# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_29 - 372 ATP_bind_3 PF01171.15 182 0.00019 14.2 0.0 1 2 5.2e-05 0.0068 9.2 0.0 1 59 52 110 52 129 0.78 # 14489 # 15604 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_29 - 372 ATP_bind_3 PF01171.15 182 0.00019 14.2 0.0 2 2 0.005 0.65 2.7 0.0 134 161 232 260 207 262 0.72 # 14489 # 15604 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.033 7.5 46.3 1 5 0.019 2.4 1.5 8.8 39 98 89 152 77 158 0.72 # 13039 # 14079 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.033 7.5 46.3 2 5 0.00084 0.11 5.9 3.1 50 100 146 196 143 199 0.89 # 13039 # 14079 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.033 7.5 46.3 3 5 2.6e-06 0.00033 13.9 12.2 19 100 216 294 201 297 0.85 # 13039 # 14079 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.033 7.5 46.3 4 5 0.00031 0.039 7.3 2.1 62 105 284 327 282 330 0.90 # 13039 # 14079 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.033 7.5 46.3 5 5 0.0059 0.76 3.1 1.6 82 105 304 327 296 345 0.51 # 13039 # 14079 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_73 - 262 MipZ PF09140.6 261 2.3e-10 33.2 0.0 1 2 6.6e-10 8.5e-08 24.8 0.0 2 52 4 55 3 81 0.83 # 68778 # 69563 # -1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_73 - 262 MipZ PF09140.6 261 2.3e-10 33.2 0.0 2 2 0.00031 0.041 6.2 0.0 89 122 117 150 89 166 0.74 # 68778 # 69563 # -1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_12 - 504 UvrD_C_2 PF13538.1 104 9.8e-11 35.0 0.0 1 1 3.5e-12 4.5e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_54 - 622 DUF87 PF01935.12 229 1.1e-08 28.4 0.0 1 1 4.3e-10 2.8e-08 27.1 0.0 24 63 173 211 168 269 0.87 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_33 - 816 DUF87 PF01935.12 229 4.8e-08 26.3 0.2 1 1 1.5e-09 9.7e-08 25.3 0.2 24 154 452 587 432 660 0.71 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_12 - 504 AAA_22 PF13401.1 131 4.2e-05 17.0 0.0 1 2 5.4e-05 0.0035 10.8 0.0 8 68 23 92 17 122 0.63 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 AAA_22 PF13401.1 131 4.2e-05 17.0 0.0 2 2 0.0099 0.64 3.4 0.0 82 124 189 225 164 229 0.77 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_54 - 622 AAA_22 PF13401.1 131 0.00016 15.1 0.0 1 1 8.3e-06 0.00054 13.4 0.0 3 68 171 231 166 287 0.83 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_62 - 476 DNA_methylase PF00145.12 335 7.7e-11 34.9 0.0 1 2 2.1e-11 2.7e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 61966 # 63393 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_62 - 476 DNA_methylase PF00145.12 335 7.7e-11 34.9 0.0 2 2 0.0031 0.4 2.9 0.0 290 330 407 448 341 452 0.73 # 61966 # 63393 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_59 - 93 Ribosomal_L2_C PF03947.13 130 0.00064 12.8 0.0 1 1 6.3e-06 0.00081 12.5 0.0 74 111 44 80 24 82 0.86 # 60126 # 60404 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.441 1_54 - 622 MobB PF03205.9 140 0.00067 12.6 0.0 1 1 1.7e-05 0.0022 10.9 0.0 4 34 176 206 175 214 0.90 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_73 - 262 ArsA_ATPase PF02374.10 305 7.4e-06 18.4 0.0 1 2 3e-07 3.9e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 68778 # 69563 # -1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_73 - 262 ArsA_ATPase PF02374.10 305 7.4e-06 18.4 0.0 2 2 0.029 3.7 -0.3 0.0 124 136 124 136 106 143 0.79 # 68778 # 69563 # -1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_12 - 504 PhoH PF02562.11 205 3.3e-06 19.7 0.2 1 2 0.0013 0.17 4.3 0.0 22 45 22 45 4 61 0.78 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 PhoH PF02562.11 205 3.3e-06 19.7 0.2 2 2 7.5e-06 0.00096 11.7 0.0 122 168 196 240 193 255 0.83 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_54 - 622 T2SE PF00437.15 272 0.00024 13.3 0.0 1 1 2.9e-06 0.00038 12.6 0.0 116 162 163 206 124 227 0.78 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_29 - 372 TIGR02432 TIGR02432 189 5.2e-05 16.2 0.1 1 2 1.1e-05 0.0014 11.5 0.0 1 58 52 109 52 119 0.85 # 14489 # 15604 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_29 - 372 TIGR02432 TIGR02432 189 5.2e-05 16.2 0.1 2 2 0.0084 1.1 2.1 0.0 140 165 235 260 207 262 0.76 # 14489 # 15604 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_33 - 816 AAA_16 PF13191.1 185 3.6e-05 17.1 0.2 1 1 3.2e-06 0.0002 14.6 0.2 20 63 447 490 439 659 0.64 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_60 - 206 AAA_16 PF13191.1 185 5.4e-05 16.5 0.1 1 1 1.3e-06 8.2e-05 15.9 0.1 27 68 11 54 3 168 0.79 # 60637 # 61254 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 1_14 - 347 AAA_13 PF13166.1 712 0.0086 7.7 36.6 1 2 0.0019 0.25 2.9 28.3 283 457 85 259 71 272 0.58 # 13039 # 14079 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 AAA_13 PF13166.1 712 0.0086 7.7 36.6 2 2 2.3e-05 0.003 9.2 23.2 287 474 160 339 154 345 0.78 # 13039 # 14079 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_73 - 262 CbiA PF01656.18 195 1.5e-30 99.3 0.0 1 1 3e-32 1.9e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 68778 # 69563 # -1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_33 - 816 CbiA PF01656.18 195 0.00051 12.7 0.0 1 1 1.7e-05 0.0011 11.7 0.0 3 49 455 517 454 593 0.60 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_12 - 504 AAA_14 PF13173.1 128 2.1e-05 17.7 1.3 1 2 2.5e-05 0.0033 10.6 0.1 11 46 28 62 18 156 0.76 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 AAA_14 PF13173.1 128 2.1e-05 17.7 1.3 2 2 0.0011 0.15 5.3 0.0 51 99 176 227 127 241 0.73 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 UvrD_C PF13361.1 351 1.2e-10 34.6 0.0 1 1 1.7e-12 2.2e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_29 - 372 PAPS_reduct PF01507.14 174 4.5e-12 39.4 0.4 1 2 0.014 1.8 1.6 0.0 2 17 53 68 52 91 0.76 # 14489 # 15604 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_29 - 372 PAPS_reduct PF01507.14 174 4.5e-12 39.4 0.4 2 2 4.4e-13 5.7e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 14489 # 15604 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_70 - 212 N6_Mtase PF02384.11 311 4.8e-07 22.3 0.0 1 1 5.9e-09 7.7e-07 21.7 0.0 3 97 71 166 69 201 0.72 # 66584 # 67219 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 1_54 - 622 TraG-D_C PF12696.2 128 3.7e-15 49.2 0.0 1 1 1e-16 6.6e-15 48.4 0.0 1 124 471 595 471 599 0.83 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_33 - 816 TraG-D_C PF12696.2 128 1.2e-06 21.8 0.0 1 1 4e-08 2.6e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_73 - 262 AAA_31 PF13614.1 157 1.7e-10 34.3 0.0 1 1 2.6e-12 3.4e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 68778 # 69563 # -1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_12 - 504 AAA_30 PF13604.1 196 6.3e-08 25.7 0.1 1 2 9.2e-07 0.00012 15.0 0.0 19 80 20 81 11 109 0.77 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 AAA_30 PF13604.1 196 6.3e-08 25.7 0.1 2 2 0.00017 0.022 7.5 0.0 115 133 211 229 174 278 0.75 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_54 - 622 FtsK_SpoIIIE PF01580.13 205 1.1e-07 24.8 0.0 1 2 3.8e-08 1.7e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_54 - 622 FtsK_SpoIIIE PF01580.13 205 1.1e-07 24.8 0.0 2 2 0.042 1.8 1.2 0.0 176 204 481 509 472 510 0.86 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_33 - 816 FtsK_SpoIIIE PF01580.13 205 9.8e-07 21.7 0.1 1 1 6.7e-08 2.9e-06 20.1 0.1 33 84 446 495 401 698 0.67 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_60 - 206 FtsK_SpoIIIE PF01580.13 205 0.00094 11.9 0.2 1 1 7.1e-05 0.003 10.3 0.0 34 53 4 23 1 28 0.83 # 60637 # 61254 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 1_12 - 504 AAA_19 PF13245.1 76 2e-09 30.4 0.0 1 1 4.2e-11 5.4e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_33 - 816 AAA_10 PF12846.2 304 3.6e-59 193.9 0.2 1 1 9.5e-61 6.1e-59 193.1 0.2 1 296 451 729 451 738 0.93 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_54 - 622 AAA_10 PF12846.2 304 1.4e-18 60.6 0.2 1 1 5.7e-20 3.7e-18 59.2 0.2 2 299 173 549 172 553 0.71 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_12 - 504 ResIII PF04851.10 184 1.4e-06 21.5 0.0 1 1 5.5e-08 3.6e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_54 - 622 ResIII PF04851.10 184 0.00014 15.0 0.0 1 1 4.2e-06 0.00027 14.0 0.0 23 57 170 206 129 214 0.74 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_14 - 347 DUF3584 PF12128.3 1201 0.021 5.3 51.1 1 2 0.0051 0.66 0.4 32.3 377 534 86 242 42 246 0.65 # 13039 # 14079 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 DUF3584 PF12128.3 1201 0.021 5.3 51.1 2 2 2e-05 0.0026 8.3 20.6 613 709 225 327 220 345 0.80 # 13039 # 14079 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_12 - 504 Viral_helicase1 PF01443.13 234 1.2e-10 34.6 0.0 1 3 1.4e-05 0.0018 11.0 0.0 2 49 23 73 22 87 0.67 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 Viral_helicase1 PF01443.13 234 1.2e-10 34.6 0.0 2 3 1.8e-05 0.0024 10.7 0.0 56 105 188 234 146 256 0.78 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 Viral_helicase1 PF01443.13 234 1.2e-10 34.6 0.0 3 3 5.2e-05 0.0067 9.2 0.0 176 227 404 462 344 467 0.75 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_54 - 622 DEAD PF00270.24 169 3e-05 16.8 0.0 1 1 4.4e-07 5.6e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_54 - 622 DUF853 PF05872.7 504 1.1e-06 20.5 0.0 1 1 1.4e-08 1.8e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_54 - 622 TrwB_AAD_bind PF10412.4 386 2.5e-19 62.3 0.0 1 2 8.9e-13 5.7e-11 34.8 0.0 10 54 167 211 161 314 0.70 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_54 - 622 TrwB_AAD_bind PF10412.4 386 2.5e-19 62.3 0.0 2 2 6.9e-10 4.5e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_33 - 816 TrwB_AAD_bind PF10412.4 386 2.9e-08 25.9 0.0 1 2 1.5e-05 0.00095 11.1 0.0 6 72 442 517 438 520 0.85 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_33 - 816 TrwB_AAD_bind PF10412.4 386 2.9e-08 25.9 0.0 2 2 5.6e-06 0.00036 12.4 0.1 232 301 643 712 613 731 0.66 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_12 - 504 AAA_11 PF13086.1 236 3.7e-07 23.2 0.1 1 1 1.9e-08 2.4e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_33 - 816 Guanylate_kin PF00625.16 183 0.00019 14.2 0.1 1 3 0.0039 0.5 3.0 0.0 3 26 452 475 450 503 0.86 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_33 - 816 Guanylate_kin PF00625.16 183 0.00019 14.2 0.1 2 3 0.0094 1.2 1.8 0.1 75 115 596 637 580 703 0.83 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_33 - 816 Guanylate_kin PF00625.16 183 0.00019 14.2 0.1 3 3 0.001 0.13 4.9 0.0 75 131 714 770 697 777 0.87 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_54 - 622 T4SS-DNA_transf PF02534.9 469 3.1e-05 15.9 0.0 1 2 5.2e-07 6.7e-05 14.8 0.0 37 115 168 249 125 365 0.73 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_54 - 622 T4SS-DNA_transf PF02534.9 469 3.1e-05 15.9 0.0 2 2 0.097 13 -2.6 0.0 328 389 494 555 474 572 0.74 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_54 - 622 ArgK PF03308.11 267 0.00014 13.9 0.0 1 1 1.8e-06 0.00024 13.2 0.0 12 68 158 209 153 214 0.88 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_29 - 372 tRNA_Me_trans PF03054.11 356 4.9e-05 15.2 0.0 1 2 1.1e-06 0.00015 13.6 0.0 2 71 52 122 51 144 0.74 # 14489 # 15604 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_29 - 372 tRNA_Me_trans PF03054.11 356 4.9e-05 15.2 0.0 2 2 0.042 5.4 -1.4 0.0 193 224 274 305 236 311 0.83 # 14489 # 15604 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_12 - 504 UvrD-helicase PF00580.16 315 7.1e-17 54.9 3.9 1 2 2.9e-06 0.00037 13.1 0.1 2 38 8 44 7 64 0.81 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 UvrD-helicase PF00580.16 315 7.1e-17 54.9 3.9 2 2 3.4e-15 4.4e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 11241 # 12752 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_33 - 816 AAA_25 PF13481.1 194 0.00044 12.9 0.0 1 1 2.5e-05 0.0011 11.6 0.0 36 86 454 494 447 532 0.82 # 30414 # 32861 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_73 - 262 AAA_25 PF13481.1 194 0.0005 12.7 0.0 1 1 1.8e-05 0.00078 12.1 0.0 42 91 12 51 11 134 0.78 # 68778 # 69563 # -1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_54 - 622 AAA_25 PF13481.1 194 0.00051 12.7 0.0 1 1 3.7e-05 0.0016 11.1 0.0 20 137 159 265 145 272 0.78 # 51506 # 53371 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/a224dd1e-d6e0-4787-bcdc-8b3563aa4962 # Target file: checkm_output/bins/pm155/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm155/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a224dd1e-d6e0-4787-bcdc-8b3563aa4962 checkm_output/bins/pm155/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:58:01 2020 # [ok]