# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 65 cobW PF02492.14 178 3.1e-05 13.1 0.4 1 1 3.4e-06 3.4e-05 13.0 0.4 128 175 3 49 1 53 0.84 # 446 # 640 # -1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.497 1_2 - 176 IstB_IS21 PF01695.12 178 2.8e-49 156.6 0.0 1 1 3.6e-50 3.6e-49 156.2 0.0 28 159 7 138 3 147 0.95 # 1697 # 2224 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.506 1_1 - 65 Phe_tRNA-synt_N PF02912.13 73 2.8e-05 13.5 0.1 1 1 4.4e-06 4.4e-05 12.9 0.1 26 61 22 57 21 61 0.94 # 446 # 640 # -1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.497 1_2 - 176 Bac_DnaA PF00308.13 219 6.5e-06 15.5 0.0 1 1 8.8e-07 8.8e-06 15.1 0.0 46 134 37 124 26 130 0.86 # 1697 # 2224 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.506 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/5e21e88a-40a6-4cb1-82bd-d5f34bcfb5e5 # Target file: checkm_output/bins/pm1375/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1375/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5e21e88a-40a6-4cb1-82bd-d5f34bcfb5e5 checkm_output/bins/pm1375/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:56:07 2020 # [ok]