# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_2 - 142 Mg_chelatase PF01078.16 207 0.00033 11.8 0.0 1 1 8.9e-06 0.00047 11.3 0.0 24 53 63 92 60 108 0.86 # 1187 # 1612 # -1 # ID=2_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.674 4_3 - 141 TIGR00250 TIGR00250 130 2.6e-53 171.3 0.0 1 1 5.6e-55 3e-53 171.1 0.0 1 130 7 136 7 136 0.99 # 2015 # 2437 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.631 2_6 - 211 IstB_IS21 PF01695.12 178 7.8e-05 14.1 0.6 1 1 7.7e-06 0.00041 11.8 0.6 56 80 12 36 5 96 0.90 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 MipZ PF09140.6 261 4.7e-10 30.9 1.5 1 3 2.9e-08 1.6e-06 19.4 0.3 2 46 4 48 3 57 0.89 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 MipZ PF09140.6 261 4.7e-10 30.9 1.5 2 3 2e-05 0.0011 10.1 0.0 89 130 70 111 50 121 0.79 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 MipZ PF09140.6 261 4.7e-10 30.9 1.5 3 3 0.079 4.2 -1.7 0.0 205 231 160 187 142 205 0.60 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 YhjQ PF06564.7 244 0.00014 13.2 0.2 1 2 0.002 0.1 3.8 0.2 4 38 5 39 1 43 0.81 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 YhjQ PF06564.7 244 0.00014 13.2 0.2 2 2 0.00017 0.0091 7.3 0.0 102 144 64 106 51 114 0.88 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 1_22 - 562 3HCDH_N PF02737.13 180 0.0017 10.0 6.7 1 2 0.0025 0.13 3.9 2.5 1 30 100 129 100 133 0.93 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 3HCDH_N PF02737.13 180 0.0017 10.0 6.7 2 2 0.00016 0.0082 7.8 0.1 2 37 273 308 272 358 0.75 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 GIDA PF01134.17 392 1e-06 19.8 8.8 1 4 2.1e-08 1.1e-06 19.7 2.9 1 52 100 153 100 166 0.88 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 GIDA PF01134.17 392 1e-06 19.8 8.8 2 4 0.055 2.9 -1.5 0.0 3 26 274 297 179 309 0.59 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 GIDA PF01134.17 392 1e-06 19.8 8.8 3 4 0.064 3.4 -1.7 0.0 128 167 339 363 312 378 0.57 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 GIDA PF01134.17 392 1e-06 19.8 8.8 4 4 0.0085 0.45 1.2 0.1 349 385 390 426 376 430 0.79 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 Pyr_redox_2 PF07992.9 201 4.1e-42 136.3 0.0 1 1 1.7e-43 9.1e-42 135.2 0.0 1 199 100 407 100 409 0.96 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_27 - 288 Usp PF00582.21 140 4.2e-32 103.3 1.1 1 2 3.2e-18 1.7e-16 52.7 1.6 4 139 6 160 4 161 0.83 # 16971 # 17834 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.624 1_27 - 288 Usp PF00582.21 140 4.2e-32 103.3 1.1 2 2 1.9e-16 1e-14 47.0 0.0 70 140 212 287 167 287 0.82 # 16971 # 17834 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.624 2_2 - 142 AAA_22 PF13401.1 131 2.3e-08 26.3 0.0 1 1 1.3e-09 3.5e-08 25.7 0.0 7 68 64 126 58 139 0.90 # 1187 # 1612 # -1 # ID=2_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.674 2_6 - 211 AAA_22 PF13401.1 131 0.00025 13.2 0.0 1 1 2e-05 0.00053 12.2 0.0 14 94 13 86 5 103 0.65 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 1_22 - 562 Trp_halogenase PF04820.9 454 0.091 3.3 7.9 1 2 0.00023 0.012 6.1 3.0 2 47 101 143 100 151 0.75 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 Trp_halogenase PF04820.9 454 0.091 3.3 7.9 2 2 0.034 1.8 -1.0 0.2 11 71 278 343 272 347 0.81 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 2_6 - 211 SRP54 PF00448.17 196 5.3e-05 14.7 0.5 1 1 1.7e-06 9.1e-05 14.0 0.5 11 95 13 91 3 104 0.79 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 1_22 - 562 NAD_binding_7 PF13241.1 103 2.6e-06 19.7 1.3 1 2 6.2e-05 0.0033 9.7 0.1 9 38 100 129 97 164 0.90 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 NAD_binding_7 PF13241.1 103 2.6e-06 19.7 1.3 2 2 0.00018 0.0098 8.2 0.1 8 45 271 314 264 383 0.67 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 2_6 - 211 AAA_17 PF13207.1 121 1.6e-06 21.0 0.0 1 1 7e-08 3.7e-06 19.8 0.0 9 87 13 101 11 129 0.58 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 MobB PF03205.9 140 1.2e-07 23.6 0.0 1 1 4.3e-09 2.3e-07 22.6 0.0 2 113 4 100 3 121 0.73 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 ArsA_ATPase PF02374.10 305 9e-06 16.9 0.5 1 2 1.2e-06 6.3e-05 14.1 0.4 4 34 6 36 3 41 0.86 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 ArsA_ATPase PF02374.10 305 9e-06 16.9 0.5 2 2 0.015 0.77 0.6 0.0 107 134 56 87 41 142 0.82 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_2 - 142 G-alpha PF00503.15 389 0.00044 11.0 0.0 1 1 9.4e-06 0.0005 10.8 0.0 54 91 57 93 41 111 0.85 # 1187 # 1612 # -1 # ID=2_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.674 2_6 - 211 Methyltransf_24 PF13578.1 106 4e-05 16.5 0.1 1 1 1.7e-06 8.8e-05 15.4 0.1 8 95 15 105 11 112 0.59 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 1_22 - 562 NAD_binding_8 PF13450.1 68 2.5e-05 16.3 4.6 1 2 6.9e-07 3.6e-05 15.8 1.2 1 35 103 136 103 155 0.91 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 NAD_binding_8 PF13450.1 68 2.5e-05 16.3 4.6 2 2 0.05 2.7 0.2 0.1 1 25 275 299 275 303 0.90 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 F420_oxidored PF03807.12 96 0.0056 9.2 6.6 1 3 0.0019 0.1 5.2 1.1 2 33 101 128 100 132 0.87 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 F420_oxidored PF03807.12 96 0.0056 9.2 6.6 2 3 0.0026 0.14 4.7 0.1 1 35 272 302 272 340 0.86 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 F420_oxidored PF03807.12 96 0.0056 9.2 6.6 3 3 0.077 4.1 0.0 0.0 23 50 351 379 311 388 0.76 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 2_6 - 211 VirC1 PF07015.6 231 4.8e-06 17.8 0.1 1 1 1.6e-07 8.3e-06 17.0 0.1 3 128 4 124 2 182 0.84 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_2 - 142 AAA_16 PF13191.1 185 7.5e-05 14.8 0.0 1 1 2.4e-06 0.00013 14.0 0.0 8 52 45 94 43 139 0.75 # 1187 # 1612 # -1 # ID=2_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.674 2_6 - 211 AAA_18 PF13238.1 129 6.8e-05 15.2 0.0 1 1 2.2e-06 0.00012 14.5 0.0 8 40 13 50 11 98 0.67 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 CbiA PF01656.18 195 1.8e-19 61.9 0.4 1 1 9.9e-21 5.2e-19 60.4 0.4 1 174 5 159 5 175 0.77 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 1_22 - 562 HI0933_like PF03486.9 409 7e-09 26.5 5.5 1 2 9.7e-07 5.2e-05 13.8 2.9 2 33 100 131 99 139 0.91 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 HI0933_like PF03486.9 409 7e-09 26.5 5.5 2 2 1.9e-06 0.0001 12.8 0.0 84 163 287 362 278 379 0.84 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 FAD_binding_2 PF00890.19 417 2.7e-06 18.4 5.5 1 3 5e-08 2.7e-06 18.4 5.5 2 32 101 131 100 138 0.91 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 FAD_binding_2 PF00890.19 417 2.7e-06 18.4 5.5 2 3 0.014 0.72 0.5 0.6 142 207 311 371 294 382 0.72 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 FAD_binding_2 PF00890.19 417 2.7e-06 18.4 5.5 3 3 0.0018 0.096 3.4 0.1 373 402 374 405 367 419 0.86 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 2_6 - 211 AAA PF00004.24 132 0.00011 14.5 0.0 1 1 3.8e-06 0.0002 13.6 0.0 8 35 13 40 7 87 0.78 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 1_22 - 562 Pyr_redox_3 PF13738.1 203 4.4e-19 61.3 0.1 1 3 3.1e-06 0.00016 13.7 0.1 167 199 98 130 70 144 0.84 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 Pyr_redox_3 PF13738.1 203 4.4e-19 61.3 0.1 2 3 4.7e-09 2.5e-07 22.9 0.0 115 201 219 304 172 306 0.78 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 Pyr_redox_3 PF13738.1 203 4.4e-19 61.3 0.1 3 3 2e-08 1.1e-06 20.9 0.0 89 147 317 372 309 427 0.83 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 2_2 - 142 TniB PF05621.6 302 1.7e-97 317.8 2.3 1 1 3.5e-99 1.9e-97 317.6 2.3 1 140 1 140 1 141 0.99 # 1187 # 1612 # -1 # ID=2_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.674 2_6 - 211 AAA_31 PF13614.1 157 6.9e-09 27.8 0.0 1 2 8.9e-08 4.7e-06 18.6 0.0 2 43 4 45 3 65 0.85 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 AAA_31 PF13614.1 157 6.9e-09 27.8 0.0 2 2 0.00024 0.013 7.5 0.0 103 150 63 111 56 116 0.83 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 1_22 - 562 K_oxygenase PF13434.1 341 8e-07 20.2 0.5 1 3 0.0064 0.34 1.7 0.3 189 223 97 129 86 132 0.76 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 K_oxygenase PF13434.1 341 8e-07 20.2 0.5 2 3 1.1e-06 5.6e-05 14.1 0.0 130 232 217 310 200 338 0.80 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 K_oxygenase PF13434.1 341 8e-07 20.2 0.5 3 3 0.013 0.7 0.7 0.0 130 160 335 366 311 378 0.69 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 2_6 - 211 AAA_19 PF13245.1 76 0.00027 12.7 3.4 1 2 0.0013 0.07 5.0 0.7 20 56 13 48 11 69 0.71 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 AAA_19 PF13245.1 76 0.00027 12.7 3.4 2 2 0.00019 0.01 7.7 0.1 2 37 73 107 69 133 0.80 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 1_22 - 562 FAD_oxidored PF12831.2 428 1.2e-06 19.7 4.0 1 2 2.3e-08 1.2e-06 19.7 4.0 2 41 101 139 100 159 0.83 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 FAD_oxidored PF12831.2 428 1.2e-06 19.7 4.0 2 2 0.032 1.7 -0.5 0.0 85 119 306 339 260 363 0.67 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 DAO PF01266.19 358 2.1e-11 35.2 10.3 1 2 4.6e-08 2.5e-06 18.6 1.4 2 35 101 134 100 161 0.85 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 DAO PF01266.19 358 2.1e-11 35.2 10.3 2 2 8.2e-09 4.4e-07 21.0 1.7 151 243 314 404 284 477 0.75 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 NAD_binding_9 PF13454.1 156 0.0044 8.8 4.2 1 3 0.0096 0.51 2.1 0.1 1 41 102 136 102 163 0.81 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 NAD_binding_9 PF13454.1 156 0.0044 8.8 4.2 2 3 0.059 3.1 -0.5 0.0 134 155 219 242 197 243 0.66 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 NAD_binding_9 PF13454.1 156 0.0044 8.8 4.2 3 3 0.00054 0.029 6.2 0.3 117 155 327 363 312 364 0.71 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 Pyr_redox PF00070.22 80 3.8e-20 64.2 5.1 1 2 2.2e-06 0.00012 14.6 1.2 2 31 101 130 100 132 0.95 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 Pyr_redox PF00070.22 80 3.8e-20 64.2 5.1 2 2 1.4e-17 7.5e-16 50.4 0.1 1 72 272 341 272 351 0.90 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 2_2 - 142 AAA_32 PF13654.1 509 5.7e-05 13.9 0.0 1 1 1.3e-06 7.1e-05 13.5 0.0 8 81 34 112 26 122 0.86 # 1187 # 1612 # -1 # ID=2_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.674 2_6 - 211 ArgK PF03308.11 267 1.9e-05 15.6 0.3 1 1 2.7e-06 0.00014 12.6 0.3 37 84 11 55 2 123 0.82 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 1_22 - 562 AlaDh_PNT_C PF01262.16 168 2.2e-06 19.3 3.7 1 2 1.5e-06 8.1e-05 14.2 1.3 3 50 81 128 79 131 0.91 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 1_22 - 562 AlaDh_PNT_C PF01262.16 168 2.2e-06 19.3 3.7 2 2 0.0012 0.063 4.8 0.0 19 54 269 304 260 333 0.86 # 13759 # 15444 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646 2_6 - 211 AAA_25 PF13481.1 194 1.7e-06 19.5 1.1 1 1 8e-07 4.2e-05 15.0 1.1 41 161 11 98 4 111 0.71 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 AAA_28 PF13521.1 163 4.1e-05 15.6 0.8 1 2 0.00021 0.011 7.7 0.2 9 23 13 31 12 94 0.78 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 2_6 - 211 AAA_28 PF13521.1 163 4.1e-05 15.6 0.8 2 2 0.00043 0.023 6.7 0.0 50 94 133 180 69 201 0.79 # 5373 # 6005 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.668 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/5e85e24f-7d83-467d-9e47-2770e834636f # Target file: checkm_output/bins/pm1387/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1387/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5e85e24f-7d83-467d-9e47-2770e834636f checkm_output/bins/pm1387/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:56:16 2020 # [ok]