# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_18 - 258 Eno-Rase_NADH_b PF12242.3 78 0.00016 15.4 0.1 1 1 3e-06 0.00062 13.5 0.2 37 65 6 32 1 44 0.77 # 16695 # 17468 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 1_5 - 228 UPF0020 PF01170.13 180 0.0001 15.8 0.0 1 2 0.00042 0.088 6.3 0.0 103 117 17 31 4 86 0.79 # 5506 # 6189 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_5 - 228 UPF0020 PF01170.13 180 0.0001 15.8 0.0 2 2 0.00016 0.033 7.6 0.0 28 54 163 189 158 220 0.72 # 5506 # 6189 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_10 - 232 cobW PF02492.14 178 0.001 12.4 0.0 1 1 2.5e-05 0.0017 11.7 0.0 3 21 39 57 37 80 0.85 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 13_3 - 181 cobW PF02492.14 178 0.0016 11.9 0.0 1 1 3.8e-05 0.0026 11.1 0.0 2 21 2 21 1 29 0.81 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 8_2 - 341 cobW PF02492.14 178 0.0017 11.8 0.0 1 1 4.2e-05 0.0029 11.0 0.0 4 30 5 31 3 53 0.72 # 489 # 1511 # -1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_14 - 119 RrnaAD PF00398.15 262 1.5e-05 18.0 0.0 1 1 9.1e-08 1.9e-05 17.7 0.0 9 73 29 95 23 104 0.92 # 11893 # 12249 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 3_5 - 260 IstB_IS21 PF01695.12 178 9.4e-73 237.3 0.1 1 2 0.049 10 -0.6 0.0 64 97 25 57 24 61 0.64 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_5 - 260 IstB_IS21 PF01695.12 178 9.4e-73 237.3 0.1 2 2 9.8e-75 2e-72 236.2 0.1 1 178 56 235 56 235 0.98 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_2 - 389 MipZ PF09140.6 261 8.9e-06 18.8 0.4 1 2 3.5e-06 0.00073 12.6 0.0 2 47 108 153 107 157 0.87 # 1344 # 2510 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_2 - 389 MipZ PF09140.6 261 8.9e-06 18.8 0.4 2 2 0.0011 0.23 4.4 0.0 88 134 224 270 197 292 0.84 # 1344 # 2510 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_18 - 258 3HCDH_N PF02737.13 180 0.0012 12.4 1.1 1 2 1.6e-05 0.0033 11.0 0.5 6 70 15 80 9 94 0.78 # 16695 # 17468 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_18 - 258 3HCDH_N PF02737.13 180 0.0012 12.4 1.1 2 2 0.055 11 -0.5 0.0 12 30 169 187 162 231 0.71 # 16695 # 17468 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 1_17 - 180 SSB PF00436.20 104 5.8e-41 132.6 0.4 1 1 3.5e-43 7.3e-41 132.2 0.4 1 101 6 109 6 112 0.96 # 13332 # 13871 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.598 1_14 - 119 Methyltransf_18 PF12847.2 112 0.00019 15.9 0.0 1 1 2.4e-06 0.00051 14.6 0.0 5 46 54 95 50 113 0.87 # 11893 # 12249 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_58 - 1707 UvrD_C_2 PF13538.1 104 2.9e-07 24.6 0.7 1 2 0.025 2.6 2.2 0.0 6 44 1227 1265 1223 1295 0.74 # 46316 # 51436 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 1_58 - 1707 UvrD_C_2 PF13538.1 104 2.9e-07 24.6 0.7 2 2 1e-07 1e-05 19.6 0.2 3 102 1341 1444 1339 1446 0.77 # 46316 # 51436 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 8_2 - 341 UvrD_C_2 PF13538.1 104 0.00016 15.8 0.0 1 1 3e-06 0.00032 14.8 0.0 37 103 247 329 224 330 0.65 # 489 # 1511 # -1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_39 - 876 DUF87 PF01935.12 229 2.4e-07 24.7 0.0 1 1 6.5e-09 6.8e-07 23.2 0.0 26 222 482 669 468 676 0.77 # 28115 # 30742 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 2_10 - 232 DUF87 PF01935.12 229 0.00047 13.9 0.0 1 2 3.4e-05 0.0035 11.1 0.1 26 44 39 57 21 59 0.91 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 232 DUF87 PF01935.12 229 0.00047 13.9 0.0 2 2 0.054 5.6 0.6 0.0 136 184 128 196 95 215 0.65 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 232 NB-ARC PF00931.17 287 0.0013 11.6 0.1 1 1 9.7e-06 0.002 10.9 0.1 18 37 35 54 24 65 0.87 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_5 - 260 AAA_22 PF13401.1 131 3.2e-06 21.3 0.2 1 2 0.00011 0.0046 11.0 0.0 5 21 103 119 99 131 0.83 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_5 - 260 AAA_22 PF13401.1 131 3.2e-06 21.3 0.2 2 2 0.0018 0.075 7.1 0.0 88 103 154 181 126 203 0.66 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_3 - 181 AAA_22 PF13401.1 131 3.2e-05 18.0 0.0 1 1 2.3e-06 9.7e-05 16.5 0.0 6 50 2 50 1 105 0.72 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 2_10 - 232 AAA_22 PF13401.1 131 4.9e-05 17.4 0.7 1 1 8.5e-06 0.00035 14.7 0.7 3 25 35 57 31 207 0.82 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_2 - 341 AAA_22 PF13401.1 131 6.9e-05 16.9 0.0 1 1 1.2e-05 0.00049 14.2 0.0 8 111 5 155 4 167 0.75 # 489 # 1511 # -1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_64 - 524 AAA_22 PF13401.1 131 0.0048 11.0 1.4 1 1 0.0013 0.055 7.6 0.0 12 85 266 351 264 422 0.78 # 54652 # 56223 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.566 8_3 - 522 AAA_15 PF13175.1 415 7e-17 55.4 0.1 1 2 5.1e-09 3.5e-07 23.5 0.0 2 45 5 47 4 63 0.90 # 1496 # 3061 # -1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 8_3 - 522 AAA_15 PF13175.1 415 7e-17 55.4 0.1 2 2 5e-11 3.4e-09 30.1 0.1 332 414 235 318 183 319 0.74 # 1496 # 3061 # -1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 4_3 - 276 AAA_15 PF13175.1 415 4.2e-07 23.2 0.0 1 2 4.5e-05 0.0031 10.5 0.0 23 42 34 53 19 86 0.82 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_3 - 276 AAA_15 PF13175.1 415 4.2e-07 23.2 0.0 2 2 3.6e-05 0.0025 10.8 0.0 370 410 160 200 151 202 0.91 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_10 - 232 AAA_15 PF13175.1 415 0.00051 13.1 0.0 1 2 0.00012 0.0083 9.1 0.0 25 46 34 60 9 93 0.72 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 232 AAA_15 PF13175.1 415 0.00051 13.1 0.0 2 2 0.017 1.2 2.0 0.0 372 414 164 205 140 205 0.89 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_5 - 228 N6_N4_Mtase PF01555.13 231 6.3e-37 121.2 0.0 1 2 5.1e-16 1.1e-13 45.2 0.0 1 114 21 124 21 133 0.91 # 5506 # 6189 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_5 - 228 N6_N4_Mtase PF01555.13 231 6.3e-37 121.2 0.0 2 2 6.4e-25 1.3e-22 74.3 0.0 169 228 141 200 126 203 0.90 # 5506 # 6189 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 13_3 - 181 AAA_17 PF13207.1 121 4.9e-06 21.3 0.0 1 1 1.4e-07 1e-05 20.3 0.0 1 32 2 34 2 175 0.59 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 2_10 - 232 AAA_17 PF13207.1 121 5.8e-05 17.9 0.2 1 1 1.3e-06 9e-05 17.2 0.2 2 19 39 56 38 219 0.85 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_57 - 730 AAA_17 PF13207.1 121 0.00069 14.4 0.0 1 1 2.4e-05 0.0017 13.2 0.0 3 28 189 218 187 336 0.74 # 44127 # 46316 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 4_3 - 276 AAA_21 PF13304.1 303 1.5e-17 58.4 0.0 1 2 3.9e-09 2.7e-07 24.7 0.0 1 25 35 63 35 100 0.77 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_3 - 276 AAA_21 PF13304.1 303 1.5e-17 58.4 0.0 2 2 2.5e-11 1.8e-09 31.9 0.0 232 298 138 201 107 203 0.84 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 8_3 - 522 AAA_21 PF13304.1 303 1.3e-13 45.5 0.1 1 2 2.1e-06 0.00015 15.7 0.0 2 24 27 49 27 76 0.83 # 1496 # 3061 # -1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 8_3 - 522 AAA_21 PF13304.1 303 1.3e-13 45.5 0.1 2 2 6.2e-10 4.3e-08 27.3 0.2 261 301 280 318 243 320 0.90 # 1496 # 3061 # -1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 2_10 - 232 AAA_21 PF13304.1 303 4.8e-13 43.6 0.0 1 2 5.6e-06 0.00039 14.3 0.1 1 22 38 59 38 71 0.87 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 232 AAA_21 PF13304.1 303 4.8e-13 43.6 0.0 2 2 9.3e-10 6.4e-08 26.8 0.0 234 301 141 205 134 206 0.96 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_39 - 876 MobB PF03205.9 140 0.00053 13.7 0.2 1 1 8.1e-05 0.0056 10.3 0.0 4 37 483 515 481 523 0.79 # 28115 # 30742 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 2_10 - 232 MobB PF03205.9 140 0.00055 13.6 0.0 1 1 1.4e-05 0.00099 12.8 0.0 3 20 39 56 37 108 0.84 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_57 - 730 MobB PF03205.9 140 0.0017 12.0 0.0 1 1 5.3e-05 0.0037 10.9 0.0 7 34 192 219 188 225 0.89 # 44127 # 46316 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_30 - 122 CTP_transf_2 PF01467.21 157 0.0016 12.4 0.0 1 1 8.5e-06 0.0018 12.3 0.0 32 67 7 41 2 98 0.65 # 22639 # 23004 # 1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 1_2 - 389 ArsA_ATPase PF02374.10 305 3.6e-06 20.1 0.4 1 2 1.7e-06 0.00034 13.6 0.1 9 36 115 142 109 151 0.89 # 1344 # 2510 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_2 - 389 ArsA_ATPase PF02374.10 305 3.6e-06 20.1 0.4 2 2 0.0011 0.23 4.3 0.0 123 136 231 244 221 251 0.84 # 1344 # 2510 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 3_5 - 260 PhoH PF02562.11 205 2.2e-07 24.2 0.1 1 1 3.6e-09 7.4e-07 22.5 0.0 11 48 94 131 83 159 0.83 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_5 - 260 AFG1_ATPase PF03969.11 362 0.00015 14.6 0.2 1 1 2.8e-06 0.00057 12.6 0.2 63 216 103 254 43 259 0.72 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_3 - 181 Cytidylate_kin2 PF13189.1 179 0.0021 11.9 0.0 1 2 9.1e-05 0.019 8.8 0.0 1 22 2 23 2 44 0.81 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 13_3 - 181 Cytidylate_kin2 PF13189.1 179 0.0021 11.9 0.0 2 2 0.026 5.5 0.8 0.0 110 135 96 122 94 136 0.74 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 13_3 - 181 Zeta_toxin PF06414.7 201 0.00017 14.7 0.0 1 2 2.1e-05 0.0043 10.1 0.0 19 50 3 32 1 39 0.78 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 13_3 - 181 Zeta_toxin PF06414.7 201 0.00017 14.7 0.0 2 2 0.0045 0.93 2.4 0.0 94 123 73 102 57 160 0.77 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 8_3 - 522 SMC_N PF02463.14 220 5.1e-11 36.1 0.0 1 2 4.2e-11 2.9e-09 30.4 0.0 2 69 4 67 3 79 0.85 # 1496 # 3061 # -1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 8_3 - 522 SMC_N PF02463.14 220 5.1e-11 36.1 0.0 2 2 0.0071 0.49 3.5 0.0 163 204 281 321 253 330 0.85 # 1496 # 3061 # -1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 2_10 - 232 SMC_N PF02463.14 220 5.9e-09 29.4 0.0 1 1 7e-09 4.8e-07 23.1 0.0 24 212 36 216 24 220 0.76 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 4_3 - 276 SMC_N PF02463.14 220 4.6e-08 26.4 0.2 1 1 1.7e-09 1.2e-07 25.1 0.2 25 198 34 201 22 218 0.75 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_2 - 389 VirC1 PF07015.6 231 0.00014 14.9 0.1 1 2 0.00028 0.058 6.3 0.0 4 42 109 147 107 154 0.91 # 1344 # 2510 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_2 - 389 VirC1 PF07015.6 231 0.00014 14.9 0.1 2 2 0.0003 0.062 6.2 0.1 84 139 235 290 222 312 0.77 # 1344 # 2510 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 3_5 - 260 Arch_ATPase PF01637.13 234 0.0019 11.8 0.1 1 2 3.4e-05 0.0071 9.9 0.0 8 37 90 119 87 140 0.79 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_5 - 260 Arch_ATPase PF01637.13 234 0.0019 11.8 0.1 2 2 0.071 15 -0.9 0.0 121 150 167 192 144 203 0.68 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_57 - 730 AAA_16 PF13191.1 185 7.5e-06 20.0 0.0 1 1 8.7e-07 4.5e-05 17.4 0.0 21 60 182 222 179 263 0.81 # 44127 # 46316 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 2_10 - 232 AAA_16 PF13191.1 185 1.3e-05 19.2 0.4 1 1 5.6e-07 2.9e-05 18.0 0.4 18 56 30 69 23 200 0.73 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_5 - 260 AAA_16 PF13191.1 185 0.00014 15.9 1.1 1 1 1.2e-05 0.00062 13.7 0.1 21 41 99 119 86 151 0.78 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 4_3 - 276 AAA_16 PF13191.1 185 0.00045 14.1 0.2 1 1 2.1e-05 0.0011 12.9 0.0 12 63 23 74 16 92 0.72 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 8_3 - 522 AAA_23 PF13476.1 202 6.8e-12 40.0 0.0 1 1 4.8e-13 3.3e-11 37.8 0.0 1 53 6 58 6 115 0.85 # 1496 # 3061 # -1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 4_3 - 276 AAA_23 PF13476.1 202 2.3e-05 18.7 0.2 1 1 5.7e-07 4e-05 17.9 0.2 21 40 35 54 22 64 0.86 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_10 - 232 AAA_23 PF13476.1 202 0.001 13.3 0.0 1 1 2.1e-05 0.0015 12.8 0.0 19 39 36 56 18 94 0.84 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 13_3 - 181 AAA_18 PF13238.1 129 4.1e-09 30.8 0.0 1 1 7.8e-11 8.1e-09 29.8 0.0 1 126 3 134 3 137 0.76 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 2_10 - 232 AAA_18 PF13238.1 129 8.8e-05 16.8 0.7 1 1 6.1e-06 0.00063 14.0 0.7 1 19 39 57 39 214 0.88 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_18 - 258 adh_short PF00106.20 167 1.1e-23 77.9 1.3 1 1 7.3e-26 1.5e-23 77.4 1.3 3 166 10 175 8 176 0.89 # 16695 # 17468 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 4_3 - 276 AAA_13 PF13166.1 712 0.0025 10.2 0.1 1 2 0.0015 0.16 4.2 0.2 23 36 40 53 29 66 0.83 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_3 - 276 AAA_13 PF13166.1 712 0.0025 10.2 0.1 2 2 0.0021 0.22 3.8 0.0 529 572 162 203 152 210 0.90 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_10 - 232 AAA_13 PF13166.1 712 0.0034 9.7 0.0 1 1 6.8e-05 0.0071 8.7 0.0 20 42 40 62 25 94 0.83 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_2 - 389 CbiA PF01656.18 195 2.1e-36 119.1 0.0 1 1 1.3e-38 2.8e-36 118.7 0.0 2 194 110 339 109 340 0.80 # 1344 # 2510 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_10 - 232 KaiC PF06745.8 227 0.00099 12.2 0.1 1 1 9.4e-06 0.002 11.2 0.1 7 35 25 52 22 66 0.88 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_5 - 260 AAA_14 PF13173.1 128 2.5e-06 21.4 0.0 1 1 4.5e-08 4.7e-06 20.5 0.0 2 96 102 203 101 221 0.67 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_10 - 232 AAA_14 PF13173.1 128 0.0011 12.8 0.0 1 1 2.5e-05 0.0025 11.6 0.0 2 41 36 75 35 131 0.63 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 8_3 - 522 AAA_29 PF13555.1 62 2e-07 24.5 0.0 1 1 7.4e-09 3.8e-07 23.5 0.0 2 49 5 50 4 57 0.84 # 1496 # 3061 # -1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 4_3 - 276 AAA_29 PF13555.1 62 1.5e-06 21.6 0.2 1 1 6.9e-08 3.5e-06 20.4 0.2 18 44 29 54 14 63 0.83 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_10 - 232 AAA_29 PF13555.1 62 5.6e-06 19.8 0.1 1 1 2e-07 1.1e-05 18.9 0.1 16 42 30 55 24 71 0.78 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_5 - 260 AAA_29 PF13555.1 62 0.0015 12.0 0.0 1 1 5.7e-05 0.003 11.1 0.0 19 59 98 139 89 141 0.72 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_5 - 260 AAA PF00004.24 132 3.8e-07 24.3 0.0 1 1 3.2e-09 6.6e-07 23.5 0.0 1 74 105 180 105 214 0.77 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_5 - 260 Bac_DnaA PF00308.13 219 2.2e-09 31.2 0.0 1 1 1.6e-11 3.3e-09 30.6 0.0 37 136 105 202 75 207 0.85 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 6_9 - 139 Ribosomal_S8 PF00410.14 129 0.0027 11.5 1.8 1 2 0.0059 1.2 2.9 0.1 41 73 2 29 1 35 0.56 # 4965 # 5381 # 1 # ID=6_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.360 6_9 - 139 Ribosomal_S8 PF00410.14 129 0.0027 11.5 1.8 2 2 0.00012 0.025 8.4 0.1 50 87 90 128 50 135 0.79 # 4965 # 5381 # 1 # ID=6_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.360 2_18 - 258 KR PF08659.5 181 3.7e-11 36.9 1.9 1 1 3.8e-13 7.8e-11 35.9 1.9 4 162 11 170 9 190 0.79 # 16695 # 17468 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 3_5 - 260 Sigma54_activat PF00158.21 168 0.00028 14.3 0.1 1 1 8.2e-06 0.0017 11.8 0.1 18 53 98 133 82 198 0.72 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 4_13 - 426 Pyr_redox_3 PF13738.1 203 4.6e-18 59.9 0.0 1 2 2e-16 4.1e-14 47.0 0.0 78 200 93 218 64 221 0.87 # 11620 # 12897 # 1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_13 - 426 Pyr_redox_3 PF13738.1 203 4.6e-18 59.9 0.0 2 2 2.2e-05 0.0046 10.9 0.0 48 172 234 375 225 381 0.65 # 11620 # 12897 # 1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_10 - 232 MMR_HSR1 PF01926.18 116 0.00039 14.3 0.2 1 1 6.3e-06 0.00066 13.6 0.2 2 20 39 57 38 201 0.91 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 4_3 - 276 MMR_HSR1 PF01926.18 116 0.00077 13.4 0.5 1 1 1.3e-05 0.0013 12.6 0.5 2 21 36 55 35 200 0.75 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_10 - 232 DUF258 PF03193.11 161 2.9e-06 20.5 0.0 1 1 6.1e-08 4.2e-06 19.9 0.0 19 61 19 62 4 91 0.83 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_5 - 260 DUF258 PF03193.11 161 2.7e-05 17.3 0.0 1 1 5.9e-07 4e-05 16.8 0.0 21 78 88 157 70 192 0.71 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 4_3 - 276 DUF258 PF03193.11 161 0.0005 13.2 0.1 1 1 1.3e-05 0.0009 12.4 0.1 25 67 22 65 2 71 0.79 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_57 - 730 TraG-D_C PF12696.2 128 1.5e-20 67.3 0.0 1 1 1.4e-22 2.9e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 44127 # 46316 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_2 - 389 AAA_31 PF13614.1 157 2e-09 31.5 0.0 1 2 1.4e-08 2.8e-06 21.3 0.0 2 49 108 155 107 195 0.91 # 1344 # 2510 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_2 - 389 AAA_31 PF13614.1 157 2e-09 31.5 0.0 2 2 0.00018 0.037 7.9 0.1 110 152 227 268 223 272 0.84 # 1344 # 2510 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_10 - 232 NTPase_1 PF03266.10 168 0.0002 15.0 0.1 1 2 6.9e-05 0.0071 10.0 0.0 2 44 39 83 38 91 0.80 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 232 NTPase_1 PF03266.10 168 0.0002 15.0 0.1 2 2 0.0085 0.88 3.2 0.0 87 151 153 219 115 230 0.73 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_5 - 260 NTPase_1 PF03266.10 168 0.00048 13.8 0.1 1 2 0.0032 0.33 4.5 0.1 2 30 105 133 104 153 0.83 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_5 - 260 NTPase_1 PF03266.10 168 0.00048 13.8 0.1 2 2 0.00049 0.051 7.2 0.0 88 112 157 181 144 204 0.72 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_3 - 181 AAA_33 PF13671.1 143 6.3e-10 33.0 0.0 1 1 1.3e-11 8.8e-10 32.6 0.0 2 127 3 130 2 151 0.73 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 4_3 - 276 AAA_33 PF13671.1 143 1.6e-05 18.7 0.1 1 1 1e-06 7e-05 16.7 0.1 3 33 37 82 35 203 0.61 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_10 - 232 AAA_33 PF13671.1 143 0.00078 13.3 1.4 1 1 9.2e-05 0.0063 10.3 1.4 2 19 39 56 38 214 0.73 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_5 - 228 Methyltransf_26 PF13659.1 117 4.5e-11 36.8 0.1 1 2 1e-06 7.2e-05 16.8 0.0 57 114 7 71 2 74 0.72 # 5506 # 6189 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_5 - 228 Methyltransf_26 PF13659.1 117 4.5e-11 36.8 0.1 2 2 4.3e-07 3e-05 18.0 0.0 4 44 167 206 164 222 0.82 # 5506 # 6189 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_15 - 84 Methyltransf_26 PF13659.1 117 2.1e-05 18.5 0.1 1 1 4.7e-07 3.2e-05 17.9 0.1 71 114 9 43 3 46 0.83 # 12207 # 12458 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.595 1_14 - 119 Methyltransf_26 PF13659.1 117 0.00018 15.5 0.1 1 1 4.9e-06 0.00034 14.6 0.0 4 44 54 95 51 114 0.89 # 11893 # 12249 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_58 - 1707 AAA_30 PF13604.1 196 3.3e-42 138.2 22.3 1 2 1.8e-05 0.00094 12.7 3.7 7 132 420 539 416 559 0.83 # 46316 # 51436 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 1_58 - 1707 AAA_30 PF13604.1 196 3.3e-42 138.2 22.3 2 2 9.8e-44 5.1e-42 137.6 1.6 1 186 968 1156 968 1160 0.94 # 46316 # 51436 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_10 - 232 AAA_30 PF13604.1 196 0.00022 14.8 0.4 1 1 7.4e-06 0.00038 14.0 0.4 18 58 36 76 29 202 0.87 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 4_3 - 276 AAA_30 PF13604.1 196 0.0013 12.3 0.3 1 1 5.9e-05 0.003 11.0 0.1 15 53 30 68 21 83 0.74 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_57 - 730 AAA_30 PF13604.1 196 0.0018 11.8 0.0 1 1 7.2e-05 0.0037 10.7 0.0 21 57 188 224 180 230 0.85 # 44127 # 46316 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_39 - 876 FtsK_SpoIIIE PF01580.13 205 8.6e-06 19.3 0.2 1 2 4.1e-06 0.00042 13.7 0.0 39 63 476 504 463 507 0.84 # 28115 # 30742 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_39 - 876 FtsK_SpoIIIE PF01580.13 205 8.6e-06 19.3 0.2 2 2 0.0077 0.79 3.0 0.1 75 167 530 626 529 632 0.85 # 28115 # 30742 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 2_10 - 232 FtsK_SpoIIIE PF01580.13 205 0.00027 14.4 0.0 1 1 7.6e-06 0.00079 12.9 0.0 37 60 35 58 14 77 0.81 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 5_8 - 304 TIGR02075 TIGR02075 233 0.00089 12.5 0.1 1 2 0.013 2.7 1.1 0.0 5 90 8 98 4 128 0.67 # 4590 # 5501 # 1 # ID=5_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 5_8 - 304 TIGR02075 TIGR02075 233 0.00089 12.5 0.1 2 2 0.0001 0.021 8.0 0.1 135 166 206 236 158 252 0.70 # 4590 # 5501 # 1 # ID=5_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577 1_15 - 84 MTS PF05175.9 170 9.8e-05 15.7 0.0 1 1 5.3e-07 0.00011 15.5 0.0 98 142 8 46 2 65 0.81 # 12207 # 12458 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.595 8_3 - 522 DUF2813 PF11398.3 373 6.7e-05 16.0 1.2 1 2 4.6e-06 0.00096 12.2 0.0 11 49 12 51 3 56 0.79 # 1496 # 3061 # -1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 8_3 - 522 DUF2813 PF11398.3 373 6.7e-05 16.0 1.2 2 2 0.0067 1.4 1.8 0.0 287 333 279 326 250 333 0.82 # 1496 # 3061 # -1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 5_12 - 74 FbpA PF05833.6 455 0.00071 12.1 3.6 1 1 3.7e-06 0.00076 12.0 3.6 396 451 9 63 2 67 0.77 # 8958 # 9179 # -1 # ID=5_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.518 1_15 - 84 Methyltrans_SAM PF10672.4 286 0.00036 13.3 0.0 1 1 2e-06 0.0004 13.2 0.0 196 261 9 69 4 77 0.78 # 12207 # 12458 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.595 4_13 - 426 Lycopene_cycl PF05834.7 374 5.7e-05 16.0 0.0 1 1 4.5e-07 9.3e-05 15.3 0.0 1 144 6 157 6 182 0.73 # 11620 # 12897 # 1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_10 - 232 ABC_tran PF00005.22 137 5e-36 118.0 0.0 1 1 1.4e-37 7.1e-36 117.5 0.0 1 136 26 171 26 172 0.92 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 4_3 - 276 ABC_tran PF00005.22 137 7.8e-30 97.9 0.0 1 1 2.2e-31 1.1e-29 97.4 0.0 1 136 23 170 23 171 0.89 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_5 - 260 ABC_tran PF00005.22 137 0.0003 15.0 0.3 1 1 4.8e-05 0.0025 12.1 0.0 8 30 99 121 93 136 0.86 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 8_3 - 522 ABC_tran PF00005.22 137 0.00032 14.9 0.0 1 1 1.9e-05 0.00098 13.4 0.0 14 113 27 155 17 158 0.73 # 1496 # 3061 # -1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 4_13 - 426 K_oxygenase PF13434.1 341 6.2e-118 387.5 0.0 1 1 3.6e-120 7.5e-118 387.2 0.0 2 340 4 333 3 334 0.96 # 11620 # 12897 # 1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_10 - 232 ATP-synt_ab PF00006.20 215 0.00055 13.4 0.1 1 1 8.3e-06 0.0017 11.8 0.1 8 35 29 56 23 74 0.86 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 1_5 - 228 Cons_hypoth95 PF03602.10 183 4.2e-05 16.9 0.0 1 2 0.00035 0.073 6.4 0.0 112 147 18 55 9 82 0.66 # 5506 # 6189 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_5 - 228 Cons_hypoth95 PF03602.10 183 4.2e-05 16.9 0.0 2 2 7e-05 0.014 8.6 0.0 41 62 162 183 145 219 0.78 # 5506 # 6189 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 3_5 - 260 RuvB_N PF05496.7 234 0.00076 12.5 0.0 1 1 6.5e-06 0.0013 11.7 0.0 50 119 102 182 92 190 0.65 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_58 - 1707 AAA_19 PF13245.1 76 2.5e-07 24.4 1.6 1 1 1.7e-08 8.9e-07 22.6 0.3 7 76 981 1047 974 1047 0.74 # 46316 # 51436 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_10 - 232 AAA_19 PF13245.1 76 0.00039 14.1 0.1 1 1 7.2e-05 0.0037 11.0 0.0 10 54 36 75 29 87 0.75 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_5 - 260 AAA_19 PF13245.1 76 0.00088 13.0 0.0 1 1 4.2e-05 0.0022 11.7 0.0 10 37 103 129 96 154 0.81 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_3 - 181 AAA_19 PF13245.1 76 0.00088 13.0 0.0 1 1 7e-05 0.0036 11.0 0.0 15 33 5 22 2 36 0.85 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 2_18 - 258 NAD_binding_10 PF13460.1 183 8.4e-05 16.6 1.5 1 1 3.5e-06 0.00073 13.5 1.5 2 179 11 232 10 236 0.54 # 16695 # 17468 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 1_39 - 876 AAA_10 PF12846.2 304 8e-49 160.6 0.0 1 1 3.3e-50 1.4e-48 159.8 0.0 1 294 479 768 479 774 0.88 # 28115 # 30742 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_57 - 730 AAA_10 PF12846.2 304 2e-10 34.5 0.0 1 1 9e-11 3.7e-09 30.3 0.0 3 296 187 494 186 500 0.69 # 44127 # 46316 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 3_5 - 260 AAA_10 PF12846.2 304 1.6e-05 18.3 0.7 1 1 4.8e-06 0.0002 14.8 0.1 1 33 102 134 102 171 0.89 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 2_10 - 232 AAA_10 PF12846.2 304 2.7e-05 17.6 0.0 1 1 1.7e-06 6.9e-05 16.3 0.0 4 29 39 65 37 85 0.76 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 4_3 - 276 AAA_10 PF12846.2 304 0.00038 13.9 1.4 1 1 5e-05 0.0021 11.4 1.0 4 34 36 66 33 159 0.89 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_18 - 258 adh_short_C2 PF13561.1 241 3.5e-35 115.8 0.7 1 1 1.9e-37 3.9e-35 115.6 0.7 5 240 16 252 13 253 0.91 # 16695 # 17468 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 4_3 - 276 SbcCD_C PF13558.1 90 1.4e-06 22.1 0.0 1 1 9.5e-08 9.8e-06 19.4 0.0 26 89 136 186 119 187 0.79 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_10 - 232 SbcCD_C PF13558.1 90 1.8e-05 18.6 0.2 1 1 2.6e-06 0.00027 14.8 0.2 32 89 143 187 126 188 0.76 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_5 - 260 ResIII PF04851.10 184 0.00076 13.3 0.0 1 2 6.9e-05 0.014 9.1 0.0 8 50 89 127 49 135 0.78 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_5 - 260 ResIII PF04851.10 184 0.00076 13.3 0.0 2 2 0.0088 1.8 2.3 0.0 112 163 131 181 127 202 0.72 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 8_2 - 341 Viral_helicase1 PF01443.13 234 1.3e-11 38.3 0.1 1 2 3.9e-07 4e-05 17.1 0.0 2 30 5 38 4 59 0.76 # 489 # 1511 # -1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 8_2 - 341 Viral_helicase1 PF01443.13 234 1.3e-11 38.3 0.1 2 2 1.4e-07 1.5e-05 18.5 0.1 63 233 133 330 122 331 0.67 # 489 # 1511 # -1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_58 - 1707 Viral_helicase1 PF01443.13 234 0.0018 11.7 0.0 1 2 0.00064 0.066 6.6 0.0 1 23 988 1011 988 1151 0.76 # 46316 # 51436 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 1_58 - 1707 Viral_helicase1 PF01443.13 234 0.0018 11.7 0.0 2 2 0.013 1.3 2.3 0.0 171 234 1387 1447 1342 1447 0.63 # 46316 # 51436 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 4_13 - 426 FMO-like PF00743.14 532 5.7e-06 18.6 0.0 1 2 3.9e-06 0.00081 11.5 0.0 142 200 143 198 95 219 0.87 # 11620 # 12897 # 1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_13 - 426 FMO-like PF00743.14 532 5.7e-06 18.6 0.0 2 2 0.00035 0.073 5.1 0.0 317 342 319 344 311 377 0.81 # 11620 # 12897 # 1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_13 - 426 NAD_binding_9 PF13454.1 156 7.2e-09 29.5 0.0 1 3 5.8e-08 1.2e-05 19.1 0.0 3 155 10 151 7 152 0.68 # 11620 # 12897 # 1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_13 - 426 NAD_binding_9 PF13454.1 156 7.2e-09 29.5 0.0 2 3 0.02 4.1 1.1 0.0 2 31 186 214 185 229 0.79 # 11620 # 12897 # 1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 4_13 - 426 NAD_binding_9 PF13454.1 156 7.2e-09 29.5 0.0 3 3 0.00086 0.18 5.5 0.0 116 155 287 332 254 333 0.73 # 11620 # 12897 # 1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 2_18 - 258 Epimerase PF01370.16 236 0.00013 15.3 0.1 1 1 2.2e-06 0.00045 13.6 0.1 2 227 11 238 10 248 0.74 # 16695 # 17468 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 1_57 - 730 TrwB_AAD_bind PF10412.4 386 4.2e-150 493.5 0.0 1 1 4.9e-152 5.1e-150 493.2 0.0 2 386 172 561 171 561 0.99 # 44127 # 46316 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_39 - 876 TrwB_AAD_bind PF10412.4 386 8.4e-07 21.8 0.1 1 2 4.8e-08 4.9e-06 19.2 0.0 15 53 479 517 470 547 0.80 # 28115 # 30742 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_39 - 876 TrwB_AAD_bind PF10412.4 386 8.4e-07 21.8 0.1 2 2 0.041 4.2 -0.3 0.0 261 317 713 769 684 772 0.92 # 28115 # 30742 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_58 - 1707 AAA_11 PF13086.1 236 0.00033 14.2 2.3 1 1 3e-06 0.00061 13.3 0.0 2 75 969 1039 968 1060 0.80 # 46316 # 51436 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 1_57 - 730 T4SS-DNA_transf PF02534.9 469 1.2e-09 31.2 0.0 1 1 3.2e-11 3.3e-09 29.7 0.0 264 361 382 476 198 500 0.83 # 44127 # 46316 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.525 1_39 - 876 T4SS-DNA_transf PF02534.9 469 0.00043 12.8 0.0 1 2 0.0031 0.32 3.3 0.0 105 184 533 606 470 625 0.82 # 28115 # 30742 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_39 - 876 T4SS-DNA_transf PF02534.9 469 0.00043 12.8 0.0 2 2 0.00021 0.022 7.2 0.0 319 378 711 769 662 771 0.90 # 28115 # 30742 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_14 - 119 TIGR00755 TIGR00755 256 1.1e-06 21.7 0.0 1 1 7e-09 1.4e-06 21.3 0.0 8 74 29 97 24 105 0.89 # 11893 # 12249 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577 1_39 - 876 Pox_A32 PF04665.7 241 0.0018 11.5 0.0 1 1 2.3e-05 0.0048 10.1 0.0 7 38 473 504 469 519 0.85 # 28115 # 30742 # 1 # ID=1_39;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 3_8 - 657 Plug PF07715.10 108 8e-24 78.0 1.9 1 1 2.3e-25 2.3e-23 76.5 1.9 3 108 46 149 44 149 0.94 # 4881 # 6851 # -1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.489 4_14 - 733 Plug PF07715.10 108 8.4e-20 65.1 2.2 1 1 9.6e-22 9.9e-20 64.9 0.6 3 107 44 145 42 146 0.94 # 12982 # 15180 # 1 # ID=4_14;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.547 13_3 - 181 AAA_24 PF13479.1 213 0.00021 14.9 0.0 1 1 1.2e-06 0.00026 14.5 0.0 6 33 3 34 1 99 0.87 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 8_2 - 341 UvrD-helicase PF00580.16 315 2e-08 27.7 0.1 1 2 5.9e-06 0.0012 12.0 0.1 16 69 4 49 2 78 0.83 # 489 # 1511 # -1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 8_2 - 341 UvrD-helicase PF00580.16 315 2e-08 27.7 0.1 2 2 2.6e-06 0.00054 13.2 0.0 242 294 115 170 96 174 0.86 # 489 # 1511 # -1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.542 13_3 - 181 NACHT PF05729.7 166 0.00017 15.2 0.1 1 1 4.2e-06 0.00044 13.9 0.0 2 21 2 21 1 29 0.91 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 2_10 - 232 NACHT PF05729.7 166 0.00039 14.0 0.1 1 1 1.7e-05 0.0018 11.9 0.0 3 20 39 56 37 76 0.86 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 232 AAA_25 PF13481.1 194 1.3e-05 18.6 0.0 1 2 1.5e-06 0.00011 15.6 0.0 29 58 32 62 14 131 0.78 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 232 AAA_25 PF13481.1 194 1.3e-05 18.6 0.0 2 2 0.051 3.5 0.9 0.0 161 188 175 201 165 206 0.69 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 3_5 - 260 AAA_25 PF13481.1 194 5.1e-05 16.6 0.0 1 1 1.2e-06 8.6e-05 15.9 0.0 22 58 90 127 71 183 0.79 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 4_3 - 276 AAA_25 PF13481.1 194 0.0013 12.0 0.1 1 1 6.5e-05 0.0045 10.3 0.1 30 57 30 57 23 87 0.85 # 1342 # 2169 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 3_2 - 86 ABC_tran_2 PF12848.2 85 0.0094 9.8 6.4 1 1 5.8e-05 0.012 9.4 6.4 20 76 17 76 13 84 0.75 # 512 # 769 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.543 2_10 - 232 AAA_28 PF13521.1 163 1.5e-06 22.1 0.1 1 2 1.7e-06 0.00012 16.0 0.0 2 21 39 58 38 94 0.79 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 232 AAA_28 PF13521.1 163 1.5e-06 22.1 0.1 2 2 0.0086 0.59 4.0 0.0 19 79 111 168 104 174 0.63 # 8882 # 9577 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570 13_3 - 181 AAA_28 PF13521.1 163 0.00032 14.6 0.0 1 1 1.4e-05 0.00097 13.0 0.0 2 29 3 33 2 58 0.77 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 3_5 - 260 AAA_28 PF13521.1 163 0.0025 11.7 1.8 1 1 8.9e-05 0.0062 10.4 0.2 1 43 104 151 104 172 0.70 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_5 - 260 AAA_5 PF07728.9 139 6.1e-05 16.7 0.3 1 2 3.6e-06 0.00075 13.2 0.2 1 74 104 173 104 180 0.72 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 3_5 - 260 AAA_5 PF07728.9 139 6.1e-05 16.7 0.3 2 2 0.053 11 -0.3 0.0 90 123 225 258 218 259 0.63 # 2565 # 3344 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 13_3 - 181 APS_kinase PF01583.15 157 2.7e-05 17.8 0.0 1 2 1e-05 0.0021 11.6 0.0 4 24 2 22 1 30 0.89 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 13_3 - 181 APS_kinase PF01583.15 157 2.7e-05 17.8 0.0 2 2 0.0021 0.43 4.1 0.1 34 72 107 147 91 157 0.86 # 1044 # 1586 # 1 # ID=13_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.560 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/d2b9d4bc-4ec3-4800-97b3-6a85866a13ff # Target file: checkm_output/bins/pm1592/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1592/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d2b9d4bc-4ec3-4800-97b3-6a85866a13ff checkm_output/bins/pm1592/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:58:30 2020 # [ok]