# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 4_9 - 578 Mg_chelatase PF01078.16 207 1.8e-06 21.4 0.2 1 3 8e-05 0.019 8.2 0.0 18 49 32 63 18 105 0.88 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 Mg_chelatase PF01078.16 207 1.8e-06 21.4 0.2 2 3 0.016 3.8 0.7 0.0 172 199 144 171 133 177 0.83 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 Mg_chelatase PF01078.16 207 1.8e-06 21.4 0.2 3 3 8.4e-05 0.02 8.1 0.0 25 59 317 350 311 388 0.75 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 5_10 - 267 Methyltransf_28 PF02636.12 252 0.0013 12.2 0.0 1 1 7.5e-06 0.0018 11.8 0.0 54 107 54 109 47 168 0.83 # 8627 # 9427 # -1 # ID=5_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.574 1_75 - 237 UPF0020 PF01170.13 180 1.2e-06 22.4 0.0 1 2 0.00012 0.029 8.0 0.0 102 121 22 41 7 89 0.71 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_75 - 237 UPF0020 PF01170.13 180 1.2e-06 22.4 0.0 2 2 5.7e-06 0.0014 12.4 0.0 27 54 168 195 163 222 0.80 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 4_9 - 578 IstB_IS21 PF01695.12 178 0.0035 10.9 0.8 1 3 0.0045 1.1 2.8 0.0 48 67 37 56 22 59 0.83 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 IstB_IS21 PF01695.12 178 0.0035 10.9 0.8 2 3 0.033 7.8 -0.0 0.0 98 143 164 208 132 223 0.73 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 IstB_IS21 PF01695.12 178 0.0035 10.9 0.8 3 3 0.0023 0.53 3.8 0.0 48 67 315 334 297 338 0.84 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_86 - 418 MipZ PF09140.6 261 2e-08 27.7 0.0 1 2 0.00065 0.077 6.1 0.0 3 48 127 177 125 211 0.78 # 72177 # 73430 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.415 1_86 - 418 MipZ PF09140.6 261 2e-08 27.7 0.0 2 2 7.2e-08 8.5e-06 19.1 0.0 84 136 246 298 230 333 0.85 # 72177 # 73430 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.415 2_10 - 389 MipZ PF09140.6 261 1e-05 18.8 0.3 1 2 7e-06 0.00083 12.6 0.0 2 47 108 153 107 157 0.87 # 6161 # 7327 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 2_10 - 389 MipZ PF09140.6 261 1e-05 18.8 0.3 2 2 0.0023 0.27 4.3 0.0 88 134 224 270 197 292 0.85 # 6161 # 7327 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 10_6 - 549 3HCDH_N PF02737.13 180 0.022 8.5 6.1 1 2 0.0099 2.3 1.9 2.1 1 30 87 116 87 120 0.92 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 3HCDH_N PF02737.13 180 0.022 8.5 6.1 2 2 0.00012 0.029 8.1 0.1 2 38 260 296 259 346 0.71 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 GIDA PF01134.17 392 3.6e-07 23.4 1.4 1 3 0.02 4.6 0.0 0.0 298 347 2 54 1 61 0.82 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 GIDA PF01134.17 392 3.6e-07 23.4 1.4 2 3 1.5e-09 3.6e-07 23.4 1.4 2 161 88 240 87 282 0.70 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 GIDA PF01134.17 392 3.6e-07 23.4 1.4 3 3 0.0063 1.5 1.6 0.2 349 385 377 413 366 417 0.79 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 Pyr_redox_2 PF07992.9 201 3.2e-41 135.5 0.0 1 1 3.5e-43 8.3e-41 134.2 0.0 2 199 88 394 87 396 0.95 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 4_9 - 578 tRNA_lig_kinase PF08303.6 168 0.00033 14.7 0.0 1 1 6.7e-06 0.0016 12.5 0.0 9 77 324 387 318 403 0.86 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 DUF87 PF01935.12 229 1e-05 19.6 0.2 1 2 0.0012 0.14 6.0 0.0 26 59 39 74 36 77 0.77 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 DUF87 PF01935.12 229 1e-05 19.6 0.2 2 2 3.7e-05 0.0043 11.0 0.0 26 45 317 336 307 339 0.91 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_23 - 882 DUF87 PF01935.12 229 1.8e-05 18.8 0.0 1 1 2.8e-07 3.3e-05 17.9 0.0 26 68 488 529 483 596 0.87 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 4_9 - 578 NB-ARC PF00931.17 287 0.0039 10.1 1.0 1 1 3.1e-05 0.0073 9.2 0.1 21 41 316 336 313 341 0.90 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_22 PF13401.1 131 1.6e-11 38.6 2.4 1 2 6.4e-06 0.0005 14.3 0.3 7 123 39 214 35 220 0.69 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_22 PF13401.1 131 1.6e-11 38.6 2.4 2 2 4.7e-08 3.7e-06 21.3 0.1 9 122 319 483 315 500 0.76 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 2_15 - 145 AAA_22 PF13401.1 131 9.9e-06 19.9 0.0 1 1 1.8e-07 1.4e-05 19.4 0.0 5 41 45 90 40 143 0.75 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_23 - 882 AAA_22 PF13401.1 131 0.00048 14.4 0.1 1 2 0.00011 0.0087 10.3 0.0 7 28 488 509 484 538 0.85 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 1_23 - 882 AAA_22 PF13401.1 131 0.00048 14.4 0.1 2 2 0.096 7.5 0.8 0.0 78 101 687 711 653 738 0.68 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 1_55 - 307 Methyltransf_11 PF08241.7 95 4.2e-06 21.3 0.0 1 1 4e-08 9.4e-06 20.2 0.0 49 95 183 229 139 229 0.83 # 49243 # 50163 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 4_9 - 578 PRK PF00485.13 194 6.2e-06 20.0 0.0 1 2 0.0025 0.59 3.7 0.0 3 26 40 63 38 121 0.83 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 PRK PF00485.13 194 6.2e-06 20.0 0.0 2 2 1.9e-06 0.00044 13.9 0.0 2 74 317 389 316 403 0.82 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_23 - 882 KAP_NTPase PF07693.9 325 0.00015 14.9 0.0 1 1 1e-06 0.00025 14.2 0.0 7 94 472 698 468 746 0.87 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 4_9 - 578 AAA_15 PF13175.1 415 0.0052 9.9 0.1 1 2 0.00024 0.056 6.5 0.0 372 411 177 216 167 220 0.83 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_15 PF13175.1 415 0.0052 9.9 0.1 2 2 0.015 3.5 0.6 0.0 27 42 319 334 310 354 0.87 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 10_6 - 549 NAD_binding_7 PF13241.1 103 6.7e-06 20.5 0.8 1 2 2.9e-05 0.0068 10.8 0.1 6 38 84 116 80 174 0.88 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 NAD_binding_7 PF13241.1 103 6.7e-06 20.5 0.8 2 2 0.00025 0.059 7.8 0.1 9 45 259 301 251 401 0.73 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 1_75 - 237 N6_N4_Mtase PF01555.13 231 1.5e-34 113.6 0.0 1 2 7e-14 1.6e-11 38.2 0.0 1 114 27 130 27 145 0.92 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_75 - 237 N6_N4_Mtase PF01555.13 231 1.5e-34 113.6 0.0 2 2 9.1e-25 2.1e-22 73.8 0.0 169 227 147 205 136 209 0.91 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 4_9 - 578 AAA_17 PF13207.1 121 8.8e-06 20.7 0.0 1 2 0.045 2.6 3.0 0.0 3 14 40 51 38 85 0.88 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_17 PF13207.1 121 8.8e-06 20.7 0.0 2 2 7.4e-06 0.00044 15.2 0.0 3 22 318 337 316 408 0.74 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_23 - 882 AAA_17 PF13207.1 121 9.8e-05 17.3 0.0 1 1 3.8e-06 0.00023 16.1 0.0 2 100 488 610 487 640 0.57 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 1_3 - 865 AAA_17 PF13207.1 121 0.00012 17.0 0.0 1 1 7e-06 0.00041 15.3 0.0 3 60 197 256 195 330 0.69 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 1_95 - 164 AAA_17 PF13207.1 121 0.0024 12.8 0.0 1 1 4.8e-05 0.0028 12.6 0.0 6 67 21 87 18 151 0.65 # 79390 # 79881 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.600 4_9 - 578 AAA_21 PF13304.1 303 7e-17 56.4 0.1 1 4 0.041 9.7 0.1 0.2 3 22 40 59 39 85 0.76 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_21 PF13304.1 303 7e-17 56.4 0.1 2 4 1e-11 2.4e-09 31.6 0.0 178 298 91 216 69 221 0.87 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_21 PF13304.1 303 7e-17 56.4 0.1 3 4 0.00044 0.1 6.6 0.0 3 22 318 337 316 356 0.86 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_21 PF13304.1 303 7e-17 56.4 0.1 4 4 7e-06 0.0016 12.5 0.0 233 301 423 489 419 491 0.92 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_2 - 337 ADH_zinc_N_2 PF13602.1 127 6.5e-10 34.1 0.0 1 1 5.2e-12 1.2e-09 33.2 0.0 2 126 193 332 192 333 0.74 # 462 # 1472 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_15 - 145 Miro PF08477.8 119 0.00037 15.1 0.0 1 1 2.5e-06 0.00058 14.5 0.0 3 33 48 74 47 101 0.80 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_3 - 865 MobB PF03205.9 140 0.0003 14.6 0.0 1 1 5e-06 0.00059 13.7 0.0 4 34 197 227 194 233 0.88 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 4_9 - 578 MobB PF03205.9 140 0.0017 12.2 0.2 1 1 8.6e-05 0.01 9.7 0.1 3 24 317 338 315 344 0.90 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_2 - 337 ADH_zinc_N PF00107.21 130 4.4e-10 33.3 0.0 1 1 4e-12 9.4e-10 32.3 0.0 2 110 160 264 159 280 0.88 # 462 # 1472 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_10 - 389 ArsA_ATPase PF02374.10 305 4.2e-06 20.1 0.4 1 2 1.7e-06 0.00039 13.6 0.1 9 36 115 142 109 151 0.89 # 6161 # 7327 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 2_10 - 389 ArsA_ATPase PF02374.10 305 4.2e-06 20.1 0.4 2 2 0.0011 0.26 4.3 0.0 123 136 231 244 221 251 0.84 # 6161 # 7327 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 2_15 - 145 T2SE PF00437.15 272 0.0015 11.5 0.0 1 1 1.5e-05 0.0018 11.3 0.0 116 155 35 71 2 81 0.78 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_23 - 882 T2SE PF00437.15 272 0.0016 11.4 0.0 1 1 2.6e-05 0.0031 10.5 0.0 66 152 432 509 390 513 0.58 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 4_9 - 578 Zeta_toxin PF06414.7 201 0.00021 14.5 0.1 1 2 0.00098 0.12 5.6 0.0 19 54 39 79 36 107 0.74 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 Zeta_toxin PF06414.7 201 0.00021 14.5 0.1 2 2 0.00054 0.063 6.4 0.0 21 51 319 349 316 365 0.82 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 2_15 - 145 Zeta_toxin PF06414.7 201 0.0011 12.2 0.0 1 1 1.2e-05 0.0014 11.8 0.0 19 52 47 78 38 101 0.86 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 10_6 - 549 NAD_binding_8 PF13450.1 68 0.00017 15.8 1.2 1 1 7.1e-07 0.00017 15.8 1.2 1 35 90 123 90 142 0.91 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 F420_oxidored PF03807.12 96 0.012 10.2 5.0 1 2 0.0016 0.39 5.4 1.6 2 31 88 114 87 119 0.86 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 F420_oxidored PF03807.12 96 0.012 10.2 5.0 2 2 0.004 0.94 4.1 0.1 1 35 259 289 259 326 0.87 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 4_9 - 578 SMC_N PF02463.14 220 4.6e-12 39.7 0.2 1 2 1.9e-08 4.5e-06 20.1 0.0 26 211 38 229 27 237 0.79 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 SMC_N PF02463.14 220 4.6e-12 39.7 0.2 2 2 4.4e-07 0.0001 15.7 0.1 27 211 317 499 307 506 0.77 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 2_10 - 389 VirC1 PF07015.6 231 0.00013 15.2 0.0 1 2 0.00028 0.066 6.3 0.0 4 42 109 147 107 154 0.91 # 6161 # 7327 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 2_10 - 389 VirC1 PF07015.6 231 0.00013 15.2 0.0 2 2 0.00026 0.061 6.5 0.0 84 139 235 290 220 316 0.77 # 6161 # 7327 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 2_15 - 145 Arch_ATPase PF01637.13 234 0.0003 14.6 0.1 1 1 3e-06 0.00035 14.4 0.1 21 115 45 142 35 144 0.66 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_3 - 865 Arch_ATPase PF01637.13 234 0.00061 13.6 0.0 1 1 1.1e-05 0.0013 12.6 0.0 23 68 196 241 187 322 0.82 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 1_3 - 865 AAA_16 PF13191.1 185 1.7e-08 28.8 0.0 1 1 3.7e-09 2.2e-07 25.2 0.0 18 63 187 241 181 260 0.88 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 4_9 - 578 AAA_16 PF13191.1 185 8e-06 20.0 8.2 1 2 0.00028 0.017 9.2 0.7 24 51 36 63 30 213 0.83 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_16 PF13191.1 185 8e-06 20.0 8.2 2 2 1.4e-05 0.00083 13.5 0.8 25 94 315 380 299 490 0.55 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_23 - 882 AAA_16 PF13191.1 185 0.00067 13.8 0.0 1 1 4.9e-05 0.0029 11.7 0.0 24 55 485 517 470 545 0.82 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 2_15 - 145 AAA_16 PF13191.1 185 0.002 12.3 0.0 1 1 3.3e-05 0.002 12.3 0.0 25 50 45 70 33 137 0.85 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 4_9 - 578 AAA_23 PF13476.1 202 0.00014 16.4 0.0 1 2 0.012 1.4 3.3 0.0 22 35 39 52 15 65 0.79 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_23 PF13476.1 202 0.00014 16.4 0.0 2 2 6.6e-05 0.0078 10.6 0.0 15 42 309 337 301 367 0.74 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_104 - 462 AAA_23 PF13476.1 202 0.015 9.7 4.8 1 2 0.00042 0.05 8.0 1.2 105 198 121 233 64 244 0.69 # 86449 # 87834 # 1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.514 1_104 - 462 AAA_23 PF13476.1 202 0.015 9.7 4.8 2 2 0.012 1.4 3.3 0.1 144 197 349 402 306 436 0.63 # 86449 # 87834 # 1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.514 4_9 - 578 AAA_18 PF13238.1 129 8.6e-07 23.4 0.0 1 2 0.0018 0.42 5.1 0.0 2 28 40 74 39 95 0.77 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_18 PF13238.1 129 8.6e-07 23.4 0.0 2 2 1.2e-06 0.00028 15.3 0.0 3 63 319 374 317 400 0.65 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 2_10 - 389 CbiA PF01656.18 195 1.2e-36 120.0 0.0 1 1 2.1e-38 1.6e-36 119.6 0.0 2 194 110 339 109 340 0.80 # 6161 # 7327 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 1_86 - 418 CbiA PF01656.18 195 1.3e-19 64.5 0.0 1 1 3e-21 2.3e-19 63.6 0.0 1 143 127 309 127 336 0.77 # 72177 # 73430 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.415 4_9 - 578 CbiA PF01656.18 195 0.031 7.8 5.5 1 2 0.002 0.16 5.5 0.0 4 24 41 61 39 66 0.87 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 CbiA PF01656.18 195 0.031 7.8 5.5 2 2 0.013 1.1 2.8 0.3 6 20 321 335 319 338 0.87 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_23 - 882 IIGP PF05049.8 376 0.0016 11.4 0.1 1 1 1.1e-05 0.0027 10.6 0.1 34 56 484 507 476 512 0.82 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 4_9 - 578 KaiC PF06745.8 227 0.0048 10.1 2.7 1 3 0.00056 0.13 5.4 0.0 19 37 36 54 27 59 0.88 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 KaiC PF06745.8 227 0.0048 10.1 2.7 2 3 0.083 20 -1.7 0.1 134 158 189 213 112 235 0.77 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 KaiC PF06745.8 227 0.0048 10.1 2.7 3 3 0.0019 0.44 3.7 0.1 19 37 314 332 306 336 0.86 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 10_6 - 549 HI0933_like PF03486.9 409 2.8e-07 23.4 5.3 1 2 5.1e-06 0.0012 11.4 3.1 2 34 87 119 86 127 0.89 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 HI0933_like PF03486.9 409 2.8e-07 23.4 5.3 2 2 4.7e-06 0.0011 11.5 0.0 84 164 274 350 268 371 0.84 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 4_9 - 578 AAA_29 PF13555.1 62 8.3e-08 25.8 1.5 1 2 5.5e-05 0.0043 10.7 0.0 23 46 36 59 24 67 0.75 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_29 PF13555.1 62 8.3e-08 25.8 1.5 2 2 1.3e-05 0.001 12.7 0.1 13 45 305 336 302 348 0.77 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 2_15 - 145 AAA_29 PF13555.1 62 0.00089 12.9 0.0 1 1 1.8e-05 0.0015 12.2 0.0 22 40 43 61 34 71 0.84 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_3 - 865 AAA_29 PF13555.1 62 0.0014 12.3 0.0 1 1 3.5e-05 0.0028 11.4 0.0 24 40 194 210 184 211 0.84 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 10_6 - 549 FAD_binding_2 PF00890.19 417 3.4e-05 16.9 4.7 1 3 1.4e-07 3.4e-05 16.9 4.7 2 32 88 118 87 125 0.90 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 FAD_binding_2 PF00890.19 417 3.4e-05 16.9 4.7 2 3 0.021 5 -0.1 1.1 142 204 298 353 292 371 0.71 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 FAD_binding_2 PF00890.19 417 3.4e-05 16.9 4.7 3 3 0.0027 0.63 2.8 0.2 374 402 362 392 356 406 0.85 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 4_9 - 578 AAA PF00004.24 132 2.4e-06 21.9 1.3 1 2 0.014 3.2 2.1 0.3 2 22 40 60 39 229 0.72 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA PF00004.24 132 2.4e-06 21.9 1.3 2 2 8.5e-07 0.0002 15.7 0.0 3 52 319 372 317 496 0.76 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_89 - 93 Val_tRNA-synt_C PF10458.4 66 0.00073 13.8 0.6 1 1 3.1e-06 0.00073 13.8 0.6 1 23 58 80 58 89 0.87 # 75302 # 75580 # 1 # ID=1_89;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.491 4_9 - 578 Sigma54_activat PF00158.21 168 2.7e-05 17.8 0.1 1 3 0.00051 0.12 5.9 0.0 20 43 34 57 19 67 0.74 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 Sigma54_activat PF00158.21 168 2.7e-05 17.8 0.1 2 3 0.00022 0.053 7.1 0.0 27 45 319 337 307 349 0.86 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 Sigma54_activat PF00158.21 168 2.7e-05 17.8 0.1 3 3 0.038 9 -0.2 0.0 100 119 451 471 426 479 0.76 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 10_6 - 549 Pyr_redox_3 PF13738.1 203 6.6e-18 59.6 0.6 1 3 2.2e-05 0.0052 10.9 0.3 166 199 84 117 47 120 0.84 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 Pyr_redox_3 PF13738.1 203 6.6e-18 59.6 0.6 2 3 1.6e-13 3.8e-11 37.5 0.3 1 201 89 291 89 293 0.70 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 Pyr_redox_3 PF13738.1 203 6.6e-18 59.6 0.6 3 3 1.3e-07 3.2e-05 18.2 0.0 89 155 304 365 296 414 0.83 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 4_9 - 578 MMR_HSR1 PF01926.18 116 0.0011 13.0 0.0 1 2 0.087 10 0.3 0.0 2 16 39 53 38 79 0.82 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 MMR_HSR1 PF01926.18 116 0.0011 13.0 0.0 2 2 9.3e-05 0.011 9.8 0.0 2 21 317 336 316 420 0.73 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_3 - 865 MMR_HSR1 PF01926.18 116 0.0013 12.8 0.0 1 1 2.3e-05 0.0027 11.8 0.0 2 39 196 238 195 268 0.80 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 1_77 - 274 N6_Mtase PF02384.11 311 4.2e-08 26.7 0.0 1 1 2.4e-10 5.6e-08 26.3 0.0 22 116 135 235 119 256 0.81 # 65132 # 65953 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.572 4_9 - 578 DUF258 PF03193.11 161 3.4e-06 20.4 0.0 1 2 0.00012 0.014 8.7 0.0 15 49 15 50 9 74 0.84 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 DUF258 PF03193.11 161 3.4e-06 20.4 0.0 2 2 7.8e-05 0.0092 9.3 0.0 35 57 314 336 296 367 0.82 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 2_15 - 145 DUF258 PF03193.11 161 0.0003 14.1 0.0 1 1 3.4e-06 0.0004 13.7 0.0 35 59 44 68 25 103 0.84 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_3 - 865 TraG-D_C PF12696.2 128 1.9e-21 70.4 0.0 1 1 1.4e-23 3.4e-21 69.6 0.0 1 128 426 549 426 549 0.84 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 2_10 - 389 AAA_31 PF13614.1 157 2.3e-09 31.5 0.0 1 2 2.8e-08 3.3e-06 21.2 0.0 2 49 108 155 107 195 0.92 # 6161 # 7327 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 2_10 - 389 AAA_31 PF13614.1 157 2.3e-09 31.5 0.0 2 2 0.00036 0.042 7.9 0.1 110 152 227 268 223 272 0.84 # 6161 # 7327 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.500 1_86 - 418 AAA_31 PF13614.1 157 5e-05 17.4 0.3 1 2 0.0082 0.97 3.5 0.0 7 91 131 220 125 237 0.68 # 72177 # 73430 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.415 1_86 - 418 AAA_31 PF13614.1 157 5e-05 17.4 0.3 2 2 4.6e-05 0.0055 10.8 0.0 108 134 251 277 245 295 0.83 # 72177 # 73430 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.415 1_95 - 164 AAA_33 PF13671.1 143 6.5e-05 17.0 0.0 1 1 4.1e-07 9.7e-05 16.4 0.0 3 99 18 113 17 129 0.68 # 79390 # 79881 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.600 1_75 - 237 Methyltransf_26 PF13659.1 117 2.9e-13 44.0 0.2 1 2 3.2e-09 2.5e-07 24.9 0.0 53 112 9 75 3 80 0.81 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_75 - 237 Methyltransf_26 PF13659.1 117 2.9e-13 44.0 0.2 2 2 7.8e-07 6.1e-05 17.2 0.1 4 41 173 209 170 229 0.78 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_77 - 274 Methyltransf_26 PF13659.1 117 0.00061 14.0 0.0 1 1 1.8e-05 0.0014 12.8 0.0 6 64 173 238 170 259 0.85 # 65132 # 65953 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.572 1_55 - 307 Methyltransf_26 PF13659.1 117 0.00084 13.5 0.0 1 1 1.5e-05 0.0012 13.0 0.0 92 113 188 229 92 233 0.80 # 49243 # 50163 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 1_2 - 1457 AAA_30 PF13604.1 196 6.9e-42 137.3 4.7 1 2 0.00041 0.048 7.3 0.4 37 127 539 623 528 645 0.79 # 600 # 4970 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_2 - 1457 AAA_30 PF13604.1 196 6.9e-42 137.3 4.7 2 2 6.7e-42 7.9e-40 130.6 0.4 1 187 1044 1234 1044 1237 0.94 # 600 # 4970 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.597 2_15 - 145 AAA_30 PF13604.1 196 0.0016 12.1 0.0 1 1 1.9e-05 0.0022 11.7 0.0 12 42 38 68 34 80 0.85 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 4_9 - 578 FtsK_SpoIIIE PF01580.13 205 1.2e-05 18.9 0.0 1 2 0.00021 0.025 8.2 0.0 24 59 22 57 11 62 0.73 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 FtsK_SpoIIIE PF01580.13 205 1.2e-05 18.9 0.0 2 2 0.00029 0.034 7.7 0.0 31 59 307 335 282 341 0.77 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_23 - 882 FtsK_SpoIIIE PF01580.13 205 0.0012 12.4 0.0 1 1 3.1e-05 0.0037 10.8 0.0 39 62 483 509 469 512 0.82 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 4_9 - 578 ABC_tran PF00005.22 137 1.2e-62 204.4 0.0 1 2 2.3e-31 1.8e-29 96.9 0.0 2 136 27 184 26 185 0.91 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 ABC_tran PF00005.22 137 1.2e-62 204.4 0.0 2 2 5.2e-34 4.1e-32 105.5 0.0 2 135 305 453 304 455 0.90 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 2_15 - 145 ABC_tran PF00005.22 137 0.00021 15.7 0.0 1 1 2.9e-06 0.00023 15.6 0.0 15 37 48 70 38 131 0.88 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_95 - 164 ABC_tran PF00005.22 137 0.00083 13.8 0.0 1 1 1.2e-05 0.00093 13.6 0.0 15 71 18 75 14 154 0.75 # 79390 # 79881 # -1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.600 10_6 - 549 K_oxygenase PF13434.1 341 5.7e-06 19.5 0.1 1 3 0.0081 1.9 1.3 0.1 187 219 82 112 71 118 0.74 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 K_oxygenase PF13434.1 341 5.7e-06 19.5 0.1 2 3 1e-06 0.00024 14.2 0.0 130 231 204 296 188 320 0.81 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 K_oxygenase PF13434.1 341 5.7e-06 19.5 0.1 3 3 0.029 6.8 -0.5 0.0 125 160 316 353 298 363 0.65 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 4_9 - 578 ATP-synt_ab PF00006.20 215 1.5e-06 21.9 0.2 1 2 4.4e-05 0.01 9.4 0.0 3 36 23 57 22 171 0.86 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 ATP-synt_ab PF00006.20 215 1.5e-06 21.9 0.2 2 2 2.8e-05 0.0067 10.0 0.0 10 37 309 336 300 351 0.85 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_75 - 237 Cons_hypoth95 PF03602.10 183 0.0001 15.8 0.0 1 2 0.00035 0.083 6.4 0.0 112 127 24 39 3 83 0.75 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_75 - 237 Cons_hypoth95 PF03602.10 183 0.0001 15.8 0.0 2 2 0.00014 0.034 7.6 0.0 42 63 169 192 150 217 0.73 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_2 - 1457 AAA_19 PF13245.1 76 9.2e-06 19.5 0.1 1 1 3.5e-07 8.3e-05 16.5 0.1 10 59 1061 1110 1052 1123 0.82 # 600 # 4970 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_23 - 882 AAA_10 PF12846.2 304 7.2e-46 151.1 0.0 1 1 1.9e-47 1.1e-45 150.4 0.0 1 289 485 772 485 781 0.87 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 1_3 - 865 AAA_10 PF12846.2 304 3e-13 43.9 0.1 1 1 5.1e-14 3e-12 40.6 0.1 3 300 195 505 194 508 0.75 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 4_9 - 578 AAA_10 PF12846.2 304 6.4e-07 23.2 6.3 1 4 0.00021 0.013 9.1 0.0 4 79 39 130 36 153 0.65 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_10 PF12846.2 304 6.4e-07 23.2 6.3 2 4 0.014 0.85 3.0 0.1 220 287 174 247 160 261 0.79 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_10 PF12846.2 304 6.4e-07 23.2 6.3 3 4 0.00016 0.0094 9.5 0.3 6 24 319 337 315 346 0.86 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_10 PF12846.2 304 6.4e-07 23.2 6.3 4 4 0.028 1.7 2.1 0.1 153 264 356 488 341 493 0.68 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_94 - 126 AAA_10 PF12846.2 304 0.0012 12.4 0.0 1 1 2.9e-05 0.0017 11.9 0.0 243 262 5 24 2 40 0.89 # 78955 # 79332 # -1 # ID=1_94;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.561 10_6 - 549 FAD_oxidored PF12831.2 428 2.5e-05 17.6 3.1 1 2 1.1e-07 2.5e-05 17.6 3.1 2 39 88 124 87 155 0.84 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 FAD_oxidored PF12831.2 428 2.5e-05 17.6 3.1 2 2 0.016 3.8 0.5 0.0 85 119 293 326 246 352 0.67 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 DAO PF01266.19 358 2e-10 34.2 10.5 1 2 6.1e-08 1.4e-05 18.2 2.0 1 35 87 121 87 156 0.89 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 DAO PF01266.19 358 2e-10 34.2 10.5 2 2 1.1e-08 2.6e-06 20.6 1.3 151 239 301 387 269 466 0.76 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 1_75 - 237 Methyltransf_31 PF13847.1 152 0.00035 14.3 0.0 1 2 0.00068 0.08 6.6 0.0 57 118 9 86 4 120 0.75 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_75 - 237 Methyltransf_31 PF13847.1 152 0.00035 14.3 0.0 2 2 0.0013 0.15 5.7 0.0 4 38 170 201 167 203 0.83 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_55 - 307 Methyltransf_31 PF13847.1 152 0.00065 13.4 0.0 1 1 9.5e-06 0.0011 12.7 0.0 66 113 185 234 180 269 0.82 # 49243 # 50163 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 4_9 - 578 DUF2075 PF09848.4 352 0.002 11.2 0.0 1 2 3.9e-05 0.0093 9.0 0.0 3 69 38 103 36 149 0.80 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 DUF2075 PF09848.4 352 0.002 11.2 0.0 2 2 0.032 7.5 -0.5 0.0 6 35 319 351 315 373 0.70 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 2_15 - 145 PduV-EutP PF10662.4 143 0.0005 13.7 0.0 1 1 3.1e-06 0.00073 13.2 0.0 5 30 48 73 44 84 0.91 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_3 - 865 DUF815 PF05673.8 250 0.001 12.1 0.0 1 1 7e-06 0.0017 11.4 0.0 27 81 167 221 148 228 0.81 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 10_6 - 549 Pyr_redox PF00070.22 80 3.2e-19 63.3 5.9 1 2 7e-06 0.0017 12.9 1.5 1 31 87 117 87 119 0.96 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 Pyr_redox PF00070.22 80 3.2e-19 63.3 5.9 2 2 4.7e-18 1.1e-15 52.0 0.2 1 70 259 327 259 338 0.91 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 1_3 - 865 TrwB_AAD_bind PF10412.4 386 7.3e-142 466.6 0.0 1 1 7.6e-144 8.9e-142 466.3 0.0 2 386 180 568 179 568 0.99 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 1_23 - 882 TrwB_AAD_bind PF10412.4 386 2.8e-06 20.3 0.0 1 1 4.2e-08 5e-06 19.4 0.0 15 68 485 537 475 609 0.75 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 1_2 - 1457 AAA_11 PF13086.1 236 9.6e-06 19.4 0.1 1 2 0.0015 0.35 4.5 0.0 2 41 1045 1085 1044 1115 0.77 # 600 # 4970 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_2 - 1457 AAA_11 PF13086.1 236 9.6e-06 19.4 0.1 2 2 8e-06 0.0019 11.9 0.0 195 230 1142 1180 1130 1181 0.77 # 600 # 4970 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.597 4_9 - 578 Sigma54_activ_2 PF14532.1 138 0.0059 10.8 2.3 1 4 0.021 4.9 1.3 0.0 23 38 38 53 23 58 0.85 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 Sigma54_activ_2 PF14532.1 138 0.0059 10.8 2.3 2 4 0.092 22 -0.8 0.0 7 50 195 237 167 263 0.60 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 Sigma54_activ_2 PF14532.1 138 0.0059 10.8 2.3 3 4 0.0013 0.31 5.2 0.1 26 43 319 336 315 344 0.90 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 Sigma54_activ_2 PF14532.1 138 0.0059 10.8 2.3 4 4 0.049 12 0.1 0.0 76 101 452 478 401 491 0.57 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_3 - 865 T4SS-DNA_transf PF02534.9 469 7.3e-14 45.2 0.0 1 1 7.8e-16 1.8e-13 43.9 0.0 216 441 337 564 256 590 0.79 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 10_4 - 92 RRM_3 PF08777.6 105 0.00059 13.8 0.0 1 1 3e-06 0.00071 13.6 0.0 8 62 30 81 24 90 0.75 # 1030 # 1305 # 1 # ID=10_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.587 1_75 - 237 MethyltransfD12 PF02086.10 260 0.0032 11.0 0.0 1 2 0.0076 1.8 2.0 0.0 177 220 26 69 13 99 0.62 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_75 - 237 MethyltransfD12 PF02086.10 260 0.0032 11.0 0.0 2 2 0.00025 0.058 6.9 0.0 21 46 170 195 157 202 0.79 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_23 - 882 Pox_A32 PF04665.7 241 0.0024 11.3 0.0 1 1 2e-05 0.0046 10.3 0.0 11 38 483 510 475 520 0.87 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 1_55 - 307 Methyltransf_23 PF13489.1 161 0.001 12.9 0.0 1 1 7.1e-06 0.0017 12.2 0.0 74 115 186 231 80 253 0.63 # 49243 # 50163 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 4_9 - 578 RNA_helicase PF00910.17 107 1.8e-05 19.0 0.0 1 2 0.0036 0.85 4.0 0.0 1 18 39 56 39 77 0.80 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 RNA_helicase PF00910.17 107 1.8e-05 19.0 0.0 2 2 8.1e-06 0.0019 12.5 0.0 3 22 319 338 317 383 0.84 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 10_6 - 549 AlaDh_PNT_C PF01262.16 168 0.0029 11.3 5.2 1 2 0.0046 1.1 2.9 1.4 22 50 87 115 81 118 0.91 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 10_6 - 549 AlaDh_PNT_C PF01262.16 168 0.0029 11.3 5.2 2 2 4.3e-05 0.01 9.5 0.1 17 57 254 294 247 334 0.85 # 1550 # 3196 # 1 # ID=10_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634 1_60 - 137 tRNA_anti-codon PF01336.20 75 8.9e-05 16.5 0.0 1 2 0.023 5.4 1.1 0.0 43 62 61 80 51 83 0.80 # 54199 # 54609 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.509 1_60 - 137 tRNA_anti-codon PF01336.20 75 8.9e-05 16.5 0.0 2 2 1.9e-06 0.00044 14.2 0.0 3 68 71 129 69 135 0.82 # 54199 # 54609 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.509 1_60 - 137 BOF PF04076.8 103 7.2e-22 71.3 0.3 1 1 4.2e-24 9.9e-22 70.9 0.2 9 102 40 134 29 135 0.85 # 54199 # 54609 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.509 1_27 - 171 TIGR00922 TIGR00922 172 8.4e-09 29.3 0.0 1 1 1.7e-10 3.9e-08 27.1 0.0 1 138 4 130 4 156 0.83 # 29933 # 30445 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.600 4_9 - 578 NACHT PF05729.7 166 6.4e-05 16.8 1.1 1 2 0.0042 0.25 5.1 0.0 2 15 38 51 37 76 0.82 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 NACHT PF05729.7 166 6.4e-05 16.8 1.1 2 2 0.00029 0.017 8.9 0.1 2 22 316 336 315 347 0.88 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 2_15 - 145 NACHT PF05729.7 166 0.00027 14.8 0.0 1 1 6.4e-06 0.00038 14.3 0.0 3 28 47 72 45 88 0.87 # 12910 # 13344 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_23 - 882 NACHT PF05729.7 166 0.00082 13.2 0.2 1 2 0.0065 0.38 4.5 0.0 102 135 73 108 63 133 0.78 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 1_23 - 882 NACHT PF05729.7 166 0.00082 13.2 0.2 2 2 0.0027 0.16 5.7 0.1 3 24 488 509 487 516 0.88 # 25838 # 28483 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.565 1_3 - 865 NACHT PF05729.7 166 0.0013 12.5 0.0 1 1 0.00018 0.01 9.6 0.0 4 27 197 220 195 226 0.88 # 4967 # 7561 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 4_9 - 578 AAA_25 PF13481.1 194 2.1e-07 24.6 1.5 1 2 1.3e-05 0.003 11.1 0.0 29 55 33 58 7 74 0.79 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_25 PF13481.1 194 2.1e-07 24.6 1.5 2 2 1.2e-05 0.0027 11.2 0.1 29 56 311 337 286 414 0.82 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 1_75 - 237 Methyltransf_15 PF09445.5 164 6.3e-05 16.7 0.0 1 2 0.0013 0.3 4.7 0.0 52 80 9 36 4 73 0.86 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 1_75 - 237 Methyltransf_15 PF09445.5 164 6.3e-05 16.7 0.0 2 2 3e-05 0.0071 10.0 0.0 3 30 172 199 170 214 0.86 # 63603 # 64313 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.615 4_9 - 578 AAA_5 PF07728.9 139 7.2e-05 16.7 0.6 1 3 0.002 0.47 4.3 0.0 2 25 39 62 38 67 0.82 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_5 PF07728.9 139 7.2e-05 16.7 0.6 2 3 0.0002 0.047 7.5 0.1 4 23 319 338 317 350 0.86 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 4_9 - 578 AAA_5 PF07728.9 139 7.2e-05 16.7 0.6 3 3 0.031 7.4 0.4 0.0 61 92 439 472 417 479 0.74 # 8807 # 10540 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=3-4bp;gc_cont=0.607 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/23300f79-43f1-4c4d-a421-32f75560945b # Target file: checkm_output/bins/pm1326/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1326/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/23300f79-43f1-4c4d-a421-32f75560945b checkm_output/bins/pm1326/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:55:39 2020 # [ok]