# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_115 - 213 cobW PF02492.14 178 0.00066 12.5 0.1 1 1 8.4e-06 0.0011 11.7 0.1 2 38 51 87 50 113 0.76 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_21 - 369 FeoB_N PF02421.13 156 0.00063 12.4 1.2 1 1 1e-05 0.0014 11.3 1.2 2 127 20 154 19 178 0.74 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_110 - 419 Terminase_6 PF03237.10 384 1.5e-20 66.5 0.0 1 1 2.6e-22 1.8e-20 66.3 0.0 4 382 31 403 28 405 0.89 # 94648 # 95904 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_67 - 258 Terminase_6 PF03237.10 384 1.6e-05 17.1 0.0 1 2 0.00054 0.036 6.1 0.0 88 110 17 39 11 41 0.87 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 Terminase_6 PF03237.10 384 1.6e-05 17.1 0.0 2 2 7.1e-05 0.0048 9.0 0.0 6 64 78 135 76 198 0.68 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_47 - 359 IstB_IS21 PF01695.12 178 0.00022 14.0 0.0 1 1 7e-06 0.00047 12.9 0.0 52 81 56 85 51 100 0.83 # 35555 # 36631 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_67 - 258 IstB_IS21 PF01695.12 178 0.00031 13.5 0.3 1 1 2.6e-05 0.0018 11.0 0.2 52 70 74 92 50 99 0.86 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_85 - 222 MipZ PF09140.6 261 6.6e-18 58.0 0.3 1 1 3.6e-18 4.9e-16 51.8 0.3 2 150 4 133 3 145 0.84 # 68405 # 69070 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_21 - 369 AIG1 PF04548.11 212 2.6e-10 33.1 0.9 1 1 3.8e-12 5.1e-10 32.1 0.9 2 134 20 150 19 231 0.74 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_24 - 215 CoaE PF01121.15 180 2.5e-06 20.3 0.1 1 1 3.7e-08 5e-06 19.3 0.1 2 30 4 33 3 38 0.93 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_85 - 222 Methyltransf_18 PF12847.2 112 4.6e-05 17.3 0.0 1 1 6.4e-07 8.7e-05 16.5 0.0 22 78 31 89 21 157 0.81 # 68405 # 69070 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_67 - 258 DEAD_2 PF06733.10 174 0.001 11.8 0.0 1 1 1.2e-05 0.0016 11.2 0.0 143 165 169 191 147 199 0.80 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_21 - 369 Septin PF00735.13 281 5.9e-08 25.3 1.0 1 1 8e-09 1.1e-06 21.2 1.0 6 162 20 152 17 184 0.76 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_67 - 258 AAA_22 PF13401.1 131 5.2e-09 29.7 0.1 1 2 0.022 0.74 3.3 0.0 71 97 4 36 2 47 0.86 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 AAA_22 PF13401.1 131 5.2e-09 29.7 0.1 2 2 6.6e-08 2.2e-06 21.2 0.1 4 112 69 195 66 212 0.69 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 AAA_22 PF13401.1 131 3.2e-07 23.9 0.0 1 1 3e-08 1e-06 22.3 0.0 3 86 48 176 44 193 0.74 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 215 AAA_22 PF13401.1 131 0.00092 12.7 0.3 1 1 7.1e-05 0.0024 11.4 0.2 9 26 7 24 3 58 0.89 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_21 - 369 AAA_22 PF13401.1 131 0.00098 12.6 0.0 1 1 7.1e-05 0.0024 11.4 0.0 7 28 21 42 19 67 0.85 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_115 - 213 PRK PF00485.13 194 4.6e-05 16.3 0.0 1 1 1.3e-06 8.4e-05 15.5 0.0 1 39 51 88 51 106 0.77 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 215 PRK PF00485.13 194 0.00015 14.7 0.0 1 1 3e-06 0.0002 14.3 0.0 2 32 5 35 4 89 0.83 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_85 - 222 SRP54 PF00448.17 196 0.002 10.9 1.4 1 1 4.1e-05 0.0055 9.5 1.4 3 44 4 47 2 106 0.64 # 68405 # 69070 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_115 - 213 KAP_NTPase PF07693.9 325 5.2e-07 22.2 0.0 1 1 4.6e-09 6.2e-07 22.0 0.0 17 115 46 142 37 202 0.68 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 AAA_15 PF13175.1 415 0.0001 14.7 0.0 1 1 9.1e-07 0.00012 14.5 0.0 14 56 41 97 9 142 0.77 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 215 AAA_17 PF13207.1 121 3.9e-12 40.4 0.1 1 1 1.5e-13 5.2e-12 40.0 0.1 1 101 4 109 4 207 0.76 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_115 - 213 AAA_17 PF13207.1 121 5.9e-07 23.7 0.0 1 1 3.1e-08 1.1e-06 22.9 0.0 1 33 51 86 51 176 0.81 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_85 - 222 AAA_17 PF13207.1 121 0.00049 14.3 0.3 1 1 2.4e-05 0.00082 13.5 0.2 2 89 5 103 3 195 0.69 # 68405 # 69070 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_21 - 369 AAA_17 PF13207.1 121 0.0021 12.3 1.2 1 1 0.00015 0.0051 11.0 1.1 2 49 21 89 20 191 0.56 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_33 - 639 AAA_21 PF13304.1 303 3.3e-05 17.3 0.0 1 2 0.00093 0.063 6.5 0.0 8 22 42 56 41 97 0.88 # 25393 # 27309 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_33 - 639 AAA_21 PF13304.1 303 3.3e-05 17.3 0.0 2 2 0.00021 0.014 8.6 0.0 204 297 539 615 437 616 0.82 # 25393 # 27309 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_24 - 215 AAA_21 PF13304.1 303 0.0017 11.7 0.0 1 1 3.3e-05 0.0022 11.2 0.0 3 22 6 25 5 74 0.86 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_21 - 369 Miro PF08477.8 119 3.1e-08 27.5 0.3 1 1 8.7e-10 1.2e-07 25.6 0.3 2 118 21 142 20 143 0.60 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_115 - 213 MobB PF03205.9 140 4.1e-06 19.9 0.0 1 1 1.4e-07 9.6e-06 18.7 0.0 2 38 51 87 50 103 0.88 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 215 MobB PF03205.9 140 0.00068 12.7 0.0 1 1 1.8e-05 0.0012 11.8 0.0 2 20 4 22 3 31 0.91 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_118 - 520 Helicase_C PF00271.26 78 2.3e-14 46.4 0.0 1 1 5e-16 6.8e-14 44.9 0.0 2 78 387 463 386 463 0.97 # 100232 # 101791 # 1 # ID=1_118;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_85 - 222 ArsA_ATPase PF02374.10 305 0.00084 11.7 3.8 1 2 1.6e-05 0.0021 10.4 1.5 1 33 2 35 2 41 0.85 # 68405 # 69070 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_85 - 222 ArsA_ATPase PF02374.10 305 0.00084 11.7 3.8 2 2 0.0097 1.3 1.2 0.0 116 134 69 89 57 91 0.83 # 68405 # 69070 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_67 - 258 PhoH PF02562.11 205 5.9e-78 254.1 0.0 1 1 1.1e-79 7.1e-78 253.8 0.0 2 205 52 257 51 257 0.98 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_110 - 419 PhoH PF02562.11 205 0.0004 12.9 0.0 1 2 5.5e-05 0.0037 9.8 0.0 31 138 36 136 12 146 0.65 # 94648 # 95904 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_110 - 419 PhoH PF02562.11 205 0.0004 12.9 0.0 2 2 0.078 5.3 -0.5 0.0 65 106 351 392 340 396 0.78 # 94648 # 95904 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_21 - 369 Ras PF00071.17 162 4.9e-07 22.6 0.6 1 1 7.9e-09 1.1e-06 21.5 0.1 2 59 21 75 20 93 0.85 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_115 - 213 T2SE PF00437.15 272 0.00021 13.6 0.1 1 1 5.4e-06 0.00036 12.8 0.1 116 164 37 85 4 112 0.78 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_21 - 369 T2SE PF00437.15 272 0.00049 12.4 0.0 1 1 1.3e-05 0.00085 11.6 0.0 117 148 5 38 1 41 0.81 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_24 - 215 Cytidylate_kin2 PF13189.1 179 0.0002 14.6 0.2 1 1 2.6e-06 0.00035 13.8 0.0 2 32 5 35 4 86 0.91 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_115 - 213 Zeta_toxin PF06414.7 201 1.2e-05 17.8 0.0 1 2 2.8e-07 3.8e-05 16.2 0.0 14 52 47 85 37 98 0.81 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 Zeta_toxin PF06414.7 201 1.2e-05 17.8 0.0 2 2 0.066 8.9 -1.4 0.0 171 185 156 170 125 199 0.59 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_33 - 639 SMC_N PF02463.14 220 5e-15 48.6 0.4 1 1 1.3e-16 8.8e-15 47.8 0.4 32 200 41 618 3 635 0.91 # 25393 # 27309 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_115 - 213 SMC_N PF02463.14 220 4.7e-05 16.0 0.7 1 2 0.00081 0.055 6.0 0.1 25 41 50 66 37 73 0.81 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 SMC_N PF02463.14 220 4.7e-05 16.0 0.7 2 2 0.00013 0.009 8.5 0.1 136 204 126 192 70 208 0.68 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_85 - 222 VirC1 PF07015.6 231 2.6e-09 29.8 0.0 1 1 2.8e-11 3.8e-09 29.2 0.0 2 189 3 189 2 204 0.80 # 68405 # 69070 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_67 - 258 Arch_ATPase PF01637.13 234 4.1e-05 16.7 0.0 1 1 1e-06 6.9e-05 15.9 0.0 15 131 64 184 60 204 0.74 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 Arch_ATPase PF01637.13 234 0.00023 14.2 0.0 1 1 4.2e-06 0.00028 13.9 0.0 18 68 47 97 41 180 0.82 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 AAA_16 PF13191.1 185 2.6e-08 27.3 0.0 1 1 8.7e-10 3.9e-08 26.8 0.0 13 84 39 104 30 175 0.78 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 AAA_16 PF13191.1 185 4e-05 17.0 0.0 1 1 3e-06 0.00014 15.3 0.0 22 82 67 141 53 202 0.78 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_21 - 369 AAA_16 PF13191.1 185 4.5e-05 16.8 0.0 1 1 2e-06 9.1e-05 15.8 0.0 18 47 12 41 4 68 0.80 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_33 - 639 AAA_23 PF13476.1 202 8.5e-19 62.0 0.0 1 1 1.1e-19 7.4e-18 58.9 0.0 1 177 5 249 5 481 0.76 # 25393 # 27309 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_21 - 369 AAA_23 PF13476.1 202 0.025 8.2 9.5 1 1 0.00072 0.049 7.3 9.5 22 177 21 215 19 244 0.36 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_115 - 213 AAA_18 PF13238.1 129 2.1e-06 21.4 0.0 1 1 8.8e-08 4e-06 20.5 0.0 1 40 52 91 52 106 0.82 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 215 AAA_18 PF13238.1 129 2.6e-06 21.1 0.1 1 1 8.9e-08 4e-06 20.5 0.1 1 22 5 26 5 107 0.81 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_21 - 369 AAA_18 PF13238.1 129 0.00085 13.0 0.7 1 1 3.4e-05 0.0015 12.2 0.3 1 75 21 101 21 144 0.66 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_85 - 222 CbiA PF01656.18 195 4e-18 58.8 0.1 1 1 8.3e-20 5.6e-18 58.3 0.1 1 170 5 158 5 186 0.73 # 68405 # 69070 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_115 - 213 CbiA PF01656.18 195 0.00059 12.6 0.1 1 1 1.2e-05 0.00084 12.1 0.1 2 48 52 101 51 195 0.72 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_21 - 369 IIGP PF05049.8 376 0.00012 14.3 1.2 1 2 2.2e-06 0.0003 12.9 0.2 20 55 5 38 2 60 0.83 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_21 - 369 IIGP PF05049.8 376 0.00012 14.3 1.2 2 2 0.035 4.7 -0.8 0.0 216 264 203 253 188 284 0.68 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_80 - 447 KaiC PF06745.8 227 1.9e-10 33.6 0.4 1 3 0.032 2.2 0.6 0.0 120 162 74 119 27 179 0.65 # 63721 # 65061 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.550 1_80 - 447 KaiC PF06745.8 227 1.9e-10 33.6 0.4 2 3 8.7e-11 5.9e-09 28.7 0.0 2 69 191 258 190 392 0.63 # 63721 # 65061 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.550 1_80 - 447 KaiC PF06745.8 227 1.9e-10 33.6 0.4 3 3 0.019 1.3 1.4 0.1 65 136 342 411 335 420 0.61 # 63721 # 65061 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.550 1_47 - 359 KaiC PF06745.8 227 4.2e-05 16.1 0.0 1 1 1.1e-06 7.1e-05 15.3 0.0 13 46 45 78 20 98 0.77 # 35555 # 36631 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_67 - 258 AAA_14 PF13173.1 128 4.9e-06 19.8 0.0 1 1 5.7e-06 0.00025 14.3 0.0 6 96 73 205 68 220 0.61 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 AAA_14 PF13173.1 128 0.0004 13.6 0.0 1 1 2.4e-05 0.0011 12.2 0.0 2 45 49 91 48 124 0.72 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 215 AAA_14 PF13173.1 128 0.0013 12.0 0.0 1 1 6.3e-05 0.0028 10.9 0.0 5 27 5 26 2 40 0.77 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_21 - 369 TIGR03594 TIGR03594 432 1.9e-11 36.6 1.8 1 1 2.6e-13 3.5e-11 35.7 1.8 177 313 20 159 6 252 0.70 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_115 - 213 AAA_29 PF13555.1 62 1.2e-07 24.6 0.0 1 1 8.7e-09 2.9e-07 23.3 0.0 8 40 35 66 32 70 0.91 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_33 - 639 AAA_29 PF13555.1 62 0.0001 15.1 0.1 1 1 1.9e-05 0.00064 12.6 0.0 31 51 41 61 4 66 0.81 # 25393 # 27309 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_21 - 369 AAA_29 PF13555.1 62 0.00026 13.8 0.0 1 1 2.2e-05 0.00075 12.4 0.0 25 42 20 37 9 40 0.80 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_24 - 215 AAA_29 PF13555.1 62 0.0009 12.1 0.0 1 1 5.4e-05 0.0018 11.2 0.0 28 39 7 18 2 28 0.81 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_67 - 258 AAA PF00004.24 132 5e-05 16.9 0.4 1 1 6.1e-06 0.00041 13.9 0.2 4 22 75 95 73 205 0.71 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 215 AAA PF00004.24 132 0.00032 14.2 0.0 1 1 8.4e-06 0.00057 13.4 0.0 3 38 7 45 5 75 0.79 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_115 - 213 Sigma54_activat PF00158.21 168 0.00021 14.1 0.1 1 2 1.2e-05 0.0016 11.3 0.0 16 49 43 76 30 92 0.79 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 Sigma54_activat PF00158.21 168 0.00021 14.1 0.1 2 2 0.026 3.5 0.4 0.1 131 150 174 194 155 208 0.67 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_21 - 369 MMR_HSR1 PF01926.18 116 1.7e-11 37.5 0.6 1 1 2.4e-13 3.2e-11 36.6 0.6 2 116 21 141 20 141 0.71 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_12 - 562 N6_Mtase PF02384.11 311 4.6e-05 15.9 0.0 1 2 0.00071 0.096 5.0 0.0 27 65 400 439 394 445 0.89 # 5665 # 7350 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_12 - 562 N6_Mtase PF02384.11 311 4.6e-05 15.9 0.0 2 2 9.4e-05 0.013 7.9 0.0 122 146 479 503 462 536 0.82 # 5665 # 7350 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_21 - 369 DUF258 PF03193.11 161 7.1e-07 21.9 0.2 1 1 3.2e-08 2.2e-06 20.3 0.2 37 116 20 92 6 102 0.75 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_115 - 213 DUF258 PF03193.11 161 1.5e-05 17.5 0.0 1 1 3.9e-07 2.7e-05 16.7 0.0 25 85 38 111 14 119 0.77 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_85 - 222 AAA_31 PF13614.1 157 1.7e-09 31.1 0.1 1 2 3.6e-06 0.00049 13.4 0.0 1 36 3 39 3 60 0.84 # 68405 # 69070 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_85 - 222 AAA_31 PF13614.1 157 1.7e-09 31.1 0.1 2 2 7.8e-07 0.00011 15.5 0.0 105 151 69 114 54 120 0.76 # 68405 # 69070 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.494 1_115 - 213 NTPase_1 PF03266.10 168 4.7e-05 16.5 0.1 1 2 4.7e-06 0.00032 13.8 0.0 2 31 52 81 51 103 0.95 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 NTPase_1 PF03266.10 168 4.7e-05 16.5 0.1 2 2 0.077 5.2 0.1 0.0 94 136 143 189 124 210 0.55 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 215 NTPase_1 PF03266.10 168 0.00074 12.6 0.0 1 1 2.3e-05 0.0016 11.5 0.0 1 17 4 20 4 26 0.88 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_115 - 213 AAA_33 PF13671.1 143 0.00044 13.5 0.1 1 1 5.4e-06 0.00072 12.8 0.1 1 33 51 94 51 208 0.69 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 KTI12 PF08433.5 270 8e-07 21.8 0.1 1 2 1.4e-07 1.9e-05 17.3 0.0 4 40 52 88 50 104 0.89 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 KTI12 PF08433.5 270 8e-07 21.8 0.1 2 2 0.0043 0.58 2.6 0.0 187 218 149 180 136 209 0.65 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_80 - 447 DnaB_C PF03796.10 259 2.6e-12 39.4 0.2 1 1 3e-14 4e-12 38.8 0.2 2 251 190 433 189 441 0.76 # 63721 # 65061 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.550 1_12 - 562 Methyltransf_26 PF13659.1 117 1.2e-08 28.4 0.0 1 1 1.7e-10 2.2e-08 27.5 0.0 2 116 422 519 421 520 0.86 # 5665 # 7350 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_67 - 258 AAA_30 PF13604.1 196 2.1e-08 27.3 0.9 1 1 3.1e-09 2.1e-07 24.0 0.9 7 133 60 210 55 219 0.82 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 AAA_30 PF13604.1 196 6e-05 16.0 0.7 1 1 3.8e-06 0.00026 13.9 0.7 17 50 48 81 42 190 0.84 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 FtsK_SpoIIIE PF01580.13 205 0.00027 13.8 0.0 1 2 7e-06 0.00095 12.0 0.0 18 58 28 69 16 73 0.81 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 FtsK_SpoIIIE PF01580.13 205 0.00027 13.8 0.0 2 2 0.055 7.5 -0.7 0.0 175 200 159 184 89 197 0.71 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_12 - 562 MTS PF05175.9 170 0.00057 12.6 0.0 1 1 9.3e-06 0.0013 11.5 0.0 97 140 481 518 415 530 0.86 # 5665 # 7350 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_21 - 369 Dynamin_N PF00350.18 168 3.2e-08 26.9 0.4 1 2 1.1e-09 1.4e-07 24.8 0.2 1 75 21 96 21 111 0.67 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_21 - 369 Dynamin_N PF00350.18 168 3.2e-08 26.9 0.4 2 2 0.032 4.3 0.4 0.0 104 130 67 94 65 171 0.53 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_47 - 359 RecA PF00154.16 323 1.5e-47 155.5 0.0 1 1 2.2e-49 2.9e-47 154.5 0.0 22 281 16 306 10 329 0.80 # 35555 # 36631 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_115 - 213 ABC_tran PF00005.22 137 1.6e-14 47.7 0.1 1 2 7.9e-10 3.6e-08 27.1 0.0 1 38 39 76 39 98 0.87 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 ABC_tran PF00005.22 137 1.6e-14 47.7 0.1 2 2 2.8e-07 1.3e-05 18.9 0.0 79 134 97 152 78 155 0.74 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_33 - 639 ABC_tran PF00005.22 137 1.1e-06 22.4 5.3 1 2 0.00052 0.024 8.3 0.1 19 32 41 54 40 78 0.87 # 25393 # 27309 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_33 - 639 ABC_tran PF00005.22 137 1.1e-06 22.4 5.3 2 2 4.1e-06 0.00018 15.1 0.1 54 126 456 565 418 569 0.65 # 25393 # 27309 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_24 - 215 ABC_tran PF00005.22 137 0.00031 14.4 0.0 1 1 1.4e-05 0.00064 13.4 0.0 13 33 4 24 2 34 0.89 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_115 - 213 ATP-synt_ab PF00006.20 215 0.00082 12.2 0.1 1 1 8.9e-06 0.0012 11.7 0.1 13 48 47 82 42 192 0.71 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 DUF2791 PF10923.3 417 0.0002 13.3 0.1 1 1 2.7e-06 0.00036 12.5 0.0 26 84 27 84 23 113 0.83 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 AAA_19 PF13245.1 76 2.5e-05 17.3 0.7 1 1 9e-07 4e-05 16.7 0.1 10 42 69 100 61 115 0.75 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 215 AAA_19 PF13245.1 76 0.00064 12.8 1.6 1 1 3e-05 0.0014 11.8 0.2 15 35 7 26 4 49 0.83 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_110 - 419 AAA_19 PF13245.1 76 0.00099 12.2 0.0 1 1 4.5e-05 0.002 11.2 0.0 22 58 36 70 20 94 0.79 # 94648 # 95904 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_67 - 258 Helicase_RecD PF05127.9 177 0.00087 12.3 0.4 1 2 0.01 1.4 1.8 0.0 90 103 26 39 3 42 0.70 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 Helicase_RecD PF05127.9 177 0.00087 12.3 0.4 2 2 0.0002 0.027 7.4 0.1 3 46 75 119 73 203 0.54 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 AAA_10 PF12846.2 304 3.4e-06 20.0 0.4 1 2 4.9e-06 0.00016 14.4 0.0 6 38 54 87 51 105 0.81 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 AAA_10 PF12846.2 304 3.4e-06 20.0 0.4 2 2 0.0075 0.25 4.0 0.1 216 260 140 184 95 192 0.78 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_21 - 369 AAA_10 PF12846.2 304 1.6e-05 17.7 1.0 1 1 1e-06 3.4e-05 16.7 1.0 2 38 19 72 19 262 0.61 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_67 - 258 AAA_10 PF12846.2 304 0.00043 13.1 0.0 1 1 0.00025 0.0083 8.8 0.0 2 97 70 198 69 200 0.57 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_33 - 639 AAA_10 PF12846.2 304 0.018 7.7 6.7 1 2 0.0013 0.045 6.4 0.9 9 24 41 59 39 266 0.90 # 25393 # 27309 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_33 - 639 AAA_10 PF12846.2 304 0.018 7.7 6.7 2 2 0.0069 0.23 4.1 0.5 101 261 467 616 348 629 0.77 # 25393 # 27309 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_33 - 639 SbcCD_C PF13558.1 90 1.4e-07 24.8 0.1 1 1 2.6e-09 3.4e-07 23.5 0.1 12 89 532 601 524 602 0.86 # 25393 # 27309 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_118 - 520 ResIII PF04851.10 184 9.7e-18 57.9 0.0 1 1 1.3e-19 1.8e-17 57.1 0.0 26 183 112 268 97 269 0.81 # 100232 # 101791 # 1 # ID=1_118;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_67 - 258 Zot PF05707.7 193 2.6e-06 20.3 0.0 1 1 3.2e-08 4.3e-06 19.6 0.0 2 95 71 187 70 208 0.75 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 Viral_helicase1 PF01443.13 234 3.1e-05 16.9 0.0 1 2 0.00096 0.13 5.0 0.0 4 21 75 92 72 119 0.78 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 Viral_helicase1 PF01443.13 234 3.1e-05 16.9 0.0 2 2 5.3e-05 0.0071 9.2 0.0 62 107 171 217 155 244 0.86 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 DUF2075 PF09848.4 352 1.9e-05 17.1 0.0 1 1 4.5e-07 3.1e-05 16.4 0.0 3 101 71 189 69 206 0.73 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 DUF2075 PF09848.4 352 9.1e-05 14.8 0.2 1 1 3.4e-06 0.00023 13.5 0.0 3 28 51 76 49 107 0.81 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_118 - 520 DEAD PF00270.24 169 1e-13 44.5 0.2 1 2 1.3e-13 8.9e-12 38.1 0.0 2 163 99 268 98 275 0.69 # 100232 # 101791 # 1 # ID=1_118;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_118 - 520 DEAD PF00270.24 169 1e-13 44.5 0.2 2 2 0.0073 0.49 3.2 0.0 64 102 384 425 376 428 0.76 # 100232 # 101791 # 1 # ID=1_118;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_110 - 419 DEAD PF00270.24 169 0.00029 13.7 0.0 1 1 1.5e-05 0.001 11.9 0.0 25 132 35 130 14 154 0.76 # 94648 # 95904 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_115 - 213 DUF815 PF05673.8 250 1.5e-05 17.4 0.0 1 1 3.4e-07 2.3e-05 16.7 0.0 32 104 30 100 8 106 0.83 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_21 - 369 DUF815 PF05673.8 250 0.00013 14.3 0.0 1 1 3.7e-06 0.00025 13.3 0.0 48 75 13 40 5 63 0.88 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_12 - 562 Methyltransf_27 PF13708.1 194 1.5e-45 148.4 2.6 1 2 3.1e-47 4.2e-45 147.0 2.3 3 194 87 300 85 300 0.91 # 5665 # 7350 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_12 - 562 Methyltransf_27 PF13708.1 194 1.5e-45 148.4 2.6 2 2 0.089 12 -1.3 0.0 107 135 347 375 321 385 0.78 # 5665 # 7350 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_115 - 213 Sigma54_activ_2 PF14532.1 138 2.8e-05 17.5 0.0 1 1 3.3e-07 4.5e-05 16.9 0.0 10 95 38 143 33 193 0.70 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_110 - 419 Terminase_3 PF04466.8 387 1e-07 24.6 0.0 1 2 2.1e-09 2.8e-07 23.2 0.0 2 123 24 143 23 161 0.91 # 94648 # 95904 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_110 - 419 Terminase_3 PF04466.8 387 1e-07 24.6 0.0 2 2 0.08 11 -1.8 0.0 343 385 363 402 340 404 0.64 # 94648 # 95904 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_12 - 562 TIGR00755 TIGR00755 256 6e-05 15.4 0.0 1 1 1.1e-06 0.00015 14.1 0.0 15 106 406 494 393 507 0.85 # 5665 # 7350 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_115 - 213 ArgK PF03308.11 267 2.1e-05 16.7 0.0 1 1 2.7e-07 3.6e-05 15.9 0.0 26 63 46 83 15 85 0.86 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 PIF1 PF05970.9 364 5.4e-05 15.5 0.0 1 1 6.3e-07 8.6e-05 14.9 0.0 18 55 45 82 31 85 0.86 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 RNA_helicase PF00910.17 107 0.00011 15.7 0.1 1 1 1.4e-05 0.00061 13.3 0.1 1 26 52 77 52 120 0.81 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 RNA_helicase PF00910.17 107 0.0008 12.9 0.0 1 2 0.0004 0.018 8.6 0.0 3 23 74 94 72 111 0.73 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 RNA_helicase PF00910.17 107 0.0008 12.9 0.0 2 2 0.045 2 2.0 0.0 49 85 171 204 161 209 0.68 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_21 - 369 RNA_helicase PF00910.17 107 0.0011 12.5 1.2 1 1 0.00017 0.0079 9.7 0.5 1 64 21 119 21 143 0.70 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_115 - 213 UPF0079 PF02367.12 123 5.2e-06 19.5 0.0 1 1 7.5e-08 1e-05 18.5 0.0 9 47 43 82 36 93 0.87 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_110 - 419 Terminase_GpA PF05876.7 557 3.6e-05 15.5 0.0 1 1 4.5e-07 6.1e-05 14.8 0.0 34 149 25 132 10 136 0.78 # 94648 # 95904 # -1 # ID=1_110;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_115 - 213 NACHT PF05729.7 166 4.7e-05 16.4 0.0 1 1 2.3e-06 0.0001 15.3 0.0 2 31 51 80 50 111 0.82 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 NACHT PF05729.7 166 0.00073 12.5 0.0 1 1 3.5e-05 0.0016 11.4 0.0 5 22 74 91 71 100 0.86 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_24 - 215 NACHT PF05729.7 166 0.00091 12.2 0.0 1 1 4.5e-05 0.002 11.1 0.0 4 20 6 22 3 26 0.87 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_80 - 447 AAA_25 PF13481.1 194 2.2e-13 43.3 0.1 1 1 3.9e-14 1.1e-12 41.1 0.0 14 193 189 372 175 373 0.77 # 63721 # 65061 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.550 1_47 - 359 AAA_25 PF13481.1 194 5.6e-07 22.4 0.0 1 1 9.7e-08 2.6e-06 20.3 0.0 13 157 27 157 18 216 0.68 # 35555 # 36631 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_33 - 639 AAA_25 PF13481.1 194 7.1e-05 15.6 0.5 1 1 1.6e-05 0.00042 13.1 0.0 39 139 39 137 29 143 0.71 # 25393 # 27309 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.537 1_115 - 213 AAA_25 PF13481.1 194 0.00026 13.7 0.1 1 2 0.00013 0.0035 10.0 0.0 19 50 31 66 15 89 0.76 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_115 - 213 AAA_25 PF13481.1 194 0.00026 13.7 0.1 2 2 0.058 1.6 1.4 0.1 165 185 162 182 144 186 0.80 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 1_67 - 258 AAA_25 PF13481.1 194 0.00063 12.5 0.5 1 1 0.00011 0.0029 10.3 0.1 35 63 71 99 59 113 0.81 # 53023 # 53796 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_118 - 520 SNF2_N PF00176.18 299 3.8e-05 15.9 0.0 1 1 4.6e-07 6.2e-05 15.2 0.0 105 182 185 277 168 285 0.81 # 100232 # 101791 # 1 # ID=1_118;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_24 - 215 AAA_28 PF13521.1 163 4.7e-11 36.2 0.0 1 1 9.9e-13 6.7e-11 35.7 0.0 1 98 4 98 4 157 0.80 # 16656 # 17300 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.547 1_21 - 369 AAA_28 PF13521.1 163 6.7e-05 16.2 0.6 1 2 0.00025 0.017 8.4 0.2 2 121 21 174 20 202 0.60 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_21 - 369 AAA_28 PF13521.1 163 6.7e-05 16.2 0.6 2 2 0.0059 0.4 3.9 0.0 18 83 195 258 189 264 0.72 # 14476 # 15582 # 1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.380 1_47 - 359 Rad51 PF08423.6 256 5.4e-05 15.5 0.0 1 2 5.5e-06 0.00074 11.8 0.0 31 84 44 91 28 135 0.86 # 35555 # 36631 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_47 - 359 Rad51 PF08423.6 256 5.4e-05 15.5 0.0 2 2 0.0078 1 1.4 0.0 169 207 195 230 161 262 0.78 # 35555 # 36631 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_57 - 412 AAA_5 PF07728.9 139 1.7e-17 56.8 0.0 1 1 2.2e-19 3e-17 56.0 0.0 4 126 173 293 172 309 0.92 # 45379 # 46614 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.535 1_115 - 213 APS_kinase PF01583.15 157 4.8e-07 22.9 0.0 1 1 7e-09 9.4e-07 21.9 0.0 1 38 48 85 48 104 0.88 # 98163 # 98801 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/4b01aa8c-ff94-4eb9-a224-3bb119677a28 # Target file: checkm_output/bins/pm1308/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1308/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4b01aa8c-ff94-4eb9-a224-3bb119677a28 checkm_output/bins/pm1308/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:55:27 2020 # [ok]