# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_123 - 142 Mg_chelatase PF01078.16 207 5.2e-05 16.4 0.0 1 1 1.2e-06 0.00012 15.2 0.0 12 45 20 53 9 76 0.84 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_110 - 488 Mg_chelatase PF01078.16 207 0.0017 11.5 0.1 1 1 3.3e-05 0.0035 10.5 0.1 2 47 216 267 215 281 0.77 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_140 - 372 ATP_bind_3 PF01171.15 182 0.00044 13.7 0.0 1 2 6.8e-05 0.014 8.8 0.0 1 58 52 109 52 125 0.77 # 101004 # 102119 # 1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_140 - 372 ATP_bind_3 PF01171.15 182 0.00044 13.7 0.0 2 2 0.0057 1.2 2.5 0.0 134 161 232 260 203 262 0.73 # 101004 # 102119 # 1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_86 - 310 DUF2431 PF10354.4 166 0.0013 12.6 0.0 1 1 9e-06 0.0019 12.1 0.0 60 128 58 127 13 151 0.82 # 71353 # 72282 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484 2_18 - 175 Seryl_tRNA_N PF02403.17 108 8.1e-05 16.6 10.9 1 2 3.9e-07 8.1e-05 16.6 10.9 19 101 44 123 31 125 0.90 # 15592 # 16116 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.472 2_18 - 175 Seryl_tRNA_N PF02403.17 108 8.1e-05 16.6 10.9 2 2 9.1e-05 0.019 9.0 1.6 67 105 117 155 114 157 0.91 # 15592 # 16116 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.472 1_92 - 262 MipZ PF09140.6 261 6.1e-10 32.5 0.0 1 2 6.7e-10 1.4e-07 24.8 0.0 2 52 4 55 3 79 0.83 # 75388 # 76173 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_92 - 262 MipZ PF09140.6 261 6.1e-10 32.5 0.0 2 2 0.00051 0.11 5.5 0.0 90 121 118 149 89 166 0.74 # 75388 # 76173 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 3_5 - 565 3HCDH_N PF02737.13 180 0.0067 10.0 6.4 1 2 0.0047 1 2.9 2.4 1 30 99 128 99 134 0.93 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 3HCDH_N PF02737.13 180 0.0067 10.0 6.4 2 2 9e-05 0.019 8.6 0.1 2 39 272 309 271 348 0.73 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 GIDA PF01134.17 392 5.4e-08 26.0 6.6 1 3 3.5e-10 7.3e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 GIDA PF01134.17 392 5.4e-08 26.0 6.6 2 3 0.038 8 -0.9 0.0 3 31 273 301 271 315 0.84 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 GIDA PF01134.17 392 5.4e-08 26.0 6.6 3 3 0.018 3.9 0.1 0.1 349 385 393 429 387 433 0.77 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 504 UvrD_C_2 PF13538.1 104 1.4e-10 35.2 0.5 1 1 3.3e-12 6.9e-10 33.0 0.0 42 99 398 463 351 467 0.68 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 3_5 - 565 Pyr_redox_2 PF07992.9 201 1.7e-43 142.8 0.0 1 1 3.2e-45 6.9e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_44 - 284 Usp PF00582.21 140 1.2e-34 113.4 0.1 1 2 1.4e-19 2.9e-17 57.1 0.1 3 140 2 157 1 157 0.94 # 36072 # 36923 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_44 - 284 Usp PF00582.21 140 1.2e-34 113.4 0.1 2 2 5.2e-18 1.1e-15 52.0 0.0 4 140 165 283 163 283 0.85 # 36072 # 36923 # 1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 1_110 - 488 AAA_2 PF07724.9 171 1.1e-05 19.4 0.0 1 1 1.9e-07 4.1e-05 17.5 0.0 6 92 245 325 240 333 0.90 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_71 - 622 DUF87 PF01935.12 229 2.5e-08 27.9 0.0 1 1 4.9e-10 5.2e-08 26.9 0.0 24 63 173 211 168 252 0.88 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_55 - 815 DUF87 PF01935.12 229 6.1e-07 23.4 0.1 1 1 1.3e-08 1.3e-06 22.3 0.1 24 153 452 580 432 659 0.72 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_123 - 142 AAA_22 PF13401.1 131 2.4e-06 21.7 0.5 1 2 0.00012 0.0043 11.2 0.2 4 24 30 50 26 57 0.85 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_123 - 142 AAA_22 PF13401.1 131 2.4e-06 21.7 0.5 2 2 0.00021 0.0074 10.4 0.0 60 122 49 118 48 124 0.88 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_16 - 504 AAA_22 PF13401.1 131 5e-05 17.4 0.0 1 2 0.00011 0.0039 11.3 0.0 8 68 23 92 17 131 0.65 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 2_16 - 504 AAA_22 PF13401.1 131 5e-05 17.4 0.0 2 2 0.029 1 3.5 0.0 82 124 189 225 163 229 0.77 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 1_71 - 622 AAA_22 PF13401.1 131 6.5e-05 17.1 0.0 1 1 6.7e-06 0.00023 15.3 0.0 3 68 171 231 166 289 0.83 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_42 - 323 AAA_22 PF13401.1 131 0.00026 15.1 0.0 1 1 1.6e-05 0.00055 14.1 0.0 5 54 62 103 56 164 0.76 # 30025 # 30993 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 1_110 - 488 AAA_22 PF13401.1 131 0.00065 13.8 0.5 1 1 0.0018 0.063 7.4 0.8 69 121 283 344 243 354 0.66 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_55 - 815 AAA_22 PF13401.1 131 0.0015 12.7 0.0 1 2 0.0022 0.077 7.1 0.0 5 27 452 474 447 506 0.82 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_55 - 815 AAA_22 PF13401.1 131 0.0015 12.7 0.0 2 2 0.064 2.3 2.4 0.0 88 102 650 667 604 718 0.73 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 3_5 - 565 DFP PF04127.10 185 0.0016 12.0 2.4 1 2 0.00039 0.083 6.4 0.4 28 51 105 128 99 156 0.83 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DFP PF04127.10 185 0.0016 12.0 2.4 2 2 0.0014 0.29 4.7 0.1 32 53 281 302 276 336 0.77 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_24 - 542 DNA_methylase PF00145.12 335 4.1e-28 92.3 0.0 1 1 1.6e-29 1.7e-27 90.3 0.0 3 333 126 441 124 443 0.76 # 16036 # 17661 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_82 - 476 DNA_methylase PF00145.12 335 1.7e-10 34.4 0.0 1 2 1.3e-11 1.4e-09 31.4 0.0 71 160 228 320 198 325 0.86 # 68597 # 70024 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.512 1_82 - 476 DNA_methylase PF00145.12 335 1.7e-10 34.4 0.0 2 2 0.031 3.3 0.6 0.0 292 330 409 448 344 452 0.76 # 68597 # 70024 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.512 1_92 - 262 SRP54 PF00448.17 196 0.0019 11.6 0.1 1 2 0.001 0.21 4.9 0.1 11 38 13 41 3 45 0.83 # 75388 # 76173 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_92 - 262 SRP54 PF00448.17 196 0.0019 11.6 0.1 2 2 0.0014 0.3 4.4 0.0 82 154 125 198 104 208 0.71 # 75388 # 76173 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_42 - 323 AAA_3 PF07726.6 131 0.00015 15.3 0.0 1 1 1.1e-06 0.00023 14.7 0.0 3 114 65 188 63 212 0.80 # 30025 # 30993 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 3_5 - 565 NAD_binding_7 PF13241.1 103 7.2e-07 23.4 1.2 1 2 5.4e-05 0.011 9.9 0.2 9 38 99 128 96 184 0.89 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_7 PF13241.1 103 7.2e-07 23.4 1.2 2 2 1.4e-05 0.003 11.8 0.1 8 41 270 306 264 380 0.74 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_97 - 417 N6_N4_Mtase PF01555.13 231 3.3e-25 82.8 0.0 1 1 5.5e-27 5.8e-25 82.0 0.0 1 228 129 389 129 392 0.82 # 77246 # 78496 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_33 - 295 N6_N4_Mtase PF01555.13 231 2.4e-08 27.7 0.1 1 2 2.7e-06 0.00028 14.3 0.0 180 223 28 72 4 76 0.84 # 20783 # 21667 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_33 - 295 N6_N4_Mtase PF01555.13 231 2.4e-08 27.7 0.1 2 2 2.5e-05 0.0026 11.2 0.1 2 167 90 266 89 283 0.70 # 20783 # 21667 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_123 - 142 AAA_17 PF13207.1 121 3.8e-05 18.5 0.0 1 1 6.9e-07 4.8e-05 18.1 0.0 3 47 34 74 32 135 0.70 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_42 - 323 AAA_17 PF13207.1 121 5.3e-05 18.0 0.0 1 1 1.7e-06 0.00012 16.9 0.0 3 27 65 89 64 166 0.90 # 30025 # 30993 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 1_110 - 488 AAA_17 PF13207.1 121 0.0003 15.6 0.0 1 1 1.9e-05 0.0013 13.5 0.0 2 63 245 299 245 388 0.63 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_71 - 622 MobB PF03205.9 140 0.00062 13.5 0.1 1 1 1.4e-05 0.003 11.3 0.0 4 34 176 206 174 214 0.90 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_92 - 262 ArsA_ATPase PF02374.10 305 1.4e-05 18.1 0.0 1 2 3e-07 6.4e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 75388 # 76173 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_92 - 262 ArsA_ATPase PF02374.10 305 1.4e-05 18.1 0.0 2 2 0.032 6.7 -0.5 0.0 124 136 124 136 106 142 0.80 # 75388 # 76173 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 2_16 - 504 PhoH PF02562.11 205 3.6e-06 20.3 0.1 1 2 0.002 0.22 4.7 0.0 22 46 22 46 4 63 0.79 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 2_16 - 504 PhoH PF02562.11 205 3.6e-06 20.3 0.1 2 2 1.5e-05 0.0016 11.7 0.0 122 168 196 240 193 255 0.83 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 1_123 - 142 PhoH PF02562.11 205 0.0012 12.1 0.0 1 1 1.7e-05 0.0018 11.4 0.0 11 38 21 49 11 61 0.77 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_42 - 323 T2SE PF00437.15 272 8.9e-05 15.4 0.0 1 1 2e-06 0.00021 14.2 0.0 105 148 40 81 11 100 0.80 # 30025 # 30993 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 1_71 - 622 T2SE PF00437.15 272 0.0002 14.2 0.0 1 1 3e-06 0.00032 13.6 0.0 116 162 163 206 108 227 0.81 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_110 - 488 Zeta_toxin PF06414.7 201 0.00035 13.7 0.0 1 1 3.1e-06 0.00066 12.7 0.0 18 52 244 277 239 314 0.90 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 3_5 - 565 NAD_binding_8 PF13450.1 68 7.4e-05 16.7 1.2 1 2 3.5e-07 7.4e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_8 PF13450.1 68 7.4e-05 16.7 1.2 2 2 0.041 8.6 0.5 0.2 1 25 274 298 274 303 0.81 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 F420_oxidored PF03807.12 96 0.015 9.7 4.1 1 2 0.0023 0.49 4.9 1.2 2 31 100 126 99 131 0.87 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 F420_oxidored PF03807.12 96 0.015 9.7 4.1 2 2 0.0075 1.6 3.3 0.1 1 34 271 300 271 323 0.87 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_140 - 372 TIGR02432 TIGR02432 189 0.00012 15.7 0.4 1 3 1.4e-05 0.0029 11.2 0.0 1 58 52 109 52 119 0.86 # 101004 # 102119 # 1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_140 - 372 TIGR02432 TIGR02432 189 0.00012 15.7 0.4 2 3 0.066 14 -0.8 0.1 52 92 194 234 187 241 0.75 # 101004 # 102119 # 1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_140 - 372 TIGR02432 TIGR02432 189 0.00012 15.7 0.4 3 3 0.01 2.2 1.8 0.0 140 165 235 260 211 262 0.76 # 101004 # 102119 # 1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_42 - 323 Arch_ATPase PF01637.13 234 8.8e-05 16.2 0.0 1 1 7e-07 0.00015 15.5 0.0 4 44 45 85 43 94 0.91 # 30025 # 30993 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 1_55 - 815 AAA_16 PF13191.1 185 2.2e-05 18.5 0.1 1 1 1.8e-06 0.00013 16.0 0.1 20 173 447 637 439 647 0.47 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_42 - 323 AAA_16 PF13191.1 185 4.9e-05 17.3 0.7 1 1 2.2e-06 0.00015 15.7 0.0 7 48 47 85 42 102 0.79 # 30025 # 30993 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 1_123 - 142 AAA_16 PF13191.1 185 0.0031 11.4 1.0 1 1 7.3e-05 0.0052 10.7 0.6 24 44 30 50 19 53 0.81 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_18 - 175 AAA_13 PF13166.1 712 0.0019 10.6 18.7 1 1 2.1e-05 0.0044 9.4 18.7 331 485 7 166 2 173 0.44 # 15592 # 16116 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.472 1_92 - 262 CbiA PF01656.18 195 1.2e-30 100.3 0.0 1 1 1.5e-32 1.6e-30 99.9 0.0 1 184 5 217 5 230 0.78 # 75388 # 76173 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_55 - 815 CbiA PF01656.18 195 0.0014 12.0 0.0 1 1 2.9e-05 0.0031 10.9 0.0 3 45 455 497 454 598 0.75 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_123 - 142 KaiC PF06745.8 227 0.001 12.1 0.0 1 1 7.7e-06 0.0016 11.5 0.0 7 38 18 49 13 69 0.88 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_123 - 142 AAA_14 PF13173.1 128 4.4e-06 20.6 0.0 1 1 4.9e-08 5.2e-06 20.4 0.0 2 107 30 130 29 141 0.75 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 2_16 - 504 AAA_14 PF13173.1 128 2.5e-05 18.1 1.7 1 2 5.9e-05 0.0063 10.4 0.0 11 44 28 60 18 86 0.77 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 2_16 - 504 AAA_14 PF13173.1 128 2.5e-05 18.1 1.7 2 2 0.0015 0.16 5.8 0.0 50 99 175 227 109 239 0.71 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 3_5 - 565 HI0933_like PF03486.9 409 4.7e-08 25.8 3.7 1 2 1.2e-06 0.00025 13.5 2.5 2 33 99 130 98 138 0.91 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 HI0933_like PF03486.9 409 4.7e-08 25.8 3.7 2 2 7.2e-06 0.0015 10.9 0.0 82 164 284 366 276 385 0.83 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_71 - 622 AAA_29 PF13555.1 62 0.00036 14.0 0.0 1 1 1.2e-05 0.00083 12.9 0.0 21 42 171 191 163 202 0.82 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_123 - 142 AAA_29 PF13555.1 62 0.00069 13.1 0.1 1 1 1.9e-05 0.0013 12.2 0.1 20 39 28 46 18 49 0.83 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_42 - 323 AAA_29 PF13555.1 62 0.0025 11.3 1.0 1 1 8.1e-05 0.0057 10.2 0.3 21 38 59 76 54 79 0.86 # 30025 # 30993 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 3_5 - 565 FAD_binding_2 PF00890.19 417 9e-06 18.6 4.7 1 3 4.3e-08 9e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 FAD_binding_2 PF00890.19 417 9e-06 18.6 4.7 2 3 0.034 7.2 -0.8 0.1 143 204 311 369 297 388 0.72 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 FAD_binding_2 PF00890.19 417 9e-06 18.6 4.7 3 3 0.074 16 -1.9 0.0 376 402 388 408 377 424 0.82 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_110 - 488 AAA PF00004.24 132 1.5e-29 96.8 0.0 1 1 2.7e-30 1.9e-28 93.3 0.0 1 131 245 371 245 372 0.97 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_123 - 142 AAA PF00004.24 132 0.00016 15.9 0.3 1 1 2.5e-05 0.0018 12.5 0.3 2 123 34 134 33 140 0.63 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_42 - 323 AAA PF00004.24 132 0.00073 13.7 0.1 1 1 2.2e-05 0.0016 12.6 0.1 2 33 65 96 64 149 0.83 # 30025 # 30993 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 2_16 - 504 UvrD_C PF13361.1 351 5.5e-10 33.1 0.0 1 1 4.5e-12 9.5e-10 32.3 0.0 240 347 361 468 333 472 0.71 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 1_140 - 372 PAPS_reduct PF01507.14 174 6e-11 36.4 0.4 1 2 0.028 3 1.6 0.0 2 17 53 68 52 91 0.76 # 101004 # 102119 # 1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_140 - 372 PAPS_reduct PF01507.14 174 6e-11 36.4 0.4 2 2 6.8e-12 7.2e-10 32.9 0.2 60 172 156 279 140 281 0.83 # 101004 # 102119 # 1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_19 - 817 PAPS_reduct PF01507.14 174 0.00041 14.2 0.0 1 1 1.3e-05 0.0014 12.4 0.0 3 151 69 255 67 261 0.68 # 11396 # 13846 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.506 1_123 - 142 Sigma54_activat PF00158.21 168 6.7e-05 16.4 0.1 1 2 2.6e-05 0.0054 10.1 0.0 23 42 31 50 13 77 0.76 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_123 - 142 Sigma54_activat PF00158.21 168 6.7e-05 16.4 0.1 2 2 0.0016 0.33 4.3 0.0 87 103 77 93 69 105 0.85 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 3_5 - 565 Pyr_redox_3 PF13738.1 203 2.7e-17 57.4 0.1 1 2 4.4e-14 9.4e-12 39.3 0.1 1 201 101 303 101 305 0.75 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 Pyr_redox_3 PF13738.1 203 2.7e-17 57.4 0.1 2 2 9e-07 0.00019 15.5 0.0 93 147 320 375 309 430 0.76 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_89 - 212 N6_Mtase PF02384.11 311 8e-07 22.3 0.0 1 1 6.8e-09 1.4e-06 21.5 0.0 3 97 71 166 69 198 0.74 # 73203 # 73838 # 1 # ID=1_89;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 1_123 - 142 DUF258 PF03193.11 161 0.00021 14.5 0.0 1 1 1.3e-06 0.00028 14.1 0.0 28 93 22 90 4 92 0.64 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_71 - 622 TraG-D_C PF12696.2 128 5e-15 49.5 0.0 1 1 1e-16 1.1e-14 48.4 0.0 1 124 471 595 471 599 0.83 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_55 - 815 TraG-D_C PF12696.2 128 1.2e-06 22.4 0.0 1 1 2.8e-08 3e-06 21.1 0.0 17 75 673 727 655 733 0.82 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_92 - 262 AAA_31 PF13614.1 157 4.4e-10 33.7 0.0 1 1 4.5e-12 9.5e-10 32.6 0.0 1 149 3 157 3 165 0.80 # 75388 # 76173 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_110 - 488 AAA_33 PF13671.1 143 0.00053 13.8 0.0 1 1 1.8e-05 0.0019 12.1 0.0 2 53 245 295 245 391 0.74 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_123 - 142 AAA_33 PF13671.1 143 0.0012 12.7 0.1 1 1 1.6e-05 0.0017 12.2 0.1 3 24 34 54 32 92 0.79 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_97 - 417 Methyltransf_26 PF13659.1 117 0.00012 16.1 0.0 1 2 5.6e-06 0.0012 12.9 0.0 68 116 126 180 46 181 0.81 # 77246 # 78496 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_97 - 417 Methyltransf_26 PF13659.1 117 0.00012 16.1 0.0 2 2 0.04 8.5 0.4 0.0 1 31 352 381 352 395 0.71 # 77246 # 78496 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_16 - 504 AAA_30 PF13604.1 196 1.2e-07 25.5 0.0 1 2 8.1e-07 0.00017 15.1 0.0 19 82 20 83 11 113 0.77 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 2_16 - 504 AAA_30 PF13604.1 196 1.2e-07 25.5 0.0 2 2 0.00016 0.034 7.7 0.0 115 133 211 229 172 282 0.74 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 1_71 - 622 FtsK_SpoIIIE PF01580.13 205 5.4e-08 26.5 0.0 1 2 7.6e-09 8e-07 22.6 0.0 37 81 169 211 137 234 0.81 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_71 - 622 FtsK_SpoIIIE PF01580.13 205 5.4e-08 26.5 0.0 2 2 0.028 2.9 1.2 0.0 176 204 481 509 472 510 0.86 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_55 - 815 FtsK_SpoIIIE PF01580.13 205 9.1e-07 22.5 0.0 1 1 3.4e-08 3.6e-06 20.5 0.1 33 133 446 559 401 697 0.62 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_123 - 142 ABC_tran PF00005.22 137 4.6e-06 20.9 0.1 1 1 8.7e-08 6.1e-06 20.5 0.1 3 43 22 67 21 135 0.72 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_42 - 323 ABC_tran PF00005.22 137 0.0015 12.8 0.0 1 1 4e-05 0.0028 11.9 0.0 11 46 61 96 55 117 0.85 # 30025 # 30993 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 1_71 - 622 ABC_tran PF00005.22 137 0.0016 12.7 0.0 1 1 0.00011 0.0076 10.5 0.0 13 44 174 205 168 272 0.77 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 3_5 - 565 K_oxygenase PF13434.1 341 1.2e-05 18.3 0.0 1 3 0.0039 0.83 2.4 0.0 187 220 94 125 59 130 0.79 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 K_oxygenase PF13434.1 341 1.2e-05 18.3 0.0 2 3 3.3e-06 0.00071 12.5 0.0 132 231 218 308 202 332 0.82 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 K_oxygenase PF13434.1 341 1.2e-05 18.3 0.0 3 3 0.057 12 -1.4 0.0 132 160 346 369 314 377 0.67 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 504 AAA_19 PF13245.1 76 3.3e-09 30.4 0.0 1 1 8.3e-11 8.7e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 1_42 - 323 AAA_19 PF13245.1 76 0.00033 14.4 0.1 1 1 7e-06 0.00074 13.3 0.1 10 35 61 86 51 112 0.76 # 30025 # 30993 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 1_55 - 815 AAA_10 PF12846.2 304 1.3e-58 192.7 0.2 1 1 4.2e-60 2.2e-58 192.0 0.2 1 296 451 728 451 737 0.93 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_71 - 622 AAA_10 PF12846.2 304 3.4e-19 63.3 0.2 1 1 1.5e-20 8e-19 62.1 0.2 2 299 173 549 172 553 0.72 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_123 - 142 AAA_10 PF12846.2 304 0.00078 12.9 0.4 1 2 0.0011 0.057 6.7 0.2 5 32 34 61 33 70 0.82 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_123 - 142 AAA_10 PF12846.2 304 0.00078 12.9 0.4 2 2 0.0055 0.29 4.4 0.0 221 278 84 132 73 138 0.84 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_84 - 104 AAA_10 PF12846.2 304 0.0017 11.7 0.0 1 1 4.1e-05 0.0022 11.4 0.0 249 267 23 41 19 54 0.90 # 70537 # 70848 # -1 # ID=1_84;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 3_5 - 565 FAD_oxidored PF12831.2 428 6.2e-06 19.4 3.6 1 1 2.9e-08 6.2e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DAO PF01266.19 358 8.9e-09 28.6 11.7 1 3 1.4e-08 2.9e-06 20.3 0.7 1 38 99 134 99 190 0.84 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DAO PF01266.19 358 8.9e-09 28.6 11.7 2 3 0.032 6.7 -0.6 0.1 3 31 273 301 271 307 0.75 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 DAO PF01266.19 358 8.9e-09 28.6 11.7 3 3 9.4e-07 0.0002 14.3 0.5 152 208 314 372 307 433 0.74 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 504 ResIII PF04851.10 184 1.3e-06 22.3 0.0 1 1 3.7e-08 2.6e-06 21.3 0.0 23 77 17 71 7 202 0.83 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 1_71 - 622 ResIII PF04851.10 184 0.0001 16.2 0.0 1 1 2.9e-06 0.0002 15.2 0.0 22 57 162 206 129 214 0.72 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_123 - 142 ResIII PF04851.10 184 0.0012 12.6 0.1 1 2 0.014 1 3.1 0.0 22 44 26 49 4 62 0.77 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_123 - 142 ResIII PF04851.10 184 0.0012 12.6 0.1 2 2 0.00045 0.031 8.0 0.0 134 169 71 106 54 136 0.75 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_55 - 815 Zot PF05707.7 193 0.0016 11.9 0.0 1 1 2.4e-05 0.0051 10.2 0.0 79 132 652 701 618 720 0.80 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 2_18 - 175 DUF3584 PF12128.3 1201 0.041 5.1 27.2 1 1 7e-05 0.015 6.5 23.1 612 710 52 149 24 173 0.50 # 15592 # 16116 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.472 2_16 - 504 Viral_helicase1 PF01443.13 234 1.6e-10 34.8 0.0 1 3 1.3e-05 0.0027 11.2 0.0 2 49 23 73 22 87 0.66 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 2_16 - 504 Viral_helicase1 PF01443.13 234 1.6e-10 34.8 0.0 2 3 1.7e-05 0.0036 10.8 0.0 56 105 188 234 142 257 0.78 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 2_16 - 504 Viral_helicase1 PF01443.13 234 1.6e-10 34.8 0.0 3 3 5.1e-05 0.011 9.2 0.0 175 227 403 462 344 467 0.75 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 3_5 - 565 NAD_binding_9 PF13454.1 156 6e-05 16.8 2.8 1 3 0.0081 1.7 2.3 0.1 1 41 101 135 101 162 0.81 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_9 PF13454.1 156 6e-05 16.8 2.8 2 3 0.034 7.1 0.3 0.0 134 155 218 241 202 242 0.72 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 NAD_binding_9 PF13454.1 156 6e-05 16.8 2.8 3 3 6.6e-06 0.0014 12.4 0.1 112 155 321 366 311 367 0.85 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_71 - 622 DEAD PF00270.24 169 2.3e-05 17.9 0.0 1 1 2.1e-07 4.4e-05 17.0 0.0 13 52 171 208 159 231 0.86 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_110 - 488 DUF815 PF05673.8 250 3.3e-06 20.1 0.0 1 2 0.077 16 -1.8 0.0 95 128 61 94 57 105 0.80 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_110 - 488 DUF815 PF05673.8 250 3.3e-06 20.1 0.0 2 2 6.4e-08 1.3e-05 18.1 0.0 19 154 208 353 194 365 0.75 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 3_5 - 565 Pyr_redox PF00070.22 80 7.6e-20 65.1 6.0 1 2 1.4e-06 0.0003 15.2 1.5 1 31 99 129 99 131 0.96 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 Pyr_redox PF00070.22 80 7.6e-20 65.1 6.0 2 2 6.2e-18 1.3e-15 51.6 0.2 1 74 271 345 271 354 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_71 - 622 DUF853 PF05872.7 504 2e-06 20.3 0.0 1 1 1.5e-08 3.1e-06 19.7 0.0 7 60 158 211 153 225 0.93 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_71 - 622 TrwB_AAD_bind PF10412.4 386 9.3e-20 64.5 0.0 1 2 3e-13 2.1e-11 37.0 0.0 10 54 167 211 161 310 0.71 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_71 - 622 TrwB_AAD_bind PF10412.4 386 9.3e-20 64.5 0.0 2 2 1e-09 7.3e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_55 - 815 TrwB_AAD_bind PF10412.4 386 2.1e-08 27.1 0.0 1 2 2.2e-05 0.0016 11.0 0.0 6 72 442 517 438 519 0.85 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_55 - 815 TrwB_AAD_bind PF10412.4 386 2.1e-08 27.1 0.0 2 2 3.5e-06 0.00024 13.7 0.1 228 301 638 711 606 730 0.68 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_80 - 206 TrwB_AAD_bind PF10412.4 386 0.00083 12.0 0.0 1 1 1.8e-05 0.0013 11.4 0.0 16 46 9 39 4 43 0.91 # 67267 # 67884 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.494 2_16 - 504 AAA_11 PF13086.1 236 3e-07 24.2 0.1 1 1 5.9e-09 1.2e-06 22.1 0.1 23 228 25 228 8 229 0.66 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 1_55 - 815 Guanylate_kin PF00625.16 183 0.00031 14.2 0.1 1 3 0.0039 0.81 3.0 0.0 3 26 452 475 450 503 0.86 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_55 - 815 Guanylate_kin PF00625.16 183 0.00031 14.2 0.1 2 3 0.011 2.3 1.6 0.1 75 115 595 636 590 701 0.82 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_55 - 815 Guanylate_kin PF00625.16 183 0.00031 14.2 0.1 3 3 0.0011 0.23 4.8 0.0 75 131 713 769 697 776 0.87 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_71 - 622 T4SS-DNA_transf PF02534.9 469 8.3e-05 15.2 0.0 1 2 9e-07 0.00019 14.0 0.0 37 90 168 219 125 312 0.68 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_71 - 622 T4SS-DNA_transf PF02534.9 469 8.3e-05 15.2 0.0 2 2 0.094 20 -2.5 0.0 328 389 494 555 472 573 0.75 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_71 - 622 ArgK PF03308.11 267 0.00021 14.1 0.0 1 1 1.7e-06 0.00036 13.3 0.0 12 68 158 209 153 214 0.88 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_140 - 372 tRNA_Me_trans PF03054.11 356 0.00024 13.7 0.0 1 1 1.6e-06 0.00034 13.2 0.0 2 71 52 122 51 144 0.73 # 101004 # 102119 # 1 # ID=1_140;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_22 - 185 Nup35_RRM PF05172.8 101 0.0014 12.4 0.0 1 1 1e-05 0.0022 11.7 0.0 38 87 60 110 53 116 0.89 # 14917 # 15471 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468 3_5 - 565 AlaDh_PNT_C PF01262.16 168 5e-05 16.9 3.1 1 2 0.00051 0.11 6.0 0.8 15 50 92 127 89 130 0.90 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_5 - 565 AlaDh_PNT_C PF01262.16 168 5e-05 16.9 3.1 2 2 2.1e-05 0.0045 10.5 0.1 16 58 265 307 257 339 0.84 # 1651 # 3345 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_16 - 504 UvrD-helicase PF00580.16 315 9.6e-17 55.1 4.8 1 2 2.3e-06 0.00048 13.4 0.1 2 39 8 45 7 64 0.81 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 2_16 - 504 UvrD-helicase PF00580.16 315 9.6e-17 55.1 4.8 2 2 3.4e-15 7.1e-13 42.4 0.6 230 305 155 239 54 246 0.71 # 13794 # 15305 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.472 1_110 - 488 AAA_25 PF13481.1 194 0.00023 14.5 4.4 1 3 0.05 2.1 1.6 1.2 36 55 245 264 223 278 0.80 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_110 - 488 AAA_25 PF13481.1 194 0.00023 14.5 4.4 2 3 0.00016 0.0066 9.8 0.0 127 177 287 337 268 351 0.69 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_110 - 488 AAA_25 PF13481.1 194 0.00023 14.5 4.4 3 3 0.038 1.6 2.0 0.0 69 164 337 434 325 448 0.64 # 84555 # 86018 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.495 1_71 - 622 AAA_25 PF13481.1 194 0.00032 14.1 0.0 1 1 2.5e-05 0.001 12.4 0.0 20 137 159 265 145 272 0.78 # 57321 # 59186 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.497 1_123 - 142 AAA_25 PF13481.1 194 0.00038 13.8 0.0 1 1 1.2e-05 0.00052 13.4 0.0 7 51 4 48 1 69 0.89 # 91394 # 91819 # -1 # ID=1_123;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_55 - 815 AAA_25 PF13481.1 194 0.00073 12.9 0.0 1 1 4.3e-05 0.0018 11.6 0.0 36 86 454 494 447 531 0.82 # 40662 # 43106 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_92 - 262 AAA_25 PF13481.1 194 0.00092 12.6 0.0 1 1 3.2e-05 0.0013 12.1 0.0 42 91 12 51 11 133 0.82 # 75388 # 76173 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_42 - 323 AAA_5 PF07728.9 139 2.1e-18 60.4 0.0 1 1 1.6e-20 3.3e-18 59.7 0.0 2 125 64 188 63 197 0.94 # 30025 # 30993 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/3a89e040-4889-40b5-8ed4-1f0adeb14757 # Target file: checkm_output/bins/pm1329/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1329/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3a89e040-4889-40b5-8ed4-1f0adeb14757 checkm_output/bins/pm1329/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:55:41 2020 # [ok]