# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_9 - 236 Mg_chelatase PF01078.16 207 0.00044 11.8 0.0 1 1 1e-05 0.0007 11.1 0.0 9 77 18 86 11 96 0.82 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_6 - 204 cobW PF02492.14 178 6.2e-35 112.6 0.0 1 1 2.2e-36 7.4e-35 112.3 0.0 3 173 6 172 4 177 0.92 # 3741 # 4352 # -1 # ID=2_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_10 - 598 cobW PF02492.14 178 0.00066 11.5 0.1 1 1 3.4e-05 0.0011 10.7 0.1 3 37 379 412 377 418 0.80 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 1_5 - 402 MipZ PF09140.6 261 1.3e-06 20.0 0.0 1 2 0.0027 0.18 3.1 0.0 3 50 111 163 109 193 0.73 # 3838 # 5043 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_5 - 402 MipZ PF09140.6 261 1.3e-06 20.0 0.0 2 2 8.7e-07 5.9e-05 14.6 0.0 87 136 233 282 220 296 0.87 # 3838 # 5043 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_38 - 276 Usp PF00582.21 140 8.1e-36 115.7 0.2 1 2 6.6e-21 4.5e-19 61.4 0.2 1 140 1 152 1 152 0.91 # 34322 # 35149 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.633 1_38 - 276 Usp PF00582.21 140 8.1e-36 115.7 0.2 2 2 9.8e-17 6.6e-15 47.9 0.0 49 140 197 275 158 275 0.73 # 34322 # 35149 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.633 2_9 - 236 NB-ARC PF00931.17 287 0.00078 10.7 1.1 1 1 2e-05 0.0014 9.8 0.7 17 40 29 52 16 56 0.81 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_9 - 236 AAA_22 PF13401.1 131 3e-06 19.8 1.0 1 1 1.8e-06 6.1e-05 15.6 1.0 4 122 31 192 27 199 0.63 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_10 - 598 AAA_22 PF13401.1 131 0.00039 12.9 0.1 1 1 2.3e-05 0.00078 12.0 0.1 7 29 379 401 373 547 0.89 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_6 - 204 ATP_bind_1 PF03029.12 238 0.00047 12.1 0.0 1 1 1.6e-05 0.0011 10.8 0.0 3 30 10 37 8 43 0.93 # 3741 # 4352 # -1 # ID=2_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_10 - 598 MutS_V PF00488.16 235 0.00068 11.4 0.1 1 2 8.1e-05 0.0055 8.4 0.0 32 63 365 396 353 398 0.87 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_10 - 598 MutS_V PF00488.16 235 0.00068 11.4 0.1 2 2 0.023 1.6 0.4 0.1 107 161 495 546 483 579 0.75 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 236 AAA_15 PF13175.1 415 0.00037 11.9 0.0 1 1 1.4e-05 0.00047 11.6 0.0 22 42 28 51 7 81 0.77 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_10 - 598 AAA_15 PF13175.1 415 0.0011 10.3 0.0 1 1 4.8e-05 0.0016 9.8 0.0 23 51 377 415 355 444 0.74 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_10 - 598 AAA_21 PF13304.1 303 2.2e-11 36.5 0.4 1 2 1.1e-07 2.6e-06 19.9 0.1 3 20 380 397 378 441 0.82 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_10 - 598 AAA_21 PF13304.1 303 2.2e-11 36.5 0.4 2 2 4.4e-06 0.0001 14.7 0.0 235 270 489 521 465 521 0.89 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 236 AAA_21 PF13304.1 303 1.7e-08 27.0 0.2 1 2 1.4e-06 3.2e-05 16.3 0.1 2 24 34 56 33 103 0.79 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_9 - 236 AAA_21 PF13304.1 303 1.7e-08 27.0 0.2 2 2 0.00022 0.0049 9.1 0.0 237 285 136 181 107 192 0.84 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_17 - 515 AAA_21 PF13304.1 303 5.7e-07 22.1 0.1 1 2 8.2e-06 0.00018 13.8 0.0 2 22 36 56 35 73 0.83 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 1_17 - 515 AAA_21 PF13304.1 303 5.7e-07 22.1 0.1 2 2 0.0017 0.038 6.2 0.0 205 297 107 201 99 201 0.79 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 2_9 - 236 Miro PF08477.8 119 0.00011 15.0 0.0 1 1 2.6e-06 0.00017 14.4 0.0 2 22 34 54 33 90 0.87 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_6 - 204 MobB PF03205.9 140 1.2e-06 20.7 0.0 1 2 9.6e-08 6.5e-06 18.3 0.0 3 36 6 39 4 100 0.90 # 3741 # 4352 # -1 # ID=2_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_6 - 204 MobB PF03205.9 140 1.2e-06 20.7 0.0 2 2 0.039 2.6 0.1 0.0 58 91 164 194 148 202 0.78 # 3741 # 4352 # -1 # ID=2_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_6 - 204 LpxK PF02606.9 326 0.00056 11.2 0.0 1 1 1.5e-05 0.001 10.4 0.0 47 72 13 38 10 115 0.91 # 3741 # 4352 # -1 # ID=2_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_9 - 236 T2SE PF00437.15 272 5.2e-05 14.5 0.1 1 1 1.2e-06 8.2e-05 13.9 0.1 114 154 17 57 2 77 0.85 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_9 - 236 SMC_N PF02463.14 220 2e-06 19.5 1.2 1 1 6.7e-06 0.00015 13.4 1.2 25 191 32 186 20 210 0.66 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_10 - 598 SMC_N PF02463.14 220 0.00013 13.5 0.1 1 1 5.6e-05 0.0013 10.4 0.1 26 44 378 396 367 566 0.69 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 1_17 - 515 SMC_N PF02463.14 220 0.00084 10.9 0.2 1 1 0.0002 0.0045 8.5 0.0 25 44 34 53 17 57 0.75 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 2_9 - 236 Arch_ATPase PF01637.13 234 0.00013 14.0 0.2 1 1 3.4e-06 0.00023 13.2 0.2 15 41 28 52 20 56 0.82 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_9 - 236 AAA_16 PF13191.1 185 2.4e-05 16.7 0.6 1 1 1.8e-06 4e-05 16.0 0.6 20 44 27 51 17 201 0.88 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_10 - 598 AAA_16 PF13191.1 185 0.00013 14.4 0.0 1 1 9.3e-06 0.00021 13.7 0.0 19 60 371 414 359 544 0.76 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_6 - 204 AAA_16 PF13191.1 185 0.00014 14.2 0.0 1 1 9.4e-06 0.00021 13.6 0.0 31 58 10 37 8 95 0.83 # 3741 # 4352 # -1 # ID=2_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_10 - 598 AAA_23 PF13476.1 202 1.8e-06 20.7 0.0 1 1 1.2e-07 2.8e-06 20.1 0.0 11 39 367 396 359 398 0.79 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 236 AAA_23 PF13476.1 202 5.7e-05 15.8 0.1 1 1 3.7e-06 8.3e-05 15.3 0.1 14 40 25 52 19 68 0.82 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_17 - 515 AAA_23 PF13476.1 202 0.00012 14.8 0.0 1 1 8.7e-06 0.0002 14.1 0.0 7 39 20 53 15 55 0.69 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 2_10 - 598 AAA_13 PF13166.1 712 0.00037 11.3 0.0 1 1 7.4e-06 0.0005 10.9 0.0 21 63 381 422 373 445 0.86 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 1_5 - 402 CbiA PF01656.18 195 1e-18 59.8 0.0 1 1 2.8e-20 1.9e-18 58.9 0.0 1 142 111 292 111 327 0.76 # 3838 # 5043 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456 2_9 - 236 AAA_14 PF13173.1 128 0.00024 13.4 0.0 1 2 3.2e-05 0.0022 10.3 0.0 2 24 31 53 30 98 0.78 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_9 - 236 AAA_14 PF13173.1 128 0.00024 13.4 0.0 2 2 0.021 1.4 1.2 0.0 56 72 147 164 108 217 0.74 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_17 - 515 AAA_29 PF13555.1 62 1.8e-06 19.9 0.1 1 1 2.4e-07 5.4e-06 18.3 0.1 15 42 26 52 18 55 0.79 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 2_9 - 236 AAA_29 PF13555.1 62 1.7e-05 16.7 0.1 1 1 1.5e-06 3.3e-05 15.8 0.1 20 43 29 51 20 59 0.82 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_10 - 598 AAA_29 PF13555.1 62 0.00016 13.6 0.0 1 1 1.5e-05 0.00034 12.5 0.0 16 40 368 393 360 397 0.73 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_10 - 598 AAA PF00004.24 132 0.00071 12.2 0.0 1 1 7.7e-05 0.0052 9.4 0.0 3 22 381 400 379 540 0.56 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 1_17 - 515 DUF258 PF03193.11 161 1.2e-06 20.2 0.4 1 2 8.6e-06 0.00029 12.4 0.0 28 65 25 63 5 82 0.82 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 1_17 - 515 DUF258 PF03193.11 161 1.2e-06 20.2 0.4 2 2 0.001 0.035 5.6 0.1 36 71 290 325 270 336 0.86 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 2_9 - 236 DUF258 PF03193.11 161 4.9e-06 18.2 0.1 1 1 2.2e-07 7.4e-06 17.6 0.1 23 59 18 55 4 88 0.80 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_5 - 402 AAA_31 PF13614.1 157 6.4e-05 15.3 0.0 1 1 5.5e-06 0.00037 12.8 0.0 108 147 235 273 230 279 0.86 # 3838 # 5043 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456 2_6 - 204 KTI12 PF08433.5 270 0.00047 11.7 0.0 1 1 9.7e-06 0.00066 11.2 0.0 8 43 10 45 6 57 0.83 # 3741 # 4352 # -1 # ID=2_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_10 - 598 AAA_30 PF13604.1 196 0.0003 12.8 0.0 1 1 7.6e-06 0.00052 12.0 0.0 17 50 375 408 369 413 0.85 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 236 FtsK_SpoIIIE PF01580.13 205 0.00091 11.1 2.7 1 1 8.1e-06 0.00055 11.8 0.4 30 59 23 52 13 55 0.88 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_17 - 515 ABC_tran PF00005.22 137 4.6e-43 139.2 0.0 1 2 2.8e-29 6.3e-28 90.1 0.0 1 137 23 171 23 171 0.96 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 1_17 - 515 ABC_tran PF00005.22 137 4.6e-43 139.2 0.0 2 2 5.9e-16 1.3e-14 47.0 0.0 3 133 281 432 279 435 0.83 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 2_9 - 236 ABC_tran PF00005.22 137 3e-32 104.1 0.0 1 1 1.8e-33 4.2e-32 103.7 0.0 1 135 21 162 21 164 0.93 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_10 - 598 ABC_tran PF00005.22 137 4.2e-27 87.5 0.0 1 1 2.7e-28 6e-27 87.0 0.0 1 137 366 519 366 519 0.87 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 236 AAA_10 PF12846.2 304 1.4e-07 23.5 1.6 1 2 1.1e-05 0.00025 12.9 0.7 4 23 34 53 32 62 0.89 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_9 - 236 AAA_10 PF12846.2 304 1.4e-07 23.5 1.6 2 2 0.00014 0.0032 9.2 0.0 219 264 152 197 135 217 0.83 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_10 - 598 AAA_10 PF12846.2 304 1.5e-05 16.8 1.3 1 2 8.8e-06 0.0002 13.2 0.6 6 34 381 409 377 442 0.76 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_10 - 598 AAA_10 PF12846.2 304 1.5e-05 16.8 1.3 2 2 0.026 0.59 1.8 0.0 165 266 456 554 435 569 0.71 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 1_17 - 515 AAA_10 PF12846.2 304 0.0002 13.2 0.6 1 2 0.00016 0.0037 9.0 0.1 5 29 37 62 35 68 0.79 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 1_17 - 515 AAA_10 PF12846.2 304 0.0002 13.2 0.6 2 2 0.064 1.5 0.5 0.0 219 267 159 207 126 230 0.81 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 2_9 - 236 SbcCD_C PF13558.1 90 0.00064 12.0 0.2 1 1 5.1e-05 0.0034 9.7 0.2 25 43 128 146 123 180 0.83 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_10 - 598 DUF3584 PF12128.3 1201 0.0013 8.4 0.1 1 1 2.4e-05 0.0017 8.1 0.1 22 37 381 396 368 397 0.82 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_6 - 204 ArgK PF03308.11 267 7.3e-11 33.6 1.0 1 2 2.2e-07 7.6e-06 17.2 0.1 29 66 3 40 2 45 0.94 # 3741 # 4352 # -1 # ID=2_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_6 - 204 ArgK PF03308.11 267 7.3e-11 33.6 1.0 2 2 8.4e-07 2.9e-05 15.3 0.1 122 191 94 164 80 197 0.75 # 3741 # 4352 # -1 # ID=2_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 2_10 - 598 ArgK PF03308.11 267 0.00037 11.6 0.0 1 1 1.8e-05 0.00062 10.9 0.0 14 64 361 411 352 421 0.84 # 7572 # 9365 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 1_17 - 515 UPF0079 PF02367.12 123 5e-05 15.3 0.3 1 1 3.1e-06 0.00021 13.3 0.0 11 36 29 54 21 58 0.90 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 2_9 - 236 AAA_24 PF13479.1 213 5.3e-05 15.2 0.0 1 1 1e-06 7.1e-05 14.8 0.0 5 50 33 73 29 99 0.71 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_9 - 236 NACHT PF05729.7 166 1.8e-05 16.8 0.5 1 1 5.1e-07 3.5e-05 15.9 0.5 2 21 33 52 32 55 0.93 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_9 - 236 AAA_25 PF13481.1 194 4.9e-06 18.4 0.2 1 2 3.6e-06 0.00012 13.8 0.1 31 65 29 65 19 136 0.79 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_9 - 236 AAA_25 PF13481.1 194 4.9e-06 18.4 0.2 2 2 0.012 0.42 2.3 0.0 164 186 169 192 152 195 0.85 # 6868 # 7575 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_17 - 515 AAA_25 PF13481.1 194 0.00018 13.3 0.3 1 2 3.6e-05 0.0012 10.6 0.1 30 53 30 53 5 56 0.83 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 1_17 - 515 AAA_25 PF13481.1 194 0.00018 13.3 0.3 2 2 0.079 2.7 -0.3 0.0 164 188 177 201 106 202 0.66 # 13658 # 15202 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.592 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/05b3fa55-1113-4db2-9cea-8aff9d130614 # Target file: checkm_output/bins/pm1449/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1449/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/05b3fa55-1113-4db2-9cea-8aff9d130614 checkm_output/bins/pm1449/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:56:58 2020 # [ok]