# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_91 - 215 Methyltransf_12 PF08242.7 99 4.2e-07 24.1 0.2 1 1 8.8e-09 1.5e-06 22.3 0.2 1 99 57 148 57 148 0.88 # 79420 # 80064 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 1_34 - 210 MipZ PF09140.6 261 4e-11 36.1 1.4 1 3 8.6e-09 1.4e-06 21.1 0.3 2 51 4 53 3 58 0.90 # 31964 # 32593 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_34 - 210 MipZ PF09140.6 261 4e-11 36.1 1.4 2 3 2.2e-06 0.00036 13.3 0.0 87 135 68 116 54 152 0.81 # 31964 # 32593 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_34 - 210 MipZ PF09140.6 261 4e-11 36.1 1.4 3 3 0.054 9 -1.1 0.0 205 237 160 193 147 202 0.79 # 31964 # 32593 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_14 - 172 SSB PF00436.20 104 2.4e-11 37.1 0.0 1 1 2.1e-13 3.5e-11 36.6 0.0 2 88 5 97 4 111 0.88 # 11056 # 11571 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.450 1_91 - 215 Methyltransf_18 PF12847.2 112 5.6e-09 30.2 0.3 1 1 4.7e-10 7.9e-08 26.6 0.3 1 111 52 152 52 153 0.81 # 79420 # 80064 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 2_13 - 501 DUF87 PF01935.12 229 1.8e-11 37.9 0.1 1 2 3.7e-12 3.1e-10 33.9 0.0 3 65 9 76 7 110 0.79 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_13 - 501 DUF87 PF01935.12 229 1.8e-11 37.9 0.1 2 2 0.028 2.3 1.5 0.0 149 207 277 335 194 358 0.55 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 1_18 - 935 DUF87 PF01935.12 229 0.00032 14.2 2.3 1 1 5.8e-06 0.00049 13.6 0.0 20 48 127 155 117 169 0.78 # 13369 # 16173 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.417 2_13 - 501 AAA_22 PF13401.1 131 9.1e-06 19.5 0.2 1 2 8.2e-05 0.0069 10.2 0.0 5 27 30 52 26 87 0.83 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_13 - 501 AAA_22 PF13401.1 131 9.1e-06 19.5 0.2 2 2 0.0015 0.12 6.1 0.1 74 119 372 421 355 432 0.68 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_21 - 500 AAA_22 PF13401.1 131 1.2e-05 19.1 0.0 1 1 3.6e-07 3e-05 17.8 0.0 3 65 230 291 226 354 0.83 # 19879 # 21378 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.390 1_91 - 215 Methyltransf_11 PF08241.7 95 1.5e-09 31.9 0.0 1 1 1.4e-11 2.4e-09 31.3 0.0 1 95 57 150 57 150 0.97 # 79420 # 80064 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 1_33 - 388 Miro PF08477.8 119 0.00022 15.4 0.1 1 2 0.042 7.1 0.8 0.0 51 103 31 82 8 105 0.74 # 30175 # 31338 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 1_33 - 388 Miro PF08477.8 119 0.00022 15.4 0.1 2 2 1.5e-05 0.0026 11.9 0.0 2 65 166 241 165 263 0.59 # 30175 # 31338 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 1_33 - 388 MobB PF03205.9 140 1.5e-05 18.4 0.1 1 1 2.7e-07 4.6e-05 16.8 0.0 2 29 165 192 164 203 0.90 # 30175 # 31338 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 2_36 - 2134 Helicase_C PF00271.26 78 7.4e-05 16.2 0.1 1 1 1.2e-06 0.0002 14.9 0.1 25 77 1476 1538 1435 1539 0.91 # 35815 # 42216 # -1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.437 1_34 - 210 ArsA_ATPase PF02374.10 305 0.00042 13.0 2.9 1 2 5.7e-06 0.00096 11.8 2.3 4 32 6 34 1 45 0.86 # 31964 # 32593 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_34 - 210 ArsA_ATPase PF02374.10 305 0.00042 13.0 2.9 2 2 0.04 6.8 -0.8 0.0 106 134 58 87 42 96 0.73 # 31964 # 32593 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_21 - 500 T2SE PF00437.15 272 1.3e-42 139.2 0.4 1 1 3.3e-44 1.8e-42 138.7 0.4 12 248 105 359 96 385 0.85 # 19879 # 21378 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.390 1_33 - 388 T2SE PF00437.15 272 2.8e-29 95.5 0.2 1 1 7.2e-31 4e-29 94.9 0.2 92 270 134 316 28 318 0.71 # 30175 # 31338 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 2_18 - 312 T2SE PF00437.15 272 3.3e-23 75.5 1.8 1 1 8.2e-25 4.6e-23 75.1 1.8 117 266 100 249 65 258 0.80 # 17206 # 18141 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.409 1_91 - 215 CMAS PF02353.15 273 7e-08 25.5 0.2 1 1 1.2e-09 2.1e-07 23.9 0.0 56 179 46 165 40 183 0.77 # 79420 # 80064 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 1_34 - 210 Methyltransf_24 PF13578.1 106 0.00045 14.7 0.1 1 1 4.8e-06 0.0008 13.9 0.1 8 93 15 103 11 115 0.59 # 31964 # 32593 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_21 - 500 Zeta_toxin PF06414.7 201 0.00098 11.9 0.1 1 2 0.0048 0.81 2.3 0.0 48 86 63 102 50 105 0.84 # 19879 # 21378 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.390 2_21 - 500 Zeta_toxin PF06414.7 201 0.00098 11.9 0.1 2 2 0.00019 0.031 7.0 0.0 17 38 232 253 220 269 0.82 # 19879 # 21378 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.390 2_21 - 500 AAA_16 PF13191.1 185 4.5e-05 17.1 0.0 1 1 1.2e-06 0.0001 16.0 0.0 20 63 227 273 217 374 0.74 # 19879 # 21378 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.390 2_13 - 501 AAA_16 PF13191.1 185 0.0006 13.5 0.1 1 2 0.00013 0.011 9.4 0.0 25 51 30 56 20 83 0.78 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_13 - 501 AAA_16 PF13191.1 185 0.0006 13.5 0.1 2 2 0.054 4.5 0.8 0.1 134 182 370 419 243 422 0.56 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_21 - 500 AAA_23 PF13476.1 202 4.4e-07 24.0 4.6 1 2 0.083 7 0.5 2.0 104 165 26 100 6 173 0.50 # 19879 # 21378 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.390 2_21 - 500 AAA_23 PF13476.1 202 4.4e-07 24.0 4.6 2 2 5.8e-09 4.9e-07 23.9 0.0 10 51 215 263 212 289 0.84 # 19879 # 21378 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.390 1_33 - 388 AAA_23 PF13476.1 202 0.00098 13.1 0.4 1 1 2.3e-05 0.0019 12.1 0.4 18 47 162 192 149 341 0.81 # 30175 # 31338 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 1_86 - 375 AAA_13 PF13166.1 712 0.0013 10.9 29.0 1 2 0.00017 0.029 6.4 5.0 372 456 114 197 63 205 0.58 # 75470 # 76594 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.438 1_86 - 375 AAA_13 PF13166.1 712 0.0013 10.9 29.0 2 2 1.3e-05 0.0021 10.1 16.7 272 430 203 364 200 374 0.87 # 75470 # 76594 # 1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.438 1_34 - 210 CbiA PF01656.18 195 8.4e-17 54.8 1.0 1 1 9.9e-19 1.7e-16 53.8 1.0 1 128 5 113 5 177 0.68 # 31964 # 32593 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_91 - 215 Methyltransf_25 PF13649.1 101 2.6e-08 27.8 0.3 1 1 4.7e-10 7.9e-08 26.3 0.1 2 101 57 146 56 146 0.85 # 79420 # 80064 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 2_13 - 501 AAA_14 PF13173.1 128 0.00035 14.1 0.1 1 2 0.0033 0.28 4.8 0.0 5 27 32 54 29 77 0.85 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_13 - 501 AAA_14 PF13173.1 128 0.00035 14.1 0.1 2 2 0.0014 0.11 6.0 0.0 32 99 354 427 336 444 0.67 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_18 - 312 AAA_14 PF13173.1 128 0.00056 13.5 0.0 1 1 1.5e-05 0.0012 12.4 0.0 4 97 112 221 110 242 0.68 # 17206 # 18141 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.409 2_21 - 500 AAA_29 PF13555.1 62 1.7e-06 21.2 0.2 1 1 6.2e-08 3.5e-06 20.2 0.2 21 50 230 258 210 266 0.81 # 19879 # 21378 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.390 1_33 - 388 AAA_29 PF13555.1 62 0.00036 13.7 0.0 1 1 1.3e-05 0.00075 12.7 0.0 22 46 163 186 155 194 0.80 # 30175 # 31338 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 1_19 - 1032 AAA_29 PF13555.1 62 0.001 12.3 0.0 1 1 4.5e-05 0.0025 11.0 0.0 25 40 508 523 493 530 0.77 # 16217 # 19312 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.409 2_13 - 501 AAA PF00004.24 132 0.0012 12.7 0.1 1 2 0.00082 0.14 6.0 0.0 2 23 33 60 32 118 0.78 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_13 - 501 AAA PF00004.24 132 0.0012 12.7 0.1 2 2 0.0032 0.54 4.1 0.1 47 122 371 437 351 447 0.68 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_36 - 2134 N6_Mtase PF02384.11 311 4.2e-05 16.3 0.0 1 3 0.1 17 -2.1 0.0 37 63 566 595 555 606 0.75 # 35815 # 42216 # -1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.437 2_36 - 2134 N6_Mtase PF02384.11 311 4.2e-05 16.3 0.0 2 3 4.4e-06 0.00074 12.2 0.0 118 234 636 748 617 760 0.78 # 35815 # 42216 # -1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.437 2_36 - 2134 N6_Mtase PF02384.11 311 4.2e-05 16.3 0.0 3 3 0.023 3.8 0.0 0.0 13 47 2085 2117 2082 2123 0.77 # 35815 # 42216 # -1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.437 1_18 - 935 TraG-D_C PF12696.2 128 8.2e-10 32.3 0.1 1 1 2.7e-11 2.3e-09 30.9 0.1 1 117 426 541 426 550 0.74 # 13369 # 16173 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.417 1_52 - 386 TraG-D_C PF12696.2 128 0.0005 13.6 0.7 1 1 2.2e-05 0.0019 11.8 0.2 44 124 208 284 179 289 0.73 # 47508 # 48665 # 1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.383 1_34 - 210 AAA_31 PF13614.1 157 1.7e-05 18.5 0.0 1 2 2.8e-05 0.0047 10.5 0.0 2 27 4 29 4 48 0.83 # 31964 # 32593 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_34 - 210 AAA_31 PF13614.1 157 1.7e-05 18.5 0.0 2 2 0.00076 0.13 5.8 0.0 107 151 67 112 60 116 0.83 # 31964 # 32593 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_33 - 388 NTPase_1 PF03266.10 168 0.00018 14.9 0.1 1 2 5e-05 0.0084 9.5 0.0 2 33 166 197 165 203 0.91 # 30175 # 31338 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 1_33 - 388 NTPase_1 PF03266.10 168 0.00018 14.9 0.1 2 2 0.0048 0.8 3.0 0.0 109 154 251 301 223 315 0.70 # 30175 # 31338 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 2_36 - 2134 Methyltransf_26 PF13659.1 117 3.9e-11 36.7 0.0 1 1 1.7e-12 1.5e-10 34.8 0.0 2 116 580 694 579 695 0.83 # 35815 # 42216 # -1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.437 1_91 - 215 Methyltransf_26 PF13659.1 117 3.8e-07 23.8 0.0 1 1 8.6e-09 7.2e-07 22.9 0.0 2 115 54 152 53 154 0.85 # 79420 # 80064 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 2_13 - 501 FtsK_SpoIIIE PF01580.13 205 3.5e-09 30.0 0.0 1 2 1.6e-09 9e-08 25.4 0.0 27 79 16 72 7 88 0.80 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_13 - 501 FtsK_SpoIIIE PF01580.13 205 3.5e-09 30.0 0.0 2 2 0.023 1.3 2.1 0.0 177 204 402 429 386 430 0.85 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 1_18 - 935 FtsK_SpoIIIE PF01580.13 205 6.7e-08 25.8 0.0 1 1 3.4e-09 1.9e-07 24.4 0.0 21 80 111 168 102 181 0.76 # 13369 # 16173 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.417 1_33 - 388 FtsK_SpoIIIE PF01580.13 205 0.00024 14.2 0.0 1 1 8.8e-06 0.00049 13.2 0.0 41 68 166 193 149 199 0.87 # 30175 # 31338 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 1_91 - 215 MTS PF05175.9 170 2.5e-05 17.3 0.2 1 1 1.1e-06 0.00019 14.5 0.2 31 140 52 150 30 190 0.67 # 79420 # 80064 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 2_36 - 2134 Helicase_C_4 PF13871.1 278 4.1e-58 190.6 1.0 1 2 0.034 5.8 -0.2 0.0 155 215 245 305 228 328 0.75 # 35815 # 42216 # -1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.437 2_36 - 2134 Helicase_C_4 PF13871.1 278 4.1e-58 190.6 1.0 2 2 2.2e-59 3.7e-57 187.4 0.2 1 275 1426 1677 1426 1680 0.90 # 35815 # 42216 # -1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.437 1_33 - 388 Dynamin_N PF00350.18 168 0.00087 12.8 0.0 1 1 9.5e-06 0.0016 11.9 0.0 1 72 166 238 166 302 0.79 # 30175 # 31338 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 2_21 - 500 ABC_tran PF00005.22 137 2.6e-05 18.2 0.1 1 1 8.9e-07 7.4e-05 16.7 0.0 5 43 225 264 221 356 0.83 # 19879 # 21378 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.390 1_33 - 388 ABC_tran PF00005.22 137 0.00013 15.9 0.0 1 1 4.6e-06 0.00039 14.4 0.0 11 92 163 264 155 320 0.68 # 30175 # 31338 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.426 2_21 - 500 AAA_19 PF13245.1 76 0.0004 13.8 0.0 1 1 6.5e-06 0.0011 12.4 0.0 6 35 226 256 222 270 0.79 # 19879 # 21378 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.390 1_19 - 1032 AAA_10 PF12846.2 304 2.8e-48 158.5 0.0 1 1 7.7e-50 4.3e-48 157.9 0.0 2 303 507 902 506 903 0.93 # 16217 # 19312 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.409 2_13 - 501 AAA_10 PF12846.2 304 1.4e-27 90.5 0.0 1 1 1.2e-28 6.6e-27 88.3 0.0 1 289 29 449 29 451 0.80 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 1_18 - 935 AAA_10 PF12846.2 304 9.1e-10 32.0 4.0 1 1 2e-11 1.1e-09 31.7 0.2 3 298 132 501 130 506 0.69 # 13369 # 16173 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.417 2_36 - 2134 AAA_34 PF13872.1 303 1.7e-09 30.5 0.0 1 1 2.5e-11 4.3e-09 29.1 0.0 61 287 971 1203 933 1214 0.72 # 35815 # 42216 # -1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.437 2_36 - 2134 ResIII PF04851.10 184 2e-05 18.1 0.1 1 1 9.8e-07 0.00016 15.1 0.0 6 182 956 1141 948 1143 0.65 # 35815 # 42216 # -1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.437 1_91 - 215 Methyltransf_31 PF13847.1 152 2.2e-09 30.7 0.7 1 2 0.00026 0.043 7.0 0.2 4 16 53 65 50 81 0.87 # 79420 # 80064 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 1_91 - 215 Methyltransf_31 PF13847.1 152 2.2e-09 30.7 0.7 2 2 5e-09 8.4e-07 22.3 0.0 52 113 94 162 90 203 0.76 # 79420 # 80064 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 2_13 - 501 DEAD PF00270.24 169 0.00027 14.1 0.0 1 2 0.021 3.5 0.7 0.0 15 41 30 56 21 173 0.78 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_13 - 501 DEAD PF00270.24 169 0.00027 14.1 0.0 2 2 1.6e-05 0.0026 10.9 0.0 116 166 383 432 356 435 0.76 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_13 - 501 DUF853 PF05872.7 504 3e-06 19.4 0.2 1 2 3.7e-05 0.0063 8.5 0.0 8 46 15 54 9 83 0.73 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_13 - 501 DUF853 PF05872.7 504 3e-06 19.4 0.2 2 2 4.3e-05 0.0072 8.3 0.0 236 317 365 443 358 447 0.84 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 1_18 - 935 TrwB_AAD_bind PF10412.4 386 2.5e-11 36.4 0.1 1 2 6.7e-07 5.6e-05 15.5 0.0 15 54 130 169 120 173 0.92 # 13369 # 16173 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.417 1_18 - 935 TrwB_AAD_bind PF10412.4 386 2.5e-11 36.4 0.1 2 2 8.2e-08 6.9e-06 18.5 0.0 233 326 415 506 396 548 0.81 # 13369 # 16173 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.417 2_13 - 501 TrwB_AAD_bind PF10412.4 386 4.2e-06 19.2 0.0 1 2 6.6e-06 0.00055 12.2 0.0 11 42 25 56 17 78 0.81 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_13 - 501 TrwB_AAD_bind PF10412.4 386 4.2e-06 19.2 0.0 2 2 0.0015 0.12 4.5 0.0 261 286 407 432 404 456 0.78 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 1_78 - 280 RNase_PH PF01138.16 132 0.00027 14.9 0.1 1 1 2.8e-06 0.00046 14.1 0.1 1 64 51 107 51 143 0.72 # 69727 # 70566 # 1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.336 2_13 - 501 Pox_A32 PF04665.7 241 0.00084 12.3 0.0 1 2 2e-05 0.0034 10.3 0.0 17 42 33 58 22 61 0.90 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 2_13 - 501 Pox_A32 PF04665.7 241 0.00084 12.3 0.0 2 2 0.074 13 -1.4 0.0 62 149 352 439 334 478 0.61 # 11434 # 12936 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420 1_91 - 215 Methyltransf_23 PF13489.1 161 4.9e-18 59.0 0.2 1 1 3.4e-20 5.8e-18 58.8 0.2 20 160 50 190 20 191 0.76 # 79420 # 80064 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 1_18 - 935 AAA_25 PF13481.1 194 5e-05 16.4 0.0 1 1 1.2e-06 0.0001 15.4 0.0 15 108 112 194 106 229 0.83 # 13369 # 16173 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.417 1_34 - 210 AAA_25 PF13481.1 194 0.00031 13.8 1.1 1 1 2.1e-05 0.0018 11.3 1.1 42 157 12 94 5 113 0.64 # 31964 # 32593 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_91 - 215 TPMT PF05724.6 218 4.3e-06 19.9 0.0 1 1 4.5e-07 7.6e-05 15.8 0.0 10 159 24 156 17 190 0.81 # 79420 # 80064 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.406 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/6a7d905e-0645-4ddd-ae86-fcd95fe35532 # Target file: checkm_output/bins/pm1548/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1548/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/6a7d905e-0645-4ddd-ae86-fcd95fe35532 checkm_output/bins/pm1548/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:58:00 2020 # [ok]