# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_15 - 144 Mg_chelatase PF01078.16 207 0.00025 13.1 0.0 1 1 3.9e-06 0.00037 12.5 0.0 24 42 99 117 84 127 0.90 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 IstB_IS21 PF01695.12 178 5.4e-70 227.2 0.0 1 1 2.3e-71 1e-69 226.3 0.0 11 178 65 234 61 234 0.97 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 IstB_IS21 PF01695.12 178 2.5e-34 111.0 0.2 1 2 0.027 1.3 1.2 0.2 83 111 4 32 2 33 0.89 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_15 - 144 IstB_IS21 PF01695.12 178 2.5e-34 111.0 0.2 2 2 5.8e-35 2.7e-33 107.6 0.0 1 84 51 134 51 141 0.96 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_29 - 389 MipZ PF09140.6 261 1.8e-06 20.0 0.1 1 2 8.4e-08 7.8e-06 17.9 0.0 3 47 109 153 107 168 0.90 # 18334 # 19500 # -1 # ID=3_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 3_29 - 389 MipZ PF09140.6 261 1.8e-06 20.0 0.1 2 2 0.043 4 -0.8 0.0 88 128 224 264 211 274 0.76 # 18334 # 19500 # -1 # ID=3_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 3_2 - 153 UvrD_C_2 PF13538.1 104 3.1e-05 16.9 0.0 1 1 4.8e-07 4.5e-05 16.4 0.0 2 80 58 140 57 152 0.71 # 321 # 779 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.553 3_18 - 259 AAA_22 PF13401.1 131 2.1e-06 20.8 0.1 1 2 4.1e-05 0.0019 11.1 0.0 5 21 102 118 98 134 0.83 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 AAA_22 PF13401.1 131 2.1e-06 20.8 0.1 2 2 0.00078 0.036 7.0 0.0 88 103 153 180 128 202 0.66 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 AAA_22 PF13401.1 131 0.00031 13.7 0.0 1 1 1.5e-05 0.00071 12.5 0.0 6 24 99 117 94 138 0.83 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_15 - 144 AAA_17 PF13207.1 121 1.2e-05 18.9 0.0 1 2 0.025 2.3 1.9 0.0 20 53 8 46 4 91 0.62 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_15 - 144 AAA_17 PF13207.1 121 1.2e-05 18.9 0.0 2 2 1.8e-06 0.00017 15.3 0.0 2 20 100 118 99 136 0.80 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_29 - 389 ArsA_ATPase PF02374.10 305 1.6e-06 20.1 0.0 1 2 2.3e-06 0.00011 14.1 0.0 9 40 115 147 109 154 0.90 # 18334 # 19500 # -1 # ID=3_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 3_29 - 389 ArsA_ATPase PF02374.10 305 1.6e-06 20.1 0.0 2 2 0.0044 0.2 3.4 0.0 125 136 233 244 223 252 0.89 # 18334 # 19500 # -1 # ID=3_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 3_15 - 144 ArsA_ATPase PF02374.10 305 7.1e-05 14.7 0.0 1 1 2.4e-06 0.00011 14.1 0.0 5 34 101 130 97 133 0.87 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 PhoH PF02562.11 205 1.6e-07 23.6 0.0 1 1 8e-09 3.7e-07 22.3 0.0 11 48 93 130 82 141 0.80 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 PhoH PF02562.11 205 2e-06 20.0 0.0 1 1 6.2e-08 2.9e-06 19.4 0.0 16 47 94 125 80 141 0.85 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 AFG1_ATPase PF03969.11 362 0.00011 13.9 0.1 1 1 5.3e-06 0.00049 11.7 0.1 65 216 104 253 78 258 0.74 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_29 - 389 VirC1 PF07015.6 231 9.2e-06 17.6 0.1 1 2 2.5e-05 0.0023 9.8 0.0 4 42 109 147 107 153 0.91 # 18334 # 19500 # -1 # ID=3_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 3_29 - 389 VirC1 PF07015.6 231 9.2e-06 17.6 0.1 2 2 0.00054 0.05 5.4 0.0 100 139 251 290 218 321 0.72 # 18334 # 19500 # -1 # ID=3_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 3_18 - 259 Arch_ATPase PF01637.13 234 0.00085 11.8 0.1 1 2 3.4e-05 0.0032 10.0 0.0 8 37 89 118 86 139 0.79 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 Arch_ATPase PF01637.13 234 0.00085 11.8 0.1 2 2 0.07 6.5 -0.9 0.0 121 150 166 191 143 202 0.68 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 AAA_16 PF13191.1 185 4.2e-07 22.9 0.1 1 2 0.0052 0.24 4.1 0.0 122 173 20 88 2 96 0.61 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_15 - 144 AAA_16 PF13191.1 185 4.2e-07 22.9 0.1 2 2 4.7e-07 2.2e-05 17.3 0.0 23 61 96 134 87 139 0.81 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 AAA_16 PF13191.1 185 6.7e-05 15.7 1.2 1 1 6.5e-06 0.0003 13.6 0.1 16 41 96 118 84 138 0.77 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 AAA_18 PF13238.1 129 0.00014 15.0 0.1 1 1 3.6e-06 0.00034 13.8 0.0 1 19 100 118 100 139 0.79 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_29 - 389 CbiA PF01656.18 195 6e-33 106.7 0.0 1 1 1.8e-34 8.3e-33 106.2 0.0 1 188 109 333 109 340 0.76 # 18334 # 19500 # -1 # ID=3_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 3_15 - 144 CbiA PF01656.18 195 3.2e-05 16.2 0.0 1 1 1.3e-06 6.3e-05 15.2 0.0 9 31 107 129 100 132 0.94 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 AAA_14 PF13173.1 128 1e-06 21.5 0.0 1 1 2.2e-08 2.1e-06 20.5 0.0 2 96 101 202 100 221 0.67 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 AAA_29 PF13555.1 62 0.00059 12.2 0.0 1 1 1.4e-05 0.0013 11.1 0.0 19 59 97 138 88 140 0.72 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 AAA PF00004.24 132 1.7e-07 24.4 0.0 1 1 6.3e-09 2.9e-07 23.6 0.0 1 74 104 179 104 213 0.77 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 AAA PF00004.24 132 6.9e-06 19.1 0.1 1 1 6.6e-07 3.1e-05 17.0 0.1 1 21 100 120 100 138 0.82 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 Bac_DnaA PF00308.13 219 9.6e-10 31.2 0.0 1 1 3.1e-11 1.5e-09 30.6 0.0 37 136 104 201 74 206 0.85 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 Bac_DnaA PF00308.13 219 0.00076 11.9 0.0 1 1 2.8e-05 0.0013 11.2 0.0 34 68 97 129 71 136 0.77 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 Sigma54_activat PF00158.21 168 0.00014 14.2 0.1 1 1 8.1e-06 0.00075 11.8 0.1 18 53 97 132 81 198 0.72 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 DUF258 PF03193.11 161 1.2e-05 17.3 0.0 1 1 1.9e-07 1.8e-05 16.8 0.0 21 78 87 156 69 191 0.71 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_29 - 389 AAA_31 PF13614.1 157 2.9e-06 20.1 0.1 1 2 1.6e-05 0.00074 12.3 0.0 2 49 108 155 107 178 0.86 # 18334 # 19500 # -1 # ID=3_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 3_29 - 389 AAA_31 PF13614.1 157 2.9e-06 20.1 0.1 2 2 0.002 0.091 5.5 0.1 116 151 229 267 217 271 0.79 # 18334 # 19500 # -1 # ID=3_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.440 3_15 - 144 AAA_31 PF13614.1 157 0.00022 14.0 0.0 1 1 1.5e-05 0.0007 12.3 0.0 10 36 106 132 85 136 0.93 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 NTPase_1 PF03266.10 168 0.00019 14.0 0.1 1 2 0.0016 0.15 4.5 0.1 2 30 104 132 103 152 0.83 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 NTPase_1 PF03266.10 168 0.00019 14.0 0.1 2 2 0.00024 0.023 7.2 0.0 88 112 156 180 143 203 0.72 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 AAA_33 PF13671.1 143 0.00024 13.8 0.3 1 2 0.07 6.5 -0.6 0.0 44 44 39 39 4 77 0.46 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_15 - 144 AAA_33 PF13671.1 143 0.00024 13.8 0.3 2 2 8.7e-06 0.00081 12.1 0.1 2 19 100 117 100 129 0.85 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 ABC_tran PF00005.22 137 0.00015 14.9 0.3 1 2 1.2e-05 0.0011 12.1 0.0 8 30 98 120 92 135 0.86 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 ABC_tran PF00005.22 137 0.00015 14.9 0.3 2 2 0.051 4.7 0.3 0.0 107 134 142 171 125 173 0.74 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_5 - 249 ATP-synt_ab PF00006.20 215 9.2e-61 197.8 0.0 1 1 2.6e-62 1.2e-60 197.4 0.0 47 215 3 167 1 167 0.99 # 2815 # 3561 # -1 # ID=2_5;partial=00;start_type=GTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.515 2_6 - 188 ATP-synt_ab PF00006.20 215 2.6e-08 26.4 0.3 1 1 7.7e-10 3.6e-08 25.9 0.3 2 33 149 180 148 185 0.91 # 3570 # 4133 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.500 3_15 - 144 RuvB_N PF05496.7 234 6.9e-05 14.7 0.0 1 1 1.9e-06 9e-05 14.4 0.0 48 70 95 117 68 137 0.85 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 RuvB_N PF05496.7 234 0.00035 12.4 0.0 1 1 1.3e-05 0.0006 11.7 0.0 50 119 101 181 92 189 0.65 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 AAA_19 PF13245.1 76 9.7e-08 24.5 0.2 1 1 8.3e-09 3.9e-07 22.6 0.1 13 48 100 131 87 133 0.88 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 AAA_19 PF13245.1 76 0.0004 13.0 0.0 1 1 2.1e-05 0.00098 11.7 0.0 10 37 102 128 95 153 0.81 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 AAA_10 PF12846.2 304 1.9e-05 17.0 0.1 1 2 1.9e-06 8.8e-05 14.8 0.1 1 33 101 133 101 170 0.89 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 AAA_10 PF12846.2 304 1.9e-05 17.0 0.1 2 2 0.048 2.2 0.3 0.0 202 247 141 191 133 201 0.68 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 AAA_10 PF12846.2 304 0.00023 13.4 0.0 1 1 8.4e-06 0.00039 12.7 0.0 3 35 99 131 98 139 0.87 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 ResIII PF04851.10 184 0.00037 13.1 0.0 1 2 7e-05 0.0065 9.1 0.0 8 50 88 126 47 134 0.80 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 ResIII PF04851.10 184 0.00037 13.1 0.0 2 2 0.0083 0.77 2.3 0.0 112 163 130 180 127 203 0.71 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 ArgK PF03308.11 267 0.00014 13.5 0.0 1 1 2.2e-06 0.00021 12.9 0.0 28 60 96 128 80 133 0.86 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_15 - 144 AAA_24 PF13479.1 213 0.00048 12.5 0.0 1 1 1.5e-05 0.00072 12.0 0.0 5 23 99 117 95 129 0.86 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 AAA_24 PF13479.1 213 0.00069 12.0 0.1 1 1 7e-05 0.0032 9.8 0.0 3 21 101 119 99 126 0.84 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 NACHT PF05729.7 166 0.0002 13.9 0.0 1 1 4.8e-06 0.00045 12.7 0.0 3 27 100 124 98 137 0.84 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_15 - 144 AAA_25 PF13481.1 194 2.8e-07 22.9 0.0 1 1 8.4e-09 3.9e-07 22.4 0.0 22 64 81 129 57 138 0.76 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 AAA_25 PF13481.1 194 2e-05 16.8 0.0 1 1 8.5e-07 3.9e-05 15.9 0.0 23 58 90 126 71 182 0.80 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 AAA_28 PF13521.1 163 0.00018 14.3 0.0 1 2 0.098 4.6 -0.0 0.0 98 125 22 49 6 76 0.55 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_15 - 144 AAA_28 PF13521.1 163 0.00018 14.3 0.0 2 2 1.9e-05 0.00088 12.1 0.0 2 25 100 127 99 136 0.76 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 AAA_28 PF13521.1 163 0.00035 13.3 0.5 1 2 0.096 4.5 0.0 0.0 132 160 34 61 25 62 0.81 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 AAA_28 PF13521.1 163 0.00035 13.3 0.5 2 2 6.4e-05 0.003 10.3 0.2 1 43 103 150 103 166 0.69 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_15 - 144 AAA_5 PF07728.9 139 3.9e-06 19.5 0.1 1 2 0.089 4.2 -0.1 0.0 91 126 13 49 3 61 0.52 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_15 - 144 AAA_5 PF07728.9 139 3.9e-06 19.5 0.1 2 2 4.1e-07 1.9e-05 17.2 0.0 1 37 99 138 99 140 0.81 # 9824 # 10255 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.569 3_18 - 259 AAA_5 PF07728.9 139 8.6e-06 18.3 0.3 1 2 0.078 3.6 0.1 0.0 83 109 41 67 35 96 0.73 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 3_18 - 259 AAA_5 PF07728.9 139 8.6e-06 18.3 0.3 2 2 7.2e-06 0.00033 13.2 0.2 1 74 103 172 103 179 0.72 # 12289 # 13065 # 1 # ID=3_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/19db1c79-cf09-4e02-b4df-08b672e09ad6 # Target file: checkm_output/bins/pm1366/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1366/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/19db1c79-cf09-4e02-b4df-08b672e09ad6 checkm_output/bins/pm1366/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:56:02 2020 # [ok]