# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_78 - 215 UPF0020 PF01170.13 180 2.9e-06 20.2 0.1 1 2 0.00024 0.03 7.1 0.0 102 118 16 32 3 45 0.78 # 66569 # 67213 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.629 1_78 - 215 UPF0020 PF01170.13 180 2.9e-06 20.2 0.1 2 2 1.6e-05 0.0021 10.9 0.0 26 54 161 189 156 210 0.79 # 66569 # 67213 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.629 1_102 - 103 IstB_IS21 PF01695.12 178 4.5e-20 65.1 0.0 1 1 4.4e-22 5.6e-20 64.7 0.0 123 177 2 56 1 57 0.96 # 94543 # 94851 # -1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.508 1_87 - 215 MipZ PF09140.6 261 1.4e-13 43.7 2.6 1 2 3.7e-08 4.8e-06 19.1 0.6 2 28 3 29 2 40 0.83 # 73330 # 73974 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.426 1_87 - 215 MipZ PF09140.6 261 1.4e-13 43.7 2.6 2 2 6.6e-10 8.5e-08 24.8 0.1 83 133 59 109 31 125 0.83 # 73330 # 73974 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.426 1_28 - 1939 UvrD_C_2 PF13538.1 104 3.2e-07 23.8 0.2 1 1 7.3e-09 9.4e-07 22.3 0.2 3 102 1409 1513 1407 1515 0.67 # 24723 # 30539 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.654 1_49 - 882 DUF87 PF01935.12 229 7.6e-06 19.1 0.0 1 1 1.2e-07 1.5e-05 18.1 0.0 26 68 488 529 483 572 0.84 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_98 - 946 NB-ARC PF00931.17 287 8.8e-05 14.7 1.0 1 1 1.3e-05 0.0017 10.5 1.0 17 141 92 281 84 308 0.78 # 86246 # 89083 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.411 1_98 - 946 AAA_22 PF13401.1 131 6.8e-06 19.5 0.1 1 1 1.6e-05 0.00041 13.8 0.1 3 126 93 280 90 285 0.64 # 86246 # 89083 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.411 1_49 - 882 AAA_22 PF13401.1 131 0.00023 14.6 0.1 1 1 0.00021 0.0054 10.2 0.1 7 28 488 509 484 537 0.87 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_96 - 366 AAA_22 PF13401.1 131 0.00032 14.1 0.0 1 1 2.3e-05 0.00059 13.3 0.0 83 131 53 106 12 106 0.75 # 82712 # 83809 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.402 1_3 - 524 AAA_22 PF13401.1 131 0.00087 12.7 0.4 1 2 0.034 0.89 3.0 0.4 37 88 29 79 11 93 0.79 # 1093 # 2664 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.622 1_3 - 524 AAA_22 PF13401.1 131 0.00087 12.7 0.4 2 2 0.0022 0.057 6.8 0.0 12 84 266 350 264 365 0.65 # 1093 # 2664 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.622 1_15 - 524 AAA_22 PF13401.1 131 0.0017 11.8 0.9 1 2 0.075 1.9 1.9 0.3 40 88 32 79 11 100 0.71 # 11723 # 13294 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.628 1_15 - 524 AAA_22 PF13401.1 131 0.0017 11.8 0.9 2 2 0.002 0.052 7.0 0.0 12 84 266 350 264 413 0.73 # 11723 # 13294 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.628 1_49 - 882 KAP_NTPase PF07693.9 325 7.4e-05 15.1 0.0 1 1 9.6e-07 0.00012 14.3 0.0 7 94 472 698 468 746 0.88 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_78 - 215 N6_N4_Mtase PF01555.13 231 5.1e-36 117.5 0.0 1 2 2.8e-13 3.7e-11 36.2 0.0 1 114 21 124 21 139 0.88 # 66569 # 67213 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.629 1_78 - 215 N6_N4_Mtase PF01555.13 231 5.1e-36 117.5 0.0 2 2 1.3e-26 1.6e-24 79.9 0.0 169 229 141 201 127 203 0.91 # 66569 # 67213 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.629 1_49 - 882 AAA_17 PF13207.1 121 4.9e-05 17.4 0.0 1 1 2.6e-06 0.00011 16.3 0.0 2 97 488 607 487 647 0.61 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_98 - 946 AAA_17 PF13207.1 121 0.00012 16.2 0.0 1 1 8.4e-06 0.00036 14.6 0.0 1 74 96 179 96 263 0.68 # 86246 # 89083 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.411 1_29 - 881 AAA_17 PF13207.1 121 0.00018 15.6 0.0 1 1 1.6e-05 0.00067 13.8 0.0 3 46 197 245 195 299 0.67 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_29 - 881 MobB PF03205.9 140 0.00013 15.0 0.0 1 1 2.6e-06 0.00034 13.6 0.0 4 34 197 227 194 232 0.88 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_28 - 1939 PhoH PF02562.11 205 0.001 11.6 0.1 1 1 1.8e-05 0.0023 10.4 0.1 4 60 1063 1123 1060 1145 0.79 # 24723 # 30539 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.654 1_98 - 946 T2SE PF00437.15 272 5.7e-05 15.3 0.0 1 1 1.6e-06 0.0001 14.5 0.0 93 156 61 122 17 159 0.84 # 86246 # 89083 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.411 1_49 - 882 T2SE PF00437.15 272 0.0011 11.1 0.0 1 1 3.1e-05 0.002 10.3 0.0 125 152 482 509 391 514 0.63 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_87 - 215 VirC1 PF07015.6 231 2.3e-05 16.8 0.1 1 2 1.8e-05 0.0023 10.3 0.1 1 26 1 26 1 37 0.87 # 73330 # 73974 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.426 1_87 - 215 VirC1 PF07015.6 231 2.3e-05 16.8 0.1 2 2 0.00097 0.13 4.6 0.0 85 113 76 104 63 127 0.88 # 73330 # 73974 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.426 1_98 - 946 Arch_ATPase PF01637.13 234 2.2e-06 20.7 0.0 1 1 1e-07 6.7e-06 19.2 0.0 12 114 86 186 83 199 0.80 # 86246 # 89083 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.411 1_29 - 881 Arch_ATPase PF01637.13 234 0.0011 12.0 0.0 1 1 4.2e-05 0.0027 10.7 0.0 22 65 195 238 185 265 0.84 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_29 - 881 AAA_16 PF13191.1 185 1.7e-09 31.1 0.2 1 1 1.6e-09 5.2e-08 26.3 0.0 16 63 185 241 182 260 0.83 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_98 - 946 AAA_16 PF13191.1 185 9e-08 25.5 0.0 1 1 7.9e-09 2.5e-07 24.1 0.0 19 177 89 266 36 274 0.71 # 86246 # 89083 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.411 1_49 - 882 AAA_16 PF13191.1 185 0.00018 14.8 0.0 1 1 3.3e-05 0.0011 12.3 0.0 24 55 485 517 470 604 0.86 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_93 - 1276 AAA_16 PF13191.1 185 0.00035 13.8 0.4 1 1 0.00013 0.0041 10.4 0.0 15 51 47 84 39 107 0.74 # 77000 # 80827 # -1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.463 1_87 - 215 CbiA PF01656.18 195 2.7e-11 36.5 0.0 1 1 2.7e-13 3.5e-11 36.1 0.0 1 146 4 129 4 172 0.77 # 73330 # 73974 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.426 1_49 - 882 IIGP PF05049.8 376 0.00085 11.4 0.2 1 1 1.1e-05 0.0015 10.6 0.2 34 56 484 507 476 512 0.82 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_96 - 366 AAA_14 PF13173.1 128 3.6e-06 20.2 0.1 1 1 1e-07 1.3e-05 18.3 0.0 54 124 49 126 18 128 0.74 # 82712 # 83809 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.402 1_29 - 881 AAA_29 PF13555.1 62 0.00057 12.7 0.1 1 1 9.2e-06 0.0012 11.7 0.1 24 40 194 210 182 211 0.79 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_29 - 881 MMR_HSR1 PF01926.18 116 0.00071 12.8 0.0 1 1 1.2e-05 0.0015 11.7 0.0 2 40 196 239 195 267 0.82 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_98 - 946 DUF258 PF03193.11 161 0.00019 13.9 0.0 1 1 3.2e-06 0.00042 12.8 0.0 9 68 68 127 60 131 0.80 # 86246 # 89083 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.411 1_29 - 881 TraG-D_C PF12696.2 128 1.2e-21 70.2 0.0 1 1 1.7e-23 2.2e-21 69.3 0.0 1 128 426 549 426 549 0.84 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_78 - 215 Methyltransf_26 PF13659.1 117 5.5e-12 39.0 0.2 1 2 1.1e-07 1.4e-05 18.4 0.0 53 112 3 69 2 74 0.70 # 66569 # 67213 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.629 1_78 - 215 Methyltransf_26 PF13659.1 117 5.5e-12 39.0 0.2 2 2 9.4e-08 1.2e-05 18.6 0.1 1 48 164 210 164 214 0.88 # 66569 # 67213 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.629 1_28 - 1939 AAA_30 PF13604.1 196 7.5e-48 155.9 7.2 1 2 2.3e-05 0.0015 11.4 0.4 35 127 556 642 547 649 0.82 # 24723 # 30539 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.654 1_28 - 1939 AAA_30 PF13604.1 196 7.5e-48 155.9 7.2 2 2 1e-46 6.7e-45 146.3 1.4 2 187 1064 1253 1063 1256 0.96 # 24723 # 30539 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.654 1_98 - 946 AAA_30 PF13604.1 196 0.00089 12.1 0.0 1 1 2.9e-05 0.0019 11.0 0.0 15 49 91 125 83 130 0.86 # 86246 # 89083 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.411 1_49 - 882 FtsK_SpoIIIE PF01580.13 205 0.00038 13.2 0.0 1 2 1.5e-05 0.002 10.9 0.0 39 62 483 509 470 512 0.82 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_49 - 882 FtsK_SpoIIIE PF01580.13 205 0.00038 13.2 0.0 2 2 0.094 12 -1.5 0.0 76 132 537 591 536 636 0.74 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_98 - 946 ABC_tran PF00005.22 137 0.00012 15.6 0.0 1 1 3.5e-06 0.00045 13.8 0.0 17 86 100 179 90 232 0.68 # 86246 # 89083 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.411 1_78 - 215 Cons_hypoth95 PF03602.10 183 0.00038 13.1 0.2 1 2 0.00066 0.085 5.5 0.1 112 127 18 33 3 78 0.80 # 66569 # 67213 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.629 1_78 - 215 Cons_hypoth95 PF03602.10 183 0.00038 13.1 0.2 2 2 0.0008 0.1 5.2 0.0 44 57 165 178 152 187 0.83 # 66569 # 67213 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.629 1_28 - 1939 AAA_19 PF13245.1 76 2.7e-09 30.0 1.2 1 1 1.4e-10 1.8e-08 27.4 0.3 7 74 1076 1140 1069 1142 0.75 # 24723 # 30539 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.654 1_49 - 882 AAA_10 PF12846.2 304 9.2e-45 146.6 0.0 1 1 2.2e-46 1.5e-44 145.9 0.0 1 289 485 772 485 781 0.87 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_29 - 881 AAA_10 PF12846.2 304 1.9e-13 43.7 0.0 1 1 2.7e-14 1.7e-12 40.6 0.0 3 300 195 505 194 508 0.74 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_96 - 366 DEAD PF00270.24 169 0.00027 13.7 0.0 1 1 5.4e-06 0.00069 12.4 0.0 118 159 55 96 18 97 0.81 # 82712 # 83809 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.402 1_29 - 881 DUF815 PF05673.8 250 0.00023 13.4 0.0 1 1 3.5e-06 0.00046 12.4 0.0 26 81 166 221 148 227 0.82 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_29 - 881 TrwB_AAD_bind PF10412.4 386 9e-143 468.7 0.0 1 1 1.7e-144 1.1e-142 468.4 0.0 2 386 180 568 179 568 0.99 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_49 - 882 TrwB_AAD_bind PF10412.4 386 2.3e-06 19.6 0.0 1 1 6.7e-08 4.3e-06 18.8 0.0 15 61 485 530 475 560 0.79 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_28 - 1939 AAA_11 PF13086.1 236 0.00055 12.8 0.0 1 2 2.2e-05 0.0028 10.5 0.0 2 75 1064 1134 1063 1167 0.74 # 24723 # 30539 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.654 1_28 - 1939 AAA_11 PF13086.1 236 0.00055 12.8 0.0 2 2 0.07 9 -1.0 0.0 197 230 1163 1199 1157 1200 0.77 # 24723 # 30539 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.654 1_29 - 881 T4SS-DNA_transf PF02534.9 469 3.4e-13 42.2 0.0 1 1 1.8e-14 2.3e-12 39.4 0.0 216 425 337 548 245 569 0.77 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_49 - 882 Pox_A32 PF04665.7 241 0.0014 11.2 0.0 1 1 2e-05 0.0025 10.3 0.0 11 38 483 510 475 520 0.87 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_126 - 755 Plug PF07715.10 108 1.4e-29 95.9 0.7 1 1 1.1e-31 1.4e-29 95.9 0.7 8 108 64 178 58 178 0.96 # 112077 # 114341 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.512 1_98 - 946 UPF0079 PF02367.12 123 0.00067 12.6 0.0 1 1 1.4e-05 0.0018 11.2 0.0 16 42 95 121 85 128 0.82 # 86246 # 89083 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.411 1_55 - 171 TIGR00922 TIGR00922 172 1.1e-11 37.9 0.0 1 1 3.2e-13 4.2e-11 35.9 0.0 1 162 4 153 4 159 0.83 # 53276 # 53788 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.639 1_49 - 882 NACHT PF05729.7 166 0.00017 14.5 0.1 1 2 0.0047 0.2 4.5 0.0 102 136 73 109 63 135 0.78 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_49 - 882 NACHT PF05729.7 166 0.00017 14.5 0.1 2 2 0.0016 0.067 6.1 0.1 3 25 488 510 487 517 0.86 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_29 - 881 NACHT PF05729.7 166 0.00034 13.6 0.0 1 2 0.00014 0.0058 9.5 0.0 4 27 197 220 195 226 0.88 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_29 - 881 NACHT PF05729.7 166 0.00034 13.6 0.0 2 2 0.057 2.4 1.0 0.0 100 156 366 425 341 430 0.79 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 1_98 - 946 NACHT PF05729.7 166 0.00044 13.2 0.1 1 1 6.1e-05 0.0026 10.7 0.1 2 52 96 152 95 292 0.68 # 86246 # 89083 # 1 # ID=1_98;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.411 1_49 - 882 AAA_25 PF13481.1 194 0.0012 11.5 0.0 1 2 0.00019 0.025 7.2 0.1 37 61 489 513 483 544 0.78 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_49 - 882 AAA_25 PF13481.1 194 0.0012 11.5 0.0 2 2 0.019 2.5 0.7 0.0 142 188 693 738 632 742 0.69 # 48457 # 51102 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.604 1_78 - 215 Methyltransf_15 PF09445.5 164 0.00099 11.9 0.0 1 2 0.059 7.7 -0.7 0.0 53 80 4 30 3 38 0.90 # 66569 # 67213 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.629 1_78 - 215 Methyltransf_15 PF09445.5 164 0.00099 11.9 0.0 2 2 3.5e-05 0.0046 9.8 0.0 3 33 166 196 164 204 0.86 # 66569 # 67213 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.629 1_29 - 881 AAA_28 PF13521.1 163 0.0034 10.6 2.4 1 1 4.1e-05 0.0053 10.0 0.0 2 45 196 244 195 274 0.78 # 30536 # 33178 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.622 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/ba946106-c9a8-4878-8721-b82f8912d58b # Target file: checkm_output/bins/pm1572/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1572/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ba946106-c9a8-4878-8721-b82f8912d58b checkm_output/bins/pm1572/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:58:14 2020 # [ok]