# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_169 - 254 UPF0020 PF01170.13 180 8.4e-05 16.0 0.0 1 1 1.8e-06 0.00034 14.0 0.0 15 126 87 185 76 221 0.72 # 155731 # 156492 # 1 # ID=1_169;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_14 - 418 MipZ PF09140.6 261 8.8e-12 38.4 0.1 1 2 1.4e-08 2.6e-06 20.4 0.1 2 39 116 156 115 170 0.78 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_14 - 418 MipZ PF09140.6 261 8.8e-12 38.4 0.1 2 2 5.4e-07 0.0001 15.2 0.0 77 126 236 287 213 297 0.75 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_14 - 418 YhjQ PF06564.7 244 0.0014 11.8 0.2 1 2 0.00059 0.11 5.6 0.1 6 41 119 157 115 170 0.78 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_14 - 418 YhjQ PF06564.7 244 0.0014 11.8 0.2 2 2 0.002 0.38 3.8 0.0 115 149 257 291 233 297 0.83 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_36 - 126 SSB PF00436.20 104 0.00095 12.8 0.1 1 2 3.3e-05 0.0062 10.2 0.1 2 83 8 87 7 94 0.74 # 40726 # 41103 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.370 1_36 - 126 SSB PF00436.20 104 0.00095 12.8 0.1 2 2 0.033 6.2 0.6 0.0 43 60 92 109 88 112 0.83 # 40726 # 41103 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.370 1_169 - 254 Methyltransf_18 PF12847.2 112 3.5e-06 21.4 0.0 1 1 3.5e-08 6.5e-06 20.5 0.0 3 107 102 198 100 203 0.77 # 155731 # 156492 # 1 # ID=1_169;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_34 - 595 UvrD_C_2 PF13538.1 104 1.6e-12 41.3 0.0 1 1 2e-14 3.7e-12 40.1 0.0 47 103 496 562 450 563 0.79 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_38 - 353 AAA_2 PF07724.9 171 9e-06 19.5 0.0 1 1 1.1e-07 2.1e-05 18.3 0.0 5 83 98 177 95 184 0.74 # 42199 # 43257 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.409 1_124 - 695 DUF87 PF01935.12 229 0.00033 14.3 0.0 1 1 4e-06 0.00075 13.1 0.0 25 68 200 242 189 278 0.89 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_169 - 254 MetW PF07021.7 193 0.00013 15.1 0.0 1 1 2.1e-06 0.00019 14.6 0.0 13 102 100 192 90 202 0.77 # 155731 # 156492 # 1 # ID=1_169;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_180 - 564 MetW PF07021.7 193 0.0012 12.0 0.0 1 1 2.3e-05 0.0021 11.2 0.0 18 83 424 487 410 499 0.85 # 169096 # 170787 # -1 # ID=1_180;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_124 - 695 AAA_22 PF13401.1 131 0.00031 14.7 0.1 1 2 3.8e-05 0.0071 10.3 0.1 5 24 199 218 198 295 0.71 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_124 - 695 AAA_22 PF13401.1 131 0.00031 14.7 0.1 2 2 0.022 4.1 1.4 0.0 89 121 505 534 458 544 0.72 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_169 - 254 Methyltransf_11 PF08241.7 95 0.0004 14.7 0.0 1 1 4.7e-06 0.00088 13.6 0.0 5 86 109 191 105 198 0.82 # 155731 # 156492 # 1 # ID=1_169;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_14 - 418 ArsA_ATPase PF02374.10 305 1.1e-09 31.5 0.6 1 2 0.0088 1.6 1.4 0.0 214 274 14 76 6 85 0.80 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_14 - 418 ArsA_ATPase PF02374.10 305 1.1e-09 31.5 0.6 2 2 2.4e-10 4.5e-08 26.2 0.1 8 136 122 269 115 274 0.80 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_34 - 595 PhoH PF02562.11 205 5.8e-07 22.7 0.5 1 1 8.8e-08 1.6e-05 17.9 0.5 6 177 5 246 2 258 0.76 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_14 - 418 Fer4_NifH PF00142.13 273 0.00017 14.6 0.0 1 2 2.7e-06 0.0005 13.1 0.0 7 58 122 176 116 201 0.79 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_14 - 418 Fer4_NifH PF00142.13 273 0.00017 14.6 0.0 2 2 0.1 19 -1.9 0.0 30 65 324 358 321 391 0.61 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_14 - 418 CbiA PF01656.18 195 1.4e-22 73.8 0.0 1 1 1.1e-24 2e-22 73.3 0.0 1 178 117 348 117 365 0.73 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_124 - 695 KaiC PF06745.8 227 3.6e-05 16.7 0.0 1 2 7e-06 0.0013 11.6 0.0 22 78 201 259 199 342 0.79 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_124 - 695 KaiC PF06745.8 227 3.6e-05 16.7 0.0 2 2 0.0039 0.73 2.6 0.0 48 105 357 414 348 425 0.85 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_38 - 353 AAA PF00004.24 132 0.0004 14.4 0.0 1 1 4.7e-06 0.00088 13.3 0.0 1 74 99 178 99 237 0.73 # 42199 # 43257 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.409 1_34 - 595 UvrD_C PF13361.1 351 3e-42 139.1 0.0 1 1 2.9e-44 5.5e-42 138.2 0.0 2 348 254 564 253 567 0.86 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_38 - 353 Sigma54_activat PF00158.21 168 0.00023 14.4 0.0 1 1 7.9e-06 0.0015 11.8 0.0 20 120 94 189 78 223 0.65 # 42199 # 43257 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.409 1_169 - 254 N6_Mtase PF02384.11 311 7.8e-09 28.7 0.0 1 2 1.3e-05 0.00084 12.2 0.0 55 136 109 176 79 179 0.58 # 155731 # 156492 # 1 # ID=1_169;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_169 - 254 N6_Mtase PF02384.11 311 7.8e-09 28.7 0.0 2 2 6.1e-06 0.00038 13.3 0.0 161 200 179 219 176 247 0.76 # 155731 # 156492 # 1 # ID=1_169;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_180 - 564 N6_Mtase PF02384.11 311 4.7e-06 19.6 0.0 1 1 1.3e-07 8.3e-06 18.8 0.0 89 138 445 492 427 504 0.87 # 169096 # 170787 # -1 # ID=1_180;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_87 - 164 N6_Mtase PF02384.11 311 0.0016 11.3 0.0 1 1 3.2e-05 0.002 11.0 0.0 37 78 14 59 5 84 0.72 # 85998 # 86489 # 1 # ID=1_87;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 1_124 - 695 TraG-D_C PF12696.2 128 1.3e-11 38.2 0.0 1 1 1.5e-13 2.7e-11 37.2 0.0 2 112 505 617 504 631 0.82 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_14 - 418 AAA_31 PF13614.1 157 3.7e-08 27.2 0.4 1 2 9.4e-08 1.8e-05 18.5 0.0 9 128 123 270 121 292 0.83 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_14 - 418 AAA_31 PF13614.1 157 3.7e-08 27.2 0.4 2 2 0.00088 0.16 5.6 0.1 14 89 299 381 284 410 0.72 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_169 - 254 Methyltransf_26 PF13659.1 117 1.8e-13 44.4 0.1 1 1 8.2e-15 7.6e-13 42.3 0.0 1 115 101 201 101 207 0.81 # 155731 # 156492 # 1 # ID=1_169;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_180 - 564 Methyltransf_26 PF13659.1 117 8.2e-09 29.3 0.0 1 1 1.9e-10 1.8e-08 28.3 0.0 3 116 422 516 416 517 0.80 # 169096 # 170787 # -1 # ID=1_180;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_34 - 595 AAA_30 PF13604.1 196 6.5e-05 16.3 0.3 1 2 1.5e-05 0.0027 11.1 0.0 4 66 6 66 4 90 0.72 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_34 - 595 AAA_30 PF13604.1 196 6.5e-05 16.3 0.3 2 2 0.0088 1.7 2.0 0.0 91 132 187 227 162 261 0.83 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_124 - 695 FtsK_SpoIIIE PF01580.13 205 2.3e-07 24.2 0.0 1 2 5.4e-07 0.0001 15.6 0.0 22 80 181 236 170 243 0.86 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_124 - 695 FtsK_SpoIIIE PF01580.13 205 2.3e-07 24.2 0.0 2 2 0.00047 0.088 6.0 0.0 169 204 510 542 500 543 0.81 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_169 - 254 MTS PF05175.9 170 1.4e-08 28.1 0.0 1 1 2.3e-10 2.2e-08 27.4 0.0 35 144 104 205 89 224 0.72 # 155731 # 156492 # 1 # ID=1_169;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_180 - 564 MTS PF05175.9 170 5.8e-07 22.8 0.0 1 1 1.1e-08 1e-06 22.0 0.0 94 156 475 532 447 543 0.80 # 169096 # 170787 # -1 # ID=1_180;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_180 - 564 Cons_hypoth95 PF03602.10 183 0.00098 12.3 0.0 1 1 9.7e-06 0.0018 11.5 0.0 105 138 471 502 451 516 0.71 # 169096 # 170787 # -1 # ID=1_180;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_34 - 595 AAA_19 PF13245.1 76 2.8e-09 30.5 0.0 1 1 4.1e-10 3.8e-08 26.8 0.0 3 75 12 86 10 87 0.84 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_14 - 418 AAA_19 PF13245.1 76 0.00068 13.2 0.0 1 1 1.8e-05 0.0017 11.9 0.0 20 48 125 152 123 182 0.82 # 15471 # 16724 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_12 - 894 AAA_10 PF12846.2 304 1.6e-65 215.3 0.0 1 1 3.7e-67 2.3e-65 214.7 0.0 1 303 456 812 456 813 0.93 # 8951 # 11632 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.423 1_124 - 695 AAA_10 PF12846.2 304 6.1e-17 55.7 0.0 1 1 2e-18 1.2e-16 54.7 0.0 2 296 199 578 198 585 0.73 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_34 - 595 AAA_10 PF12846.2 304 0.00053 13.2 0.3 1 1 3.5e-05 0.0022 11.2 0.0 1 25 16 40 16 49 0.80 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_34 - 595 AAA_12 PF13087.1 200 1.3e-08 28.3 0.1 1 3 0.00079 0.15 5.2 0.0 98 153 33 84 13 94 0.78 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_34 - 595 AAA_12 PF13087.1 200 1.3e-08 28.3 0.1 2 3 0.0026 0.49 3.5 0.0 5 52 240 287 237 400 0.74 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_34 - 595 AAA_12 PF13087.1 200 1.3e-08 28.3 0.1 3 3 5.1e-07 9.5e-05 15.6 0.0 136 196 497 563 409 567 0.81 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_169 - 254 Methyltransf_31 PF13847.1 152 0.00026 14.4 0.0 1 1 2.6e-06 0.00049 13.5 0.0 7 106 104 197 99 240 0.78 # 155731 # 156492 # 1 # ID=1_169;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_34 - 595 Viral_helicase1 PF01443.13 234 5.2e-08 26.4 0.1 1 3 0.0028 0.53 3.5 0.0 2 21 20 39 19 91 0.63 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_34 - 595 Viral_helicase1 PF01443.13 234 5.2e-08 26.4 0.1 2 3 0.0043 0.8 2.9 0.0 40 135 167 261 132 297 0.74 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_34 - 595 Viral_helicase1 PF01443.13 234 5.2e-08 26.4 0.1 3 3 3.5e-07 6.5e-05 16.3 0.0 183 232 494 562 401 563 0.72 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_34 - 595 DEAD PF00270.24 169 5.6e-05 16.5 0.7 1 1 3.8e-06 0.00071 12.9 0.7 4 105 8 107 5 222 0.77 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_124 - 695 DUF853 PF05872.7 504 5.3e-05 15.4 0.0 1 1 6.2e-07 0.00012 14.3 0.0 10 60 187 237 179 245 0.87 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_180 - 564 Methyltransf_27 PF13708.1 194 6.7e-57 185.9 0.1 1 1 7.6e-59 1.4e-56 184.9 0.0 2 194 93 296 92 296 0.95 # 169096 # 170787 # -1 # ID=1_180;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_124 - 695 TrwB_AAD_bind PF10412.4 386 8.9e-17 54.5 0.0 1 2 6.5e-07 0.00012 14.5 0.0 16 52 199 235 191 341 0.88 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_124 - 695 TrwB_AAD_bind PF10412.4 386 8.9e-17 54.5 0.0 2 2 8.1e-14 1.5e-11 37.2 0.0 164 345 412 604 391 646 0.77 # 112881 # 114965 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425 1_169 - 254 N6-adenineMlase PF10237.4 162 1.3e-05 18.6 0.0 1 1 1.1e-07 2.1e-05 18.0 0.0 84 133 163 214 133 225 0.77 # 155731 # 156492 # 1 # ID=1_169;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_183 - 271 MethyltransfD12 PF02086.10 260 1.2e-47 156.3 0.0 1 1 7.3e-50 1.4e-47 156.1 0.0 1 256 6 248 6 252 0.91 # 172568 # 173380 # 1 # ID=1_183;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.445 1_34 - 595 UvrD-helicase PF00580.16 315 8.1e-31 101.2 2.8 1 3 5.3e-17 9.8e-15 48.4 0.0 2 105 5 91 4 95 0.92 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_34 - 595 UvrD-helicase PF00580.16 315 8.1e-31 101.2 2.8 2 3 5.5e-18 1e-15 51.6 0.3 208 314 145 248 107 249 0.86 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_34 - 595 UvrD-helicase PF00580.16 315 8.1e-31 101.2 2.8 3 3 0.036 6.7 -0.4 0.0 91 128 412 455 373 525 0.73 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_34 - 595 AAA_25 PF13481.1 194 0.00063 12.9 0.0 1 1 1.8e-05 0.0033 10.6 0.0 17 63 3 46 1 62 0.78 # 37617 # 39401 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415 1_38 - 353 AAA_5 PF07728.9 139 4.6e-34 110.9 0.0 1 1 3.9e-36 7.4e-34 110.3 0.0 1 139 98 238 98 238 0.96 # 42199 # 43257 # 1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.409 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/5f5c564a-85bb-410e-9b55-abd6f98e9178 # Target file: checkm_output/bins/pm1446/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1446/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5f5c564a-85bb-410e-9b55-abd6f98e9178 checkm_output/bins/pm1446/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:56:56 2020 # [ok]