# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_30 - 226 UPF0020 PF01170.13 180 1.9e-06 20.5 0.0 1 2 8.8e-05 0.0092 8.5 0.0 102 122 16 36 3 88 0.72 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_30 - 226 UPF0020 PF01170.13 180 1.9e-06 20.5 0.0 2 2 2.9e-05 0.003 10.1 0.0 27 54 162 188 158 216 0.72 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 1_37 - 213 cobW PF02492.14 178 0.00042 12.7 0.1 1 1 6.9e-06 0.00072 12.0 0.1 2 47 51 95 50 114 0.77 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_42 - 419 Terminase_6 PF03237.10 384 1.2e-20 66.5 0.0 1 1 1.3e-22 1.4e-20 66.3 0.0 4 382 31 403 28 405 0.89 # 29580 # 30836 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 4_1 - 254 IstB_IS21 PF01695.12 178 4.4e-73 237.4 0.1 1 2 0.095 4.9 -0.5 0.0 64 97 19 51 18 55 0.64 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 4_1 - 254 IstB_IS21 PF01695.12 178 4.4e-73 237.4 0.1 2 2 1.8e-74 9.4e-73 236.3 0.1 1 178 50 229 50 229 0.98 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_9 - 359 IstB_IS21 PF01695.12 178 0.00017 14.0 0.0 1 1 7e-06 0.00036 12.9 0.0 52 81 56 85 51 100 0.83 # 5046 # 6122 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 2_25 - 412 MipZ PF09140.6 261 6.2e-06 18.4 0.4 1 2 3.3e-05 0.0034 9.4 0.1 1 50 120 174 120 200 0.75 # 27269 # 28504 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_25 - 412 MipZ PF09140.6 261 6.2e-06 18.4 0.4 2 2 0.00022 0.023 6.7 0.0 90 135 247 292 237 297 0.89 # 27269 # 28504 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_28 - 464 AAA_2 PF07724.9 171 0.00022 14.1 0.0 1 1 1.1e-05 0.0011 11.9 0.0 7 83 53 175 48 193 0.84 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 NB-ARC PF00931.17 287 0.00042 12.2 0.0 1 1 8.9e-06 0.00092 11.0 0.0 20 160 50 226 34 287 0.66 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 AAA_22 PF13401.1 131 5.9e-09 29.1 0.1 1 1 6e-10 2.1e-08 27.4 0.1 5 123 50 201 46 209 0.74 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 AAA_22 PF13401.1 131 2.7e-07 23.7 0.0 1 1 2e-08 6.8e-07 22.5 0.0 3 86 48 176 42 195 0.73 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 254 AAA_22 PF13401.1 131 1.4e-06 21.4 0.1 1 2 6.1e-05 0.0021 11.2 0.0 5 21 97 113 93 129 0.83 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 4_1 - 254 AAA_22 PF13401.1 131 1.4e-06 21.4 0.1 2 2 0.0011 0.039 7.1 0.0 88 103 148 175 123 197 0.66 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 2_30 - 226 Methyltransf_11 PF08241.7 95 0.0006 13.3 0.0 1 3 0.045 4.7 0.8 0.0 46 65 4 25 2 28 0.77 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_30 - 226 Methyltransf_11 PF08241.7 95 0.0006 13.3 0.0 2 3 0.0023 0.24 5.0 0.0 78 93 53 68 46 70 0.85 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_30 - 226 Methyltransf_11 PF08241.7 95 0.0006 13.3 0.0 3 3 0.0066 0.69 3.5 0.0 5 41 172 207 168 223 0.74 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 1_37 - 213 PRK PF00485.13 194 4e-05 16.2 0.0 1 1 6.8e-07 7e-05 15.4 0.0 1 37 51 87 51 106 0.79 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 KAP_NTPase PF07693.9 325 2.3e-07 23.0 0.0 1 1 2.7e-09 2.8e-07 22.7 0.0 17 115 46 142 37 202 0.69 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 AAA_15 PF13175.1 415 6.3e-05 15.1 0.0 1 1 7.1e-07 7.4e-05 14.8 0.0 14 56 41 97 10 143 0.79 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_30 - 226 N6_N4_Mtase PF01555.13 231 3e-37 121.2 0.0 1 1 3.1e-37 3.2e-35 114.6 0.0 1 228 21 200 21 203 0.91 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 1_37 - 213 AAA_17 PF13207.1 121 5.4e-07 23.4 0.0 1 1 8.1e-09 8.4e-07 22.8 0.0 1 33 51 86 51 178 0.81 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_22 - 639 AAA_21 PF13304.1 303 2.6e-05 17.2 0.0 1 2 0.00046 0.048 6.5 0.0 8 22 42 56 41 97 0.88 # 15408 # 17324 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_22 - 639 AAA_21 PF13304.1 303 2.6e-05 17.2 0.0 2 2 0.00011 0.011 8.5 0.0 204 297 539 615 441 616 0.82 # 15408 # 17324 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 2_28 - 464 Miro PF08477.8 119 8.4e-05 16.1 0.2 1 1 2.5e-06 0.00026 14.5 0.1 1 26 51 87 51 181 0.59 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 MobB PF03205.9 140 3.6e-06 19.7 0.0 1 1 1.6e-07 8.5e-06 18.5 0.0 2 37 51 86 50 102 0.89 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_28 - 464 MobB PF03205.9 140 0.00075 12.2 0.0 1 1 3.1e-05 0.0016 11.1 0.0 3 41 52 88 50 98 0.88 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_34 - 520 Helicase_C PF00271.26 78 5e-14 45.0 0.0 1 1 1.5e-15 1.5e-13 43.4 0.0 2 78 387 463 386 463 0.97 # 23696 # 25255 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 2_25 - 412 ArsA_ATPase PF02374.10 305 0.00033 12.7 0.0 1 1 7.9e-06 0.00082 11.4 0.0 4 136 123 265 120 267 0.70 # 27269 # 28504 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 4_1 - 254 PhoH PF02562.11 205 1.1e-07 24.2 0.1 1 1 7.7e-09 4e-07 22.4 0.0 11 48 88 125 77 136 0.80 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_42 - 419 PhoH PF02562.11 205 0.00031 12.9 0.0 1 2 5.5e-05 0.0029 9.8 0.0 31 138 36 136 12 146 0.65 # 29580 # 30836 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_42 - 419 PhoH PF02562.11 205 0.00031 12.9 0.0 2 2 0.078 4.1 -0.5 0.0 65 106 351 392 340 396 0.78 # 29580 # 30836 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 4_1 - 254 AFG1_ATPase PF03969.11 362 7.1e-05 14.6 0.2 1 1 2.6e-06 0.00027 12.7 0.2 63 216 97 248 37 253 0.72 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_37 - 213 T2SE PF00437.15 272 0.00017 13.5 0.1 1 1 2.9e-06 0.0003 12.7 0.1 116 164 37 85 4 109 0.79 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_25 - 412 Methyltransf_24 PF13578.1 106 0.00028 14.7 0.1 1 1 1.9e-05 0.002 12.0 0.1 4 79 130 265 127 281 0.63 # 27269 # 28504 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 1_37 - 213 Zeta_toxin PF06414.7 201 7.5e-06 18.1 0.0 1 2 2.2e-07 2.3e-05 16.5 0.0 14 52 47 85 37 106 0.80 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 Zeta_toxin PF06414.7 201 7.5e-06 18.1 0.0 2 2 0.062 6.4 -1.3 0.0 170 185 155 170 122 201 0.61 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_22 - 639 SMC_N PF02463.14 220 3.8e-15 48.6 0.4 1 1 1.3e-16 6.6e-15 47.8 0.4 32 200 41 618 3 635 0.91 # 15408 # 17324 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_37 - 213 SMC_N PF02463.14 220 3e-05 16.3 0.6 1 2 0.00081 0.042 6.0 0.1 25 41 50 66 37 73 0.81 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 SMC_N PF02463.14 220 3e-05 16.3 0.6 2 2 9.8e-05 0.0051 9.0 0.0 135 204 117 192 67 208 0.64 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_25 - 412 VirC1 PF07015.6 231 0.00076 11.5 0.0 1 2 0.015 1.6 0.7 0.0 4 26 122 144 120 151 0.83 # 27269 # 28504 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_25 - 412 VirC1 PF07015.6 231 0.00076 11.5 0.0 2 2 8.4e-05 0.0088 8.1 0.0 84 154 256 332 243 370 0.69 # 27269 # 28504 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_25 - 412 Fer4_NifH PF00142.13 273 6.6e-06 18.4 0.0 1 1 1.2e-07 1.2e-05 17.5 0.0 7 71 127 196 122 205 0.79 # 27269 # 28504 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_28 - 464 Arch_ATPase PF01637.13 234 1.4e-12 40.7 0.0 1 1 5.8e-14 2e-12 40.2 0.0 1 230 31 266 31 270 0.63 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 Arch_ATPase PF01637.13 234 0.00026 13.7 0.0 1 1 9.1e-06 0.00032 13.4 0.0 18 68 47 97 41 177 0.84 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 254 Arch_ATPase PF01637.13 234 0.00093 11.9 0.1 1 1 0.0001 0.0035 10.0 0.0 8 37 84 113 81 134 0.79 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 2_28 - 464 AAA_16 PF13191.1 185 3.9e-17 55.8 0.0 1 1 1.9e-18 6.7e-17 55.0 0.0 1 179 30 190 30 198 0.80 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 AAA_16 PF13191.1 185 1.9e-08 27.4 0.0 1 1 7.7e-10 2.7e-08 27.0 0.0 12 87 38 107 29 182 0.76 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 254 AAA_16 PF13191.1 185 6.5e-05 15.9 0.7 1 1 8.6e-06 0.0003 13.8 0.1 16 41 91 113 79 144 0.78 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_22 - 639 AAA_23 PF13476.1 202 6.4e-19 62.0 0.0 1 1 6.5e-20 6.7e-18 58.7 0.0 1 177 5 245 5 510 0.78 # 15408 # 17324 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_37 - 213 AAA_18 PF13238.1 129 2.1e-06 21.1 0.0 1 1 3.6e-08 3.8e-06 20.2 0.0 1 39 52 90 52 106 0.77 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_25 - 412 CbiA PF01656.18 195 4.6e-23 74.6 0.0 1 1 8.2e-25 8.6e-23 73.7 0.0 1 158 122 329 122 361 0.69 # 27269 # 28504 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 1_9 - 359 KaiC PF06745.8 227 3.7e-05 15.9 0.0 1 1 1.2e-06 6.4e-05 15.1 0.0 13 46 41 78 20 98 0.76 # 5046 # 6122 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 2_28 - 464 KaiC PF06745.8 227 0.00013 14.1 0.0 1 1 5e-06 0.00026 13.1 0.0 19 143 49 188 46 193 0.69 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 AAA_14 PF13173.1 128 1.4e-07 24.4 0.0 1 2 7.3e-06 0.00025 13.9 0.0 3 48 50 96 48 117 0.75 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 AAA_14 PF13173.1 128 1.4e-07 24.4 0.0 2 2 0.00049 0.017 8.0 0.0 50 97 150 202 127 222 0.80 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_1 - 254 AAA_14 PF13173.1 128 1.2e-06 21.4 0.0 1 1 6.4e-08 2.2e-06 20.6 0.0 2 96 96 197 95 215 0.67 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_37 - 213 AAA_14 PF13173.1 128 0.00045 13.1 0.0 1 1 3.4e-05 0.0012 11.7 0.0 2 44 49 90 48 122 0.74 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 AAA_29 PF13555.1 62 8.9e-08 24.6 0.0 1 1 6.2e-09 2.1e-07 23.4 0.0 8 40 35 66 32 71 0.91 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_22 - 639 AAA_29 PF13555.1 62 8e-05 15.1 0.1 1 1 1.4e-05 0.00049 12.6 0.0 31 51 41 61 4 66 0.81 # 15408 # 17324 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 4_1 - 254 AAA_29 PF13555.1 62 0.00076 12.0 0.0 1 1 4.2e-05 0.0014 11.1 0.0 19 59 92 133 83 135 0.72 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 2_28 - 464 AAA PF00004.24 132 3e-08 26.9 0.0 1 1 2.3e-09 1.2e-07 25.0 0.0 2 114 53 208 52 226 0.67 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_1 - 254 AAA PF00004.24 132 1.8e-07 24.4 0.0 1 1 6e-09 3.1e-07 23.6 0.0 1 74 99 174 99 208 0.77 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 4_1 - 254 Bac_DnaA PF00308.13 219 1.1e-09 31.2 0.0 1 1 3e-11 1.6e-09 30.7 0.0 37 136 99 196 69 201 0.85 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 2_28 - 464 Bac_DnaA PF00308.13 219 2e-05 17.2 0.0 1 2 1.4e-05 0.00075 12.1 0.0 37 82 52 97 40 113 0.75 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 Bac_DnaA PF00308.13 219 2e-05 17.2 0.0 2 2 0.012 0.64 2.5 0.0 79 131 141 193 118 260 0.68 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 Sigma54_activat PF00158.21 168 7.4e-05 15.2 0.0 1 1 4.1e-06 0.00014 14.3 0.0 11 67 37 96 33 100 0.79 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_1 - 254 Sigma54_activat PF00158.21 168 0.00013 14.4 0.1 1 1 2.3e-05 0.00081 11.8 0.1 18 53 92 127 76 192 0.71 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_37 - 213 Sigma54_activat PF00158.21 168 0.00014 14.4 0.1 1 2 2.9e-05 0.00099 11.6 0.0 16 51 43 78 30 96 0.78 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 Sigma54_activat PF00158.21 168 0.00014 14.4 0.1 2 2 0.078 2.7 0.4 0.1 131 150 174 194 155 208 0.67 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 DUF258 PF03193.11 161 1.2e-05 17.6 0.0 1 1 3.8e-07 2e-05 16.8 0.0 25 85 38 111 13 119 0.76 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 254 DUF258 PF03193.11 161 1.3e-05 17.4 0.0 1 1 3.7e-07 1.9e-05 16.8 0.0 21 78 82 151 64 186 0.71 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 2_25 - 412 AAA_31 PF13614.1 157 1.2e-07 24.7 0.0 1 2 1.6e-05 0.0017 11.3 0.0 2 90 121 214 120 229 0.80 # 27269 # 28504 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_25 - 412 AAA_31 PF13614.1 157 1.2e-07 24.7 0.0 2 2 2.7e-05 0.0028 10.5 0.0 109 148 247 285 231 290 0.87 # 27269 # 28504 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_28 - 464 NTPase_1 PF03266.10 168 1.6e-05 17.6 0.1 1 2 0.00011 0.0038 9.9 0.0 1 26 51 76 51 84 0.91 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 NTPase_1 PF03266.10 168 1.6e-05 17.6 0.1 2 2 0.0027 0.094 5.4 0.0 62 103 129 168 114 197 0.82 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 NTPase_1 PF03266.10 168 4.2e-05 16.3 0.1 1 1 7.1e-06 0.00025 13.8 0.0 2 31 52 81 51 102 0.95 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 254 NTPase_1 PF03266.10 168 0.00023 13.8 0.1 1 2 0.0047 0.16 4.6 0.1 2 30 99 127 98 147 0.83 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 4_1 - 254 NTPase_1 PF03266.10 168 0.00023 13.8 0.1 2 2 0.00071 0.025 7.3 0.0 88 112 151 175 138 198 0.72 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_37 - 213 AAA_33 PF13671.1 143 0.00027 13.8 0.1 1 1 4.3e-06 0.00044 13.1 0.1 1 33 51 94 51 208 0.70 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 KTI12 PF08433.5 270 4.8e-07 22.2 0.1 1 2 1e-07 1.1e-05 17.7 0.0 4 41 52 89 50 103 0.89 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 KTI12 PF08433.5 270 4.8e-07 22.2 0.1 2 2 0.0043 0.45 2.6 0.0 187 218 149 180 136 209 0.65 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_30 - 226 Methyltransf_26 PF13659.1 117 3.3e-13 42.7 0.1 1 2 1.9e-08 2e-06 20.8 0.0 53 114 3 71 2 74 0.77 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_30 - 226 Methyltransf_26 PF13659.1 117 3.3e-13 42.7 0.1 2 2 4e-08 4.2e-06 19.8 0.0 4 44 167 206 164 220 0.83 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_28 - 464 AAA_30 PF13604.1 196 3.2e-05 16.5 0.0 1 1 2.6e-06 0.00014 14.5 0.0 4 53 35 84 34 181 0.65 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 AAA_30 PF13604.1 196 4.9e-05 15.9 0.8 1 1 3.9e-06 0.0002 13.9 0.7 17 50 48 81 42 183 0.83 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 FtsK_SpoIIIE PF01580.13 205 0.00024 13.6 0.0 1 2 7.9e-06 0.00082 11.8 0.0 20 58 30 69 17 73 0.81 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 FtsK_SpoIIIE PF01580.13 205 0.00024 13.6 0.0 2 2 0.057 5.9 -0.8 0.0 175 200 159 184 90 197 0.72 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_28 - 464 AAA_35 PF14516.1 331 8.9e-08 24.0 0.0 1 2 7.5e-06 0.00078 11.0 0.0 22 141 40 174 31 192 0.63 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 AAA_35 PF14516.1 331 8.9e-08 24.0 0.0 2 2 1.7e-05 0.0017 9.9 0.0 214 292 245 346 230 358 0.84 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_9 - 359 RecA PF00154.16 323 1.6e-47 155.0 0.0 1 1 2.5e-49 2.6e-47 154.3 0.0 22 281 16 306 9 341 0.80 # 5046 # 6122 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 1_37 - 213 ABC_tran PF00005.22 137 1.4e-14 47.6 0.1 1 1 1.4e-13 3.7e-12 39.7 0.1 1 134 39 152 39 155 0.83 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_22 - 639 ABC_tran PF00005.22 137 3.4e-07 23.6 3.5 1 2 0.0007 0.018 8.3 0.1 19 32 41 54 40 78 0.87 # 15408 # 17324 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_22 - 639 ABC_tran PF00005.22 137 3.4e-07 23.6 3.5 2 2 7.6e-06 0.0002 14.7 0.5 79 126 482 565 251 569 0.82 # 15408 # 17324 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 4_1 - 254 ABC_tran PF00005.22 137 0.00015 15.1 0.3 1 1 4.6e-05 0.0012 12.1 0.0 8 30 93 115 87 130 0.86 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 2_28 - 464 ABC_tran PF00005.22 137 0.00048 13.4 0.0 1 1 4.5e-05 0.0012 12.2 0.0 9 52 47 104 38 198 0.52 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 ATP-synt_ab PF00006.20 215 0.00025 13.5 0.0 1 1 9e-06 0.00047 12.6 0.0 15 70 49 105 45 165 0.81 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 ATP-synt_ab PF00006.20 215 0.00057 12.4 0.1 1 1 1.7e-05 0.00088 11.7 0.1 13 50 47 84 42 188 0.72 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_30 - 226 Cons_hypoth95 PF03602.10 183 9.2e-06 18.1 0.0 1 2 0.00022 0.022 7.1 0.0 112 156 18 64 2 82 0.65 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_30 - 226 Cons_hypoth95 PF03602.10 183 9.2e-06 18.1 0.0 2 2 5e-05 0.0051 9.1 0.0 41 62 162 183 145 213 0.80 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_28 - 464 RuvB_N PF05496.7 234 7.2e-05 14.8 0.0 1 2 4.3e-05 0.0022 10.0 0.0 51 75 50 74 32 104 0.85 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 RuvB_N PF05496.7 234 7.2e-05 14.8 0.0 2 2 0.018 0.96 1.3 0.0 33 61 305 333 293 366 0.78 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_1 - 254 RuvB_N PF05496.7 234 0.00037 12.5 0.0 1 1 1.2e-05 0.00064 11.7 0.0 50 119 96 176 86 184 0.65 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 4_1 - 254 AAA_19 PF13245.1 76 0.00043 13.0 0.0 1 1 2e-05 0.0011 11.8 0.0 10 37 97 123 90 148 0.81 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_42 - 419 AAA_19 PF13245.1 76 0.00076 12.2 0.0 1 1 3e-05 0.0016 11.2 0.0 22 58 36 70 20 94 0.79 # 29580 # 30836 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_28 - 464 Helicase_RecD PF05127.9 177 4.3e-05 16.2 0.0 1 1 7.2e-07 7.5e-05 15.4 0.0 2 98 54 168 53 175 0.69 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 AAA_10 PF12846.2 304 2.4e-06 20.1 0.4 1 2 3.1e-06 0.00011 14.7 0.0 6 47 54 97 51 107 0.82 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 AAA_10 PF12846.2 304 2.4e-06 20.1 0.4 2 2 0.0057 0.2 4.0 0.1 216 260 140 184 95 192 0.78 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 254 AAA_10 PF12846.2 304 7.7e-06 18.4 0.6 1 3 0.089 3.1 0.0 0.0 127 169 32 76 8 89 0.68 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 4_1 - 254 AAA_10 PF12846.2 304 7.7e-06 18.4 0.6 2 3 2.8e-06 9.5e-05 14.8 0.1 1 33 96 128 96 165 0.89 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 4_1 - 254 AAA_10 PF12846.2 304 7.7e-06 18.4 0.6 3 3 0.07 2.4 0.4 0.0 202 247 136 186 128 196 0.68 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_22 - 639 AAA_10 PF12846.2 304 0.0098 8.2 6.5 1 2 0.0013 0.044 6.1 1.3 9 24 41 59 39 281 0.88 # 15408 # 17324 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_22 - 639 AAA_10 PF12846.2 304 0.0098 8.2 6.5 2 2 0.0041 0.14 4.4 0.3 97 262 465 617 380 629 0.75 # 15408 # 17324 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_22 - 639 SbcCD_C PF13558.1 90 1.1e-07 24.7 0.1 1 1 2.6e-09 2.7e-07 23.5 0.1 12 89 532 601 524 602 0.86 # 15408 # 17324 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_34 - 520 ResIII PF04851.10 184 8.9e-18 57.7 0.0 1 1 3.2e-19 1.6e-17 56.8 0.0 26 183 112 268 97 269 0.82 # 23696 # 25255 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 4_1 - 254 ResIII PF04851.10 184 0.00036 13.3 0.0 1 2 0.00013 0.0069 9.2 0.0 8 50 83 121 44 129 0.78 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 4_1 - 254 ResIII PF04851.10 184 0.00036 13.3 0.0 2 2 0.015 0.77 2.5 0.0 112 163 125 175 119 197 0.72 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_55 - 1526 RRF PF01765.14 165 0.029 6.8 13.0 1 2 0.0045 0.46 2.9 0.0 98 151 270 323 265 327 0.94 # 39097 # 43674 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.567 1_55 - 1526 RRF PF01765.14 165 0.029 6.8 13.0 2 2 4.9e-05 0.0051 9.2 2.2 108 152 748 793 723 804 0.71 # 39097 # 43674 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.567 2_28 - 464 DUF2075 PF09848.4 352 3.1e-05 16.0 0.0 1 1 1.7e-06 8.8e-05 14.5 0.0 3 133 51 208 49 245 0.67 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 DUF2075 PF09848.4 352 6.4e-05 15.0 0.2 1 1 3e-06 0.00015 13.7 0.0 3 28 51 76 49 109 0.80 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_34 - 520 DEAD PF00270.24 169 1.7e-13 43.3 0.1 1 2 3.1e-13 1.1e-11 37.5 0.0 2 163 99 268 98 275 0.73 # 23696 # 25255 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 1_34 - 520 DEAD PF00270.24 169 1.7e-13 43.3 0.1 2 2 0.014 0.5 2.8 0.0 64 102 384 425 376 428 0.75 # 23696 # 25255 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 2_28 - 464 DEAD PF00270.24 169 2.7e-06 19.9 0.1 1 1 2.7e-07 9.4e-06 18.2 0.1 2 157 35 198 34 201 0.65 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_42 - 419 DEAD PF00270.24 169 0.00022 13.7 0.0 1 1 2.2e-05 0.00078 11.9 0.0 25 132 35 130 14 154 0.76 # 29580 # 30836 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_28 - 464 DUF815 PF05673.8 250 5.2e-06 18.5 0.0 1 1 1.9e-07 9.8e-06 17.6 0.0 44 103 40 99 25 106 0.89 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 DUF815 PF05673.8 250 1.1e-05 17.4 0.0 1 1 3.3e-07 1.7e-05 16.8 0.0 32 103 30 99 7 106 0.83 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 Sigma54_activ_2 PF14532.1 138 1.5e-05 18.0 0.0 1 1 2.3e-07 2.4e-05 17.4 0.0 10 95 38 143 33 192 0.72 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_42 - 419 Terminase_3 PF04466.8 387 7.9e-08 24.6 0.0 1 2 2.1e-09 2.1e-07 23.2 0.0 2 123 24 143 23 161 0.91 # 29580 # 30836 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_42 - 419 Terminase_3 PF04466.8 387 7.9e-08 24.6 0.0 2 2 0.08 8.3 -1.8 0.0 343 385 363 402 340 404 0.64 # 29580 # 30836 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_28 - 464 AAA_32 PF13654.1 509 0.00026 12.7 0.0 1 1 4.1e-06 0.00043 11.9 0.0 8 56 29 75 23 82 0.82 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_30 - 226 MethyltransfD12 PF02086.10 260 0.00027 13.4 0.0 1 2 0.013 1.4 1.2 0.0 176 188 19 31 12 90 0.83 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_30 - 226 MethyltransfD12 PF02086.10 260 0.00027 13.4 0.0 2 2 2.8e-05 0.0029 10.0 0.0 20 46 163 189 148 197 0.79 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 1_37 - 213 ArgK PF03308.11 267 1.7e-05 16.7 0.0 1 1 2.7e-07 2.8e-05 15.9 0.0 26 63 46 83 15 85 0.87 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 PIF1 PF05970.9 364 4.1e-05 15.6 0.0 1 1 6.3e-07 6.6e-05 14.9 0.0 18 55 45 82 31 85 0.86 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_28 - 464 RNA_helicase PF00910.17 107 4.2e-05 16.7 0.0 1 2 5e-05 0.0026 10.9 0.0 1 26 52 76 52 106 0.80 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 RNA_helicase PF00910.17 107 4.2e-05 16.7 0.0 2 2 0.016 0.82 2.9 0.0 45 65 156 176 137 195 0.82 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 RNA_helicase PF00910.17 107 7.5e-05 15.9 0.1 1 1 8.1e-06 0.00042 13.5 0.1 1 26 52 77 52 107 0.76 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 UPF0079 PF02367.12 123 3.5e-06 19.7 0.0 1 1 6.3e-08 6.6e-06 18.8 0.0 9 47 43 82 36 96 0.85 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_42 - 419 Terminase_GpA PF05876.7 557 2.8e-05 15.5 0.0 1 1 4.5e-07 4.7e-05 14.8 0.0 34 149 25 132 10 136 0.78 # 29580 # 30836 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_28 - 464 AAA_24 PF13479.1 213 5.7e-06 19.0 0.1 1 1 1.5e-07 1.6e-05 17.5 0.1 6 33 52 87 49 172 0.80 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 NACHT PF05729.7 166 1.2e-05 18.0 0.0 1 2 8.6e-06 0.00045 12.9 0.0 1 28 50 77 50 103 0.88 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_28 - 464 NACHT PF05729.7 166 1.2e-05 18.0 0.0 2 2 0.011 0.57 2.8 0.0 79 112 158 188 123 220 0.79 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 NACHT PF05729.7 166 2.6e-05 16.9 0.0 1 1 1.1e-06 5.8e-05 15.8 0.0 2 38 51 88 50 112 0.79 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_9 - 359 AAA_25 PF13481.1 194 4.2e-07 22.5 0.0 1 1 9.3e-08 1.9e-06 20.3 0.0 13 157 27 157 18 216 0.68 # 5046 # 6122 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 4_1 - 254 AAA_25 PF13481.1 194 2.6e-05 16.7 0.0 1 1 2e-06 4.1e-05 16.0 0.0 22 58 84 121 65 177 0.79 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_22 - 639 AAA_25 PF13481.1 194 5.9e-05 15.5 0.3 1 1 1.6e-05 0.00033 13.1 0.0 39 139 39 137 29 143 0.71 # 15408 # 17324 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_37 - 213 AAA_25 PF13481.1 194 0.0002 13.8 0.1 1 2 0.00013 0.0026 10.1 0.0 18 50 30 66 15 88 0.76 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 AAA_25 PF13481.1 194 0.0002 13.8 0.1 2 2 0.058 1.2 1.4 0.1 165 185 162 182 144 186 0.80 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_28 - 464 AAA_25 PF13481.1 194 0.00066 12.0 0.1 1 1 0.00017 0.0035 9.7 0.1 31 59 47 74 24 188 0.73 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_30 - 226 Methyltransf_15 PF09445.5 164 0.0011 11.5 0.0 1 2 0.035 3.6 0.1 0.0 53 79 4 29 2 33 0.90 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_30 - 226 Methyltransf_15 PF09445.5 164 0.0011 11.5 0.0 2 2 7.1e-05 0.0074 8.8 0.0 3 31 166 194 164 207 0.86 # 32111 # 32788 # 1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 1_34 - 520 SNF2_N PF00176.18 299 2.2e-05 16.3 0.0 1 1 3.5e-07 3.6e-05 15.6 0.0 106 182 186 277 169 285 0.81 # 23696 # 25255 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 4_1 - 254 AAA_28 PF13521.1 163 0.0011 11.8 1.5 1 2 0.087 9 -0.8 0.1 85 110 30 57 15 75 0.65 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 4_1 - 254 AAA_28 PF13521.1 163 0.0011 11.8 1.5 2 2 2.8e-05 0.0029 10.5 0.2 1 43 98 145 98 166 0.70 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_9 - 359 Rad51 PF08423.6 256 4.3e-05 15.4 0.0 1 2 5.7e-06 0.00059 11.7 0.0 32 84 45 91 27 135 0.86 # 5046 # 6122 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 1_9 - 359 Rad51 PF08423.6 256 4.3e-05 15.4 0.0 2 2 0.0078 0.81 1.4 0.0 169 207 195 230 161 262 0.78 # 5046 # 6122 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 2_4 - 412 AAA_5 PF07728.9 139 1.3e-17 56.8 0.0 1 1 6.7e-19 2.3e-17 56.0 0.0 4 126 173 293 172 309 0.92 # 4472 # 5707 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.527 2_28 - 464 AAA_5 PF07728.9 139 3.6e-06 19.7 0.0 1 1 9.3e-07 3.2e-05 16.6 0.0 1 47 51 100 51 194 0.73 # 29857 # 31248 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_1 - 254 AAA_5 PF07728.9 139 2.9e-05 16.8 0.3 1 1 1e-05 0.00036 13.2 0.2 1 74 98 167 98 174 0.72 # 68 # 829 # -1 # ID=4_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.505 1_37 - 213 APS_kinase PF01583.15 157 2.7e-07 23.3 0.0 1 1 5.1e-09 5.3e-07 22.4 0.0 1 40 48 87 48 105 0.84 # 26683 # 27321 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/15eae4a3-afaa-480b-95a3-f2ea2a6e21d7 # Target file: checkm_output/bins/pm1367/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1367/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/15eae4a3-afaa-480b-95a3-f2ea2a6e21d7 checkm_output/bins/pm1367/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:56:06 2020 # [ok]