 1 2 1.2e-05 0.0012 12.8 0.0 68 116 126 180 46 181 0.82 # 27225 # 28469 # 1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_47 - 415 Methyltransf_26 PF13659.1 117 0.00011 16.1 0.0 2 2 0.076 7.5 0.5 0.0 1 31 352 381 352 397 0.71 # 27225 # 28469 # 1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_134 - 282 FmrO PF07091.6 251 8e-85 277.6 0.0 1 1 4.6e-87 9.1e-85 277.4 0.0 2 251 18 277 17 277 0.98 # 104853 # 105698 # -1 # ID=1_134;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.410 2_35 - 504 AAA_30 PF13604.1 196 9.6e-08 25.7 0.1 1 2 9.2e-07 0.00018 15.0 0.0 19 80 20 81 11 109 0.77 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_35 - 504 AAA_30 PF13604.1 196 9.6e-08 25.7 0.1 2 2 0.00017 0.034 7.5 0.0 115 133 211 229 174 278 0.75 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_71 - 622 FtsK_SpoIIIE PF01580.13 205 1.7e-07 24.8 0.0 1 2 3.8e-08 2.5e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_71 - 622 FtsK_SpoIIIE PF01580.13 205 1.7e-07 24.8 0.0 2 2 0.042 2.7 1.2 0.0 176 204 481 509 472 510 0.86 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_92 - 816 FtsK_SpoIIIE PF01580.13 205 1.5e-06 21.7 0.1 1 1 6.7e-08 4.4e-06 20.1 0.1 33 84 446 495 401 698 0.67 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_63 - 206 FtsK_SpoIIIE PF01580.13 205 0.0014 11.9 0.2 1 1 7.1e-05 0.0046 10.3 0.0 34 53 4 23 1 28 0.83 # 37708 # 38325 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.519 2_23 - 545 MTS PF05175.9 170 3.6e-06 20.3 0.0 1 1 4.3e-08 8.4e-06 19.1 0.0 33 139 234 372 223 377 0.72 # 26459 # 28093 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.550 1_103 - 323 ABC_tran PF00005.22 137 0.0014 12.8 0.0 1 1 2.7e-05 0.0027 11.9 0.0 11 46 61 96 55 117 0.85 # 78205 # 79173 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_19 - 880 ABC_tran PF00005.22 137 0.042 8.0 6.0 1 2 0.00055 0.055 7.6 0.1 14 42 296 324 288 482 0.83 # 20292 # 22931 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.572 2_19 - 880 ABC_tran PF00005.22 137 0.042 8.0 6.0 2 2 0.093 9.2 0.4 0.0 99 135 744 784 654 786 0.60 # 20292 # 22931 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.572 3_2 - 181 TIGR03263 TIGR03263 180 0.0014 11.8 0.0 1 1 1.6e-05 0.0032 10.7 0.0 3 26 2 25 1 31 0.81 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_23 - 545 Eco57I PF07669.6 106 1.7e-06 22.2 0.0 1 1 2.3e-08 4.5e-06 20.9 0.0 2 103 314 423 312 426 0.84 # 26459 # 28093 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.550 2_35 - 504 AAA_19 PF13245.1 76 3.1e-09 30.4 0.0 1 1 1.3e-10 8.3e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_103 - 323 AAA_19 PF13245.1 76 0.0003 14.4 0.1 1 1 1.1e-05 0.00069 13.3 0.1 10 35 61 86 51 112 0.76 # 78205 # 79173 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 3_2 - 181 AAA_19 PF13245.1 76 0.00046 13.8 0.0 1 1 2.5e-05 0.0016 12.1 0.0 15 33 5 22 2 38 0.84 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_92 - 816 AAA_10 PF12846.2 304 5.6e-59 193.9 0.2 1 1 9.5e-61 9.3e-59 193.1 0.2 1 296 451 729 451 738 0.93 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_71 - 622 AAA_10 PF12846.2 304 2.1e-18 60.6 0.2 1 1 5.7e-20 5.6e-18 59.2 0.2 2 299 173 549 172 553 0.71 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_18 - 990 ResIII PF04851.10 184 4.5e-39 128.0 0.4 1 1 3.9e-40 2.6e-38 125.6 0.0 3 183 247 415 245 416 0.92 # 17323 # 20292 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_35 - 504 ResIII PF04851.10 184 2.1e-06 21.5 0.0 1 1 8.3e-08 5.4e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_71 - 622 ResIII PF04851.10 184 0.00021 15.0 0.0 1 1 6.4e-06 0.00042 14.0 0.0 23 57 170 206 129 214 0.74 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_134 - 282 Methyltransf_31 PF13847.1 152 1.2e-05 18.8 0.0 1 2 0.095 9.3 -0.3 0.0 91 145 6 74 1 80 0.56 # 104853 # 105698 # -1 # ID=1_134;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.410 1_134 - 282 Methyltransf_31 PF13847.1 152 1.2e-05 18.8 0.0 2 2 6.3e-07 6.2e-05 16.5 0.0 6 83 131 206 127 239 0.84 # 104853 # 105698 # -1 # ID=1_134;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.410 2_23 - 545 Methyltransf_31 PF13847.1 152 6.3e-05 16.5 0.0 1 1 1.5e-06 0.00014 15.3 0.0 6 81 235 332 231 408 0.69 # 26459 # 28093 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.550 2_33 - 347 DUF3584 PF12128.3 1201 0.033 5.3 51.1 1 2 0.0051 1 0.4 32.3 377 534 86 242 42 246 0.65 # 34636 # 35676 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_33 - 347 DUF3584 PF12128.3 1201 0.033 5.3 51.1 2 2 2e-05 0.0039 8.3 20.6 613 709 225 327 220 345 0.80 # 34636 # 35676 # 1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_35 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 1 3 1.4e-05 0.0028 11.0 0.0 2 49 23 73 22 87 0.67 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_35 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 2 3 1.8e-05 0.0036 10.7 0.0 56 105 188 234 146 256 0.78 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_35 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 3 3 5.2e-05 0.01 9.2 0.0 176 227 404 462 344 467 0.75 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_18 - 990 DEAD PF00270.24 169 5.2e-09 29.7 0.0 1 1 1.1e-10 1.1e-08 28.6 0.0 15 164 268 416 249 421 0.68 # 17323 # 20292 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_71 - 622 DEAD PF00270.24 169 4.6e-05 16.8 0.0 1 1 8.7e-07 8.6e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_33 - 488 DUF815 PF05673.8 250 2.3e-06 20.5 0.0 1 1 3.7e-08 7.4e-06 18.9 0.0 19 154 208 353 194 365 0.75 # 19328 # 20791 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_71 - 622 DUF853 PF05872.7 504 1.7e-06 20.5 0.0 1 1 1.4e-08 2.7e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_71 - 622 TrwB_AAD_bind PF10412.4 386 3.9e-19 62.3 0.0 1 2 8.9e-13 8.7e-11 34.8 0.0 10 54 167 211 161 314 0.70 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_71 - 622 TrwB_AAD_bind PF10412.4 386 3.9e-19 62.3 0.0 2 2 6.9e-10 6.8e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_92 - 816 TrwB_AAD_bind PF10412.4 386 4.5e-08 25.9 0.0 1 2 1.5e-05 0.0015 11.1 0.0 6 72 442 517 438 520 0.85 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_92 - 816 TrwB_AAD_bind PF10412.4 386 4.5e-08 25.9 0.0 2 2 5.6e-06 0.00055 12.4 0.1 232 301 643 712 613 731 0.66 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_35 - 504 AAA_11 PF13086.1 236 5.7e-07 23.2 0.1 1 1 1.9e-08 3.7e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_92 - 816 Guanylate_kin PF00625.16 183 0.00029 14.2 0.1 1 3 0.0039 0.76 3.0 0.0 3 26 452 475 450 503 0.86 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_92 - 816 Guanylate_kin PF00625.16 183 0.00029 14.2 0.1 2 3 0.0094 1.9 1.8 0.1 75 115 596 637 580 703 0.83 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_92 - 816 Guanylate_kin PF00625.16 183 0.00029 14.2 0.1 3 3 0.001 0.21 4.9 0.0 75 131 714 770 697 777 0.87 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_71 - 622 T4SS-DNA_transf PF02534.9 469 4.8e-05 15.9 0.0 1 2 5.2e-07 0.0001 14.8 0.0 37 115 168 249 125 365 0.73 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_71 - 622 T4SS-DNA_transf PF02534.9 469 4.8e-05 15.9 0.0 2 2 0.097 19 -2.6 0.0 328 389 494 555 474 572 0.74 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 3_7 - 140 AAA_32 PF13654.1 509 0.00019 14.0 0.0 1 1 1.2e-06 0.00023 13.7 0.0 8 81 34 112 26 126 0.86 # 6009 # 6428 # -1 # ID=3_7;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_71 - 622 ArgK PF03308.11 267 0.00021 13.9 0.0 1 1 1.8e-06 0.00036 13.2 0.0 12 68 158 209 153 214 0.88 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_3 - 372 tRNA_Me_trans PF03054.11 356 0.0001 14.8 0.0 1 2 1.6e-06 0.00032 13.1 0.0 2 67 52 118 51 142 0.74 # 2568 # 3683 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_3 - 372 tRNA_Me_trans PF03054.11 356 0.0001 14.8 0.0 2 2 0.042 8.2 -1.4 0.0 193 224 274 305 236 311 0.83 # 2568 # 3683 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 3_2 - 181 RNA_helicase PF00910.17 107 0.0011 13.0 0.0 1 1 9.1e-06 0.0018 12.3 0.0 1 26 3 28 3 47 0.84 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_2 - 181 UPF0079 PF02367.12 123 0.0004 13.9 0.0 1 1 3.3e-06 0.00065 13.2 0.0 17 36 2 21 1 30 0.88 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_2 - 181 AAA_24 PF13479.1 213 0.00014 15.3 0.0 1 1 1.4e-06 0.00027 14.4 0.0 6 33 3 34 1 73 0.90 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_35 - 504 UvrD-helicase PF00580.16 315 1.1e-16 54.9 3.9 1 2 2.9e-06 0.00057 13.1 0.1 2 38 8 44 7 64 0.81 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_35 - 504 UvrD-helicase PF00580.16 315 1.1e-16 54.9 3.9 2 2 3.4e-15 6.7e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 35963 # 37474 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_2 - 181 NACHT PF05729.7 166 3e-05 17.6 0.0 1 2 7.7e-07 0.00015 15.3 0.0 2 22 2 22 1 37 0.89 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_2 - 181 NACHT PF05729.7 166 3e-05 17.6 0.0 2 2 0.045 8.9 -0.2 0.0 77 91 151 177 95 179 0.61 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_15 - 483 AAA_25 PF13481.1 194 1.7e-05 18.1 0.0 1 1 7.3e-07 3.6e-05 17.1 0.0 19 186 105 261 92 265 0.72 # 13966 # 15414 # 1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.482 1_92 - 816 AAA_25 PF13481.1 194 0.00067 12.9 0.0 1 1 3.4e-05 0.0017 11.6 0.0 36 86 454 494 447 532 0.82 # 66101 # 68548 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_50 - 262 AAA_25 PF13481.1 194 0.00076 12.8 0.0 1 1 2.4e-05 0.0012 12.1 0.0 42 91 12 51 11 134 0.78 # 29399 # 30184 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_71 - 622 AAA_25 PF13481.1 194 0.00077 12.7 0.0 1 1 4.9e-05 0.0024 11.1 0.0 20 137 159 265 145 272 0.78 # 45591 # 47456 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 3_2 - 181 AAA_28 PF13521.1 163 0.00027 14.8 0.0 1 1 2.9e-06 0.00058 13.7 0.0 2 30 3 34 2 165 0.89 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_103 - 323 AAA_5 PF07728.9 139 1.9e-18 60.4 0.0 1 1 1.6e-20 3.1e-18 59.7 0.0 2 125 64 188 63 197 0.94 # 78205 # 79173 # 1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 3_2 - 181 APS_kinase PF01583.15 157 2.7e-05 17.7 0.0 1 2 7.3e-06 0.0014 12.1 0.0 4 24 2 22 1 35 0.87 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_2 - 181 APS_kinase PF01583.15 157 2.7e-05 17.7 0.0 2 2 0.0032 0.64 3.5 0.1 34 73 107 148 95 160 0.86 # 1270 # 1812 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/b5d12b7f-a9f9-496f-a3e4-17841fd71025 # Target file: checkm_output/bins/pm1601/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1601/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/b5d12b7f-a9f9-496f-a3e4-17841fd71025 checkm_output/bins/pm1601/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:58:37 2020 # [ok]