# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_14 - 144 Mg_chelatase PF01078.16 207 0.00023 13.1 0.0 1 1 3.9e-06 0.00035 12.5 0.0 24 42 99 117 84 127 0.90 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 IstB_IS21 PF01695.12 178 4e-73 237.3 0.1 1 2 0.098 4.3 -0.6 0.0 64 97 24 56 23 60 0.64 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 3_2 - 259 IstB_IS21 PF01695.12 178 4e-73 237.3 0.1 2 2 1.9e-74 8.5e-73 236.3 0.1 1 178 55 234 55 234 0.98 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 IstB_IS21 PF01695.12 178 2.4e-34 111.0 0.2 1 2 0.027 1.2 1.2 0.2 83 111 4 32 2 33 0.89 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 144 IstB_IS21 PF01695.12 178 2.4e-34 111.0 0.2 2 2 5.8e-35 2.6e-33 107.6 0.0 1 84 51 134 51 141 0.96 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_25 - 389 MipZ PF09140.6 261 1.7e-06 20.0 0.1 1 2 8.4e-08 7.4e-06 17.9 0.0 3 47 109 153 107 168 0.90 # 16382 # 17548 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 2_25 - 389 MipZ PF09140.6 261 1.7e-06 20.0 0.1 2 2 0.043 3.8 -0.8 0.0 88 128 224 264 211 274 0.76 # 16382 # 17548 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 2_1 - 153 UvrD_C_2 PF13538.1 104 2.9e-05 16.9 0.0 1 1 4.8e-07 4.2e-05 16.4 0.0 2 80 58 140 57 152 0.71 # 170 # 628 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 1_37 - 440 DUF87 PF01935.12 229 5.3e-05 15.8 0.2 1 1 1.3e-06 0.00012 14.7 0.2 24 47 163 186 162 193 0.91 # 28772 # 30091 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 3_2 - 259 AAA_22 PF13401.1 131 1.4e-06 21.3 0.2 1 2 4.4e-05 0.0019 11.1 0.0 5 21 102 118 98 130 0.83 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 3_2 - 259 AAA_22 PF13401.1 131 1.4e-06 21.3 0.2 2 2 0.00072 0.032 7.1 0.0 88 103 153 180 125 202 0.66 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 AAA_22 PF13401.1 131 0.0003 13.7 0.0 1 1 1.5e-05 0.00068 12.5 0.0 6 24 99 117 94 138 0.83 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 144 AAA_17 PF13207.1 121 1.1e-05 18.9 0.0 1 2 0.025 2.2 1.9 0.0 20 53 8 46 4 91 0.62 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 144 AAA_17 PF13207.1 121 1.1e-05 18.9 0.0 2 2 1.8e-06 0.00016 15.3 0.0 2 20 100 118 99 136 0.80 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_25 - 389 ArsA_ATPase PF02374.10 305 1.5e-06 20.1 0.0 1 2 2.3e-06 0.0001 14.1 0.0 9 40 115 147 109 154 0.90 # 16382 # 17548 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 2_25 - 389 ArsA_ATPase PF02374.10 305 1.5e-06 20.1 0.0 2 2 0.0044 0.19 3.4 0.0 125 136 233 244 223 252 0.89 # 16382 # 17548 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 2_14 - 144 ArsA_ATPase PF02374.10 305 6.7e-05 14.7 0.0 1 1 2.4e-06 0.0001 14.1 0.0 5 34 101 130 97 133 0.87 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 PhoH PF02562.11 205 9.2e-08 24.2 0.1 1 1 8e-09 3.5e-07 22.3 0.0 11 48 93 130 82 141 0.80 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 PhoH PF02562.11 205 1.9e-06 20.0 0.0 1 1 6.2e-08 2.7e-06 19.4 0.0 16 47 94 125 80 141 0.85 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 AFG1_ATPase PF03969.11 362 6.3e-05 14.6 0.2 1 1 2.7e-06 0.00024 12.7 0.2 63 216 102 253 42 258 0.72 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_25 - 389 VirC1 PF07015.6 231 8.7e-06 17.6 0.1 1 2 2.5e-05 0.0022 9.8 0.0 4 42 109 147 107 153 0.91 # 16382 # 17548 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 2_25 - 389 VirC1 PF07015.6 231 8.7e-06 17.6 0.1 2 2 0.00054 0.048 5.4 0.0 100 139 251 290 218 321 0.72 # 16382 # 17548 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 1_37 - 440 Arch_ATPase PF01637.13 234 0.00074 11.9 0.0 1 1 2.7e-05 0.0012 11.3 0.0 30 131 172 265 150 273 0.79 # 28772 # 30091 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 3_2 - 259 Arch_ATPase PF01637.13 234 0.00082 11.8 0.1 1 1 6.8e-05 0.003 10.0 0.0 8 37 89 118 86 139 0.79 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 AAA_16 PF13191.1 185 4e-07 22.9 0.1 1 2 0.0052 0.23 4.1 0.0 122 173 20 88 2 96 0.61 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 144 AAA_16 PF13191.1 185 4e-07 22.9 0.1 2 2 4.7e-07 2.1e-05 17.3 0.0 23 61 96 134 87 139 0.81 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 AAA_16 PF13191.1 185 5.9e-05 15.8 1.1 1 1 5.3e-06 0.00023 13.9 0.1 16 41 96 118 84 159 0.78 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 AAA_18 PF13238.1 129 0.00013 15.0 0.1 1 1 3.6e-06 0.00032 13.8 0.0 1 19 100 118 100 139 0.79 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_25 - 389 CbiA PF01656.18 195 5.7e-33 106.7 0.0 1 1 1.8e-34 7.8e-33 106.2 0.0 1 188 109 333 109 340 0.76 # 16382 # 17548 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 2_14 - 144 CbiA PF01656.18 195 3e-05 16.2 0.0 1 1 1.3e-06 5.9e-05 15.2 0.0 9 31 107 129 100 132 0.94 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 AAA_14 PF13173.1 128 1e-06 21.4 0.0 1 1 2.2e-08 2e-06 20.5 0.0 2 96 101 202 100 220 0.67 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 3_2 - 259 AAA_29 PF13555.1 62 0.00065 12.0 0.0 1 1 1.4e-05 0.0013 11.1 0.0 19 59 97 138 88 140 0.72 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 3_2 - 259 AAA PF00004.24 132 1.6e-07 24.3 0.0 1 1 6.3e-09 2.8e-07 23.6 0.0 1 74 104 179 104 213 0.77 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 AAA PF00004.24 132 6.6e-06 19.1 0.1 1 1 6.6e-07 2.9e-05 17.0 0.1 1 21 100 120 100 138 0.82 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 Bac_DnaA PF00308.13 219 9.3e-10 31.2 0.0 1 1 3.1e-11 1.4e-09 30.6 0.0 37 136 104 201 74 206 0.85 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 Bac_DnaA PF00308.13 219 0.00072 11.9 0.0 1 1 2.8e-05 0.0012 11.2 0.0 34 68 97 129 71 136 0.77 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 Sigma54_activat PF00158.21 168 0.00012 14.3 0.1 1 1 8.1e-06 0.00071 11.8 0.1 18 53 97 132 81 197 0.72 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 3_2 - 259 DUF258 PF03193.11 161 1.1e-05 17.4 0.0 1 1 1.9e-07 1.7e-05 16.8 0.0 21 78 87 156 69 191 0.71 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_25 - 389 AAA_31 PF13614.1 157 2.8e-06 20.1 0.1 1 2 1.6e-05 0.0007 12.3 0.0 2 49 108 155 107 178 0.86 # 16382 # 17548 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 2_25 - 389 AAA_31 PF13614.1 157 2.8e-06 20.1 0.1 2 2 0.002 0.086 5.5 0.1 116 151 229 267 217 271 0.79 # 16382 # 17548 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 2_14 - 144 AAA_31 PF13614.1 157 0.00021 14.0 0.0 1 1 1.5e-05 0.00067 12.3 0.0 10 36 106 132 85 136 0.93 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 NTPase_1 PF03266.10 168 0.0002 13.8 0.1 1 2 0.0016 0.14 4.5 0.1 2 30 104 132 103 152 0.83 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 3_2 - 259 NTPase_1 PF03266.10 168 0.0002 13.8 0.1 2 2 0.00024 0.021 7.2 0.0 88 112 156 180 143 203 0.72 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 AAA_33 PF13671.1 143 0.00022 13.8 0.3 1 2 0.07 6.2 -0.6 0.0 44 44 39 39 4 77 0.46 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 144 AAA_33 PF13671.1 143 0.00022 13.8 0.3 2 2 8.7e-06 0.00076 12.1 0.1 2 19 100 117 100 129 0.85 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 1_37 - 440 AAA_30 PF13604.1 196 0.00041 12.7 0.7 1 3 0.063 5.5 -0.8 0.0 47 72 61 86 53 96 0.91 # 28772 # 30091 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 1_37 - 440 AAA_30 PF13604.1 196 0.00041 12.7 0.7 2 3 0.00015 0.013 7.8 0.1 16 63 160 204 155 214 0.70 # 28772 # 30091 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 1_37 - 440 AAA_30 PF13604.1 196 0.00041 12.7 0.7 3 3 0.014 1.2 1.4 0.0 16 70 225 275 213 277 0.76 # 28772 # 30091 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 3_2 - 259 ABC_tran PF00005.22 137 0.00013 15.0 0.3 1 1 2.4e-05 0.001 12.1 0.0 8 30 98 120 92 135 0.86 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_37 - 440 ABC_tran PF00005.22 137 0.00028 13.9 0.1 1 1 1.7e-05 0.00076 12.5 0.1 6 35 157 186 155 209 0.91 # 28772 # 30091 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 1_37 - 440 ATP-synt_ab PF00006.20 215 2.1e-77 252.1 0.0 1 1 3.1e-79 2.8e-77 251.7 0.0 2 215 149 358 148 358 0.99 # 28772 # 30091 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 2_14 - 144 RuvB_N PF05496.7 234 6.5e-05 14.7 0.0 1 1 1.9e-06 8.5e-05 14.4 0.0 48 70 95 117 68 137 0.85 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 RuvB_N PF05496.7 234 0.00032 12.5 0.0 1 1 1.3e-05 0.00056 11.7 0.0 50 119 101 181 91 189 0.65 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 AAA_19 PF13245.1 76 9.2e-08 24.5 0.2 1 1 8.3e-09 3.7e-07 22.6 0.1 13 48 100 131 87 133 0.88 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 AAA_19 PF13245.1 76 0.00037 13.0 0.0 1 1 2.1e-05 0.00092 11.7 0.0 10 37 102 128 95 153 0.81 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 3_2 - 259 AAA_10 PF12846.2 304 6.7e-06 18.4 0.7 1 3 0.056 2.5 0.1 0.0 127 169 37 81 8 94 0.68 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 3_2 - 259 AAA_10 PF12846.2 304 6.7e-06 18.4 0.7 2 3 1.9e-06 8.3e-05 14.8 0.1 1 33 101 133 101 170 0.89 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 3_2 - 259 AAA_10 PF12846.2 304 6.7e-06 18.4 0.7 3 3 0.048 2.1 0.3 0.0 202 247 141 191 133 201 0.68 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 AAA_10 PF12846.2 304 0.00022 13.4 0.0 1 1 8.4e-06 0.00037 12.7 0.0 3 35 99 131 98 139 0.87 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 ResIII PF04851.10 184 0.00032 13.3 0.0 1 2 6.9e-05 0.0061 9.1 0.0 8 50 88 126 49 134 0.78 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 3_2 - 259 ResIII PF04851.10 184 0.00032 13.3 0.0 2 2 0.0076 0.67 2.4 0.0 112 163 130 180 124 202 0.72 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 ArgK PF03308.11 267 0.00013 13.5 0.0 1 1 2.2e-06 0.00019 12.9 0.0 28 60 96 128 80 133 0.86 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 144 AAA_24 PF13479.1 213 0.00045 12.5 0.0 1 1 7.7e-06 0.00068 12.0 0.0 5 23 99 117 95 129 0.86 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 144 NACHT PF05729.7 166 0.00018 13.9 0.0 1 1 4.8e-06 0.00042 12.7 0.0 3 27 100 124 98 137 0.84 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 144 AAA_25 PF13481.1 194 2.7e-07 22.9 0.0 1 1 1.3e-08 3.7e-07 22.4 0.0 22 64 81 129 57 138 0.76 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 AAA_25 PF13481.1 194 2.2e-05 16.7 0.0 1 1 1.2e-06 3.6e-05 15.9 0.0 22 58 89 126 70 182 0.79 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_37 - 440 AAA_25 PF13481.1 194 3.1e-05 16.1 0.2 1 1 2.5e-06 7.4e-05 14.9 0.0 24 157 151 267 135 285 0.69 # 28772 # 30091 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 2_14 - 144 AAA_28 PF13521.1 163 0.00017 14.3 0.0 1 2 0.098 4.3 -0.0 0.0 98 125 22 49 6 76 0.55 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 144 AAA_28 PF13521.1 163 0.00017 14.3 0.0 2 2 1.9e-05 0.00084 12.1 0.0 2 25 100 127 99 136 0.76 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 AAA_28 PF13521.1 163 0.00095 11.9 1.6 1 1 5.9e-05 0.0026 10.4 0.2 1 43 103 150 103 171 0.70 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_14 - 144 AAA_5 PF07728.9 139 3.6e-06 19.5 0.1 1 2 0.089 3.9 -0.1 0.0 91 126 13 49 3 61 0.52 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 144 AAA_5 PF07728.9 139 3.6e-06 19.5 0.1 2 2 4.1e-07 1.8e-05 17.2 0.0 1 37 99 138 99 140 0.81 # 9826 # 10257 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_2 - 259 AAA_5 PF07728.9 139 2.5e-05 16.7 0.3 1 1 7.2e-06 0.00032 13.2 0.2 1 74 103 172 103 179 0.72 # 1110 # 1886 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/fef81bf0-48ea-4033-af7d-ad2e69bfa026 # Target file: checkm_output/bins/pm1395/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1395/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/fef81bf0-48ea-4033-af7d-ad2e69bfa026 checkm_output/bins/pm1395/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:56:22 2020 # [ok]