# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_44 - 566 3HCDH_N PF02737.13 180 0.016 7.8 6.4 1 2 0.0087 0.91 2.1 2.8 1 30 100 129 100 133 0.93 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 3HCDH_N PF02737.13 180 0.016 7.8 6.4 2 2 0.00032 0.033 6.8 0.1 2 37 273 308 272 347 0.75 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 GIDA PF01134.17 392 2.7e-06 19.4 5.3 1 2 2.6e-08 2.7e-06 19.4 5.3 1 53 100 154 100 290 0.87 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 GIDA PF01134.17 392 2.7e-06 19.4 5.3 2 2 0.018 1.9 0.1 0.1 349 385 394 430 388 434 0.77 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_89 - 145 SSB PF00436.20 104 7.6e-32 102.3 0.2 1 1 8.4e-34 8.7e-32 102.1 0.2 2 103 7 111 6 112 0.96 # 76284 # 76718 # -1 # ID=1_89;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_44 - 566 Pyr_redox_2 PF07992.9 201 2e-43 141.5 0.0 1 1 1e-44 1e-42 139.2 0.0 1 199 100 411 100 413 0.96 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_80 - 388 DUF87 PF01935.12 229 9.7e-05 15.2 0.0 1 1 1.8e-06 0.00019 14.2 0.0 28 45 157 174 155 188 0.89 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_49 - 331 AAA_22 PF13401.1 131 5.3e-17 55.2 0.0 1 1 2.8e-18 9.7e-17 54.3 0.0 7 126 64 190 59 194 0.94 # 35528 # 36520 # 1 # ID=1_49;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 1_80 - 388 AAA_22 PF13401.1 131 4.3e-06 19.9 0.0 1 1 2.9e-07 1e-05 18.7 0.0 4 30 152 178 149 243 0.84 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_67 - 1017 AAA_22 PF13401.1 131 0.00036 13.7 0.0 1 1 3.5e-05 0.0012 11.9 0.0 8 69 492 557 486 594 0.67 # 56140 # 59190 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_80 - 388 ATP_bind_1 PF03029.12 238 0.00085 11.8 0.0 1 1 1.3e-05 0.0014 11.2 0.0 1 25 157 181 157 191 0.84 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_44 - 566 Trp_halogenase PF04820.9 454 0.0049 8.4 3.3 1 1 8.2e-05 0.0085 7.6 3.3 1 47 100 143 100 151 0.76 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 NAD_binding_7 PF13241.1 103 5e-06 19.7 0.9 1 2 1.9e-05 0.0019 11.4 0.2 9 38 100 129 96 164 0.90 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 NAD_binding_7 PF13241.1 103 5e-06 19.7 0.9 2 2 0.00077 0.08 6.2 0.0 8 41 271 307 264 380 0.74 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_67 - 1017 AAA_17 PF13207.1 121 4.5e-05 17.2 0.0 1 1 2.9e-06 0.0003 14.6 0.0 3 28 492 523 492 587 0.67 # 56140 # 59190 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_80 - 388 Miro PF08477.8 119 0.00098 12.6 0.0 1 1 2.1e-05 0.0022 11.5 0.0 4 28 157 186 156 220 0.72 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_80 - 388 MobB PF03205.9 140 0.00055 12.6 0.0 1 1 1e-05 0.0011 11.7 0.0 4 25 156 177 154 190 0.85 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_80 - 388 T2SE PF00437.15 272 2.3e-23 75.4 0.0 1 1 3.4e-25 3.5e-23 74.8 0.0 11 269 24 303 15 306 0.78 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_44 - 566 NAD_binding_8 PF13450.1 68 7.2e-05 15.8 1.2 1 1 6.9e-07 7.2e-05 15.8 1.2 1 35 103 136 103 155 0.91 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_80 - 388 SMC_N PF02463.14 220 0.0011 11.2 0.0 1 1 1.8e-05 0.0018 10.4 0.0 25 50 153 178 146 195 0.81 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_49 - 331 AAA_16 PF13191.1 185 2.1e-05 17.5 0.0 1 1 5.9e-06 0.00031 13.7 0.0 8 103 45 145 43 186 0.62 # 35528 # 36520 # 1 # ID=1_49;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 1_80 - 388 AAA_16 PF13191.1 185 0.00066 12.6 0.0 1 1 2.5e-05 0.0013 11.7 0.0 25 50 153 178 141 211 0.84 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_80 - 388 AAA_23 PF13476.1 202 2.5e-06 20.9 0.8 1 1 3.9e-08 4e-06 20.2 0.2 19 44 152 177 122 198 0.85 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_67 - 1017 AAA_18 PF13238.1 129 5.4e-05 16.5 0.1 1 1 4.2e-06 0.00043 13.6 0.0 2 19 492 509 492 562 0.79 # 56140 # 59190 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_80 - 388 KaiC PF06745.8 227 0.0008 11.5 0.0 1 1 1.4e-05 0.0014 10.7 0.0 11 59 144 191 137 201 0.76 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_44 - 566 HI0933_like PF03486.9 409 2.6e-08 25.6 3.8 1 2 4.3e-07 4.5e-05 15.0 2.8 2 33 100 131 99 139 0.91 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 HI0933_like PF03486.9 409 2.6e-08 25.6 3.8 2 2 2.2e-05 0.0023 9.3 0.0 84 164 287 367 281 386 0.80 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_80 - 388 AAA_29 PF13555.1 62 8.8e-06 18.2 0.1 1 1 2e-07 2.1e-05 17.0 0.1 25 43 154 172 146 175 0.84 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_44 - 566 FAD_binding_2 PF00890.19 417 1e-06 20.8 5.3 1 3 9.6e-09 1e-06 20.8 5.3 2 32 101 131 100 138 0.91 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 FAD_binding_2 PF00890.19 417 1e-06 20.8 5.3 2 3 0.017 1.8 0.2 0.3 141 204 310 370 290 390 0.76 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 FAD_binding_2 PF00890.19 417 1e-06 20.8 5.3 3 3 0.081 8.4 -2.0 0.0 376 402 389 409 380 424 0.83 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 Thi4 PF01946.12 230 0.0003 12.9 0.4 1 1 6.4e-06 0.00067 11.7 0.4 19 70 100 150 95 158 0.88 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 Pyr_redox_3 PF13738.1 203 3.5e-17 56.1 0.1 1 3 1.5e-06 0.00016 14.8 0.0 164 199 95 130 48 134 0.85 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 Pyr_redox_3 PF13738.1 203 3.5e-17 56.1 0.1 2 3 5.9e-09 6.1e-07 22.6 0.0 115 201 219 304 174 306 0.81 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 Pyr_redox_3 PF13738.1 203 3.5e-17 56.1 0.1 3 3 1.3e-06 0.00013 15.0 0.0 100 147 331 376 310 431 0.76 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_49 - 331 TniB PF05621.6 302 2.2e-201 659.8 5.7 1 1 2.6e-203 2.7e-201 659.6 5.7 1 287 1 287 1 300 0.98 # 35528 # 36520 # 1 # ID=1_49;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 1_80 - 388 Ribosomal_S5 PF00333.15 67 3.3e-05 16.6 0.1 1 2 0.00093 0.096 5.5 0.0 26 45 84 103 77 114 0.83 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_80 - 388 Ribosomal_S5 PF00333.15 67 3.3e-05 16.6 0.1 2 2 0.00012 0.012 8.4 0.0 21 54 242 274 230 278 0.91 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_32 - 696 TraG-D_C PF12696.2 128 0.00014 14.7 0.1 1 1 2.4e-06 0.00025 13.9 0.1 3 94 437 524 435 556 0.78 # 18589 # 20676 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_80 - 388 FtsK_SpoIIIE PF01580.13 205 0.00011 14.7 0.0 1 1 2.1e-06 0.00022 13.7 0.0 41 59 155 173 135 184 0.85 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_80 - 388 ABC_tran PF00005.22 137 0.00012 15.4 0.0 1 1 2.2e-06 0.00023 14.5 0.0 15 33 156 174 147 217 0.82 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_44 - 566 K_oxygenase PF13434.1 341 6.2e-06 18.2 0.1 1 3 0.0041 0.43 2.3 0.2 187 223 95 129 86 132 0.74 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 K_oxygenase PF13434.1 341 6.2e-06 18.2 0.1 2 3 2.8e-06 0.00029 12.7 0.0 130 231 217 309 198 340 0.79 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 K_oxygenase PF13434.1 341 6.2e-06 18.2 0.1 3 3 0.07 7.3 -1.7 0.0 135 160 350 370 319 377 0.68 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_67 - 1017 AAA_19 PF13245.1 76 0.00038 13.2 0.0 1 1 1.2e-05 0.0012 11.6 0.0 14 32 492 509 481 523 0.86 # 56140 # 59190 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_67 - 1017 AAA_10 PF12846.2 304 7.8e-42 136.6 0.0 1 1 4.6e-43 1.6e-41 135.6 0.0 5 297 492 884 489 889 0.94 # 56140 # 59190 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_32 - 696 AAA_10 PF12846.2 304 6.5e-10 31.8 0.0 1 1 2.8e-11 9.7e-10 31.2 0.0 2 292 134 503 133 514 0.76 # 18589 # 20676 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_80 - 388 AAA_10 PF12846.2 304 1.3e-06 21.0 0.0 1 1 2.1e-07 7.3e-06 18.5 0.0 2 27 153 178 152 196 0.74 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_44 - 566 FAD_oxidored PF12831.2 428 6.2e-07 21.7 3.8 1 2 6e-09 6.2e-07 21.7 3.8 1 41 100 139 100 159 0.83 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 FAD_oxidored PF12831.2 428 6.2e-07 21.7 3.8 2 2 0.017 1.8 0.4 0.0 84 118 305 338 261 369 0.70 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 DAO PF01266.19 358 8.8e-11 34.2 7.6 1 2 1.9e-08 2e-06 19.9 1.5 2 35 101 134 100 161 0.85 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 DAO PF01266.19 358 8.8e-11 34.2 7.6 2 2 9.3e-08 9.7e-06 17.6 0.5 151 229 314 394 274 535 0.79 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_67 - 1017 DUF2075 PF09848.4 352 0.00038 12.4 0.0 1 1 1e-05 0.0011 10.9 0.0 5 22 492 509 489 526 0.84 # 56140 # 59190 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_44 - 566 NAD_binding_9 PF13454.1 156 0.00024 13.8 2.7 1 3 0.016 1.7 1.4 0.1 1 41 102 136 102 163 0.79 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 NAD_binding_9 PF13454.1 156 0.00024 13.8 2.7 2 3 0.059 6.2 -0.5 0.0 134 155 219 242 197 243 0.66 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 NAD_binding_9 PF13454.1 156 0.00024 13.8 2.7 3 3 2.1e-05 0.0022 10.8 0.1 112 155 322 367 312 368 0.81 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 Pyr_redox PF00070.22 80 1.1e-19 63.6 5.8 1 2 1.3e-06 0.00013 15.3 1.5 2 31 101 130 100 132 0.95 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 Pyr_redox PF00070.22 80 1.1e-19 63.6 5.8 2 2 2.5e-17 2.6e-15 49.6 0.2 1 74 272 346 272 355 0.90 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_99 - 287 Methyltransf_27 PF13708.1 194 6.3e-69 224.3 0.0 1 1 1e-70 1.1e-68 223.6 0.0 2 194 89 282 88 282 0.98 # 80387 # 81247 # -1 # ID=1_99;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.523 1_32 - 696 TrwB_AAD_bind PF10412.4 386 1.9e-06 19.6 0.9 1 3 1.7e-05 0.0018 9.8 0.0 16 36 134 154 125 158 0.88 # 18589 # 20676 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_32 - 696 TrwB_AAD_bind PF10412.4 386 1.9e-06 19.6 0.9 2 3 9.3e-05 0.0097 7.4 0.1 93 140 235 281 229 303 0.80 # 18589 # 20676 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_32 - 696 TrwB_AAD_bind PF10412.4 386 1.9e-06 19.6 0.9 3 3 0.083 8.6 -2.3 0.0 293 323 482 512 405 546 0.58 # 18589 # 20676 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_49 - 331 AAA_32 PF13654.1 509 9.8e-05 14.0 0.0 1 2 8.6e-06 0.00089 10.9 0.0 8 81 34 112 26 124 0.86 # 35528 # 36520 # 1 # ID=1_49;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 1_49 - 331 AAA_32 PF13654.1 509 9.8e-05 14.0 0.0 2 2 0.01 1 0.8 0.0 472 504 255 287 242 290 0.90 # 35528 # 36520 # 1 # ID=1_49;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.649 1_80 - 388 GTP_EFTU PF00009.22 188 0.0011 11.3 0.0 1 1 2e-05 0.002 10.5 0.0 8 34 157 183 155 195 0.87 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_80 - 388 RNA_helicase PF00910.17 107 0.0011 12.1 0.0 1 1 2.5e-05 0.0026 10.9 0.0 3 26 157 180 156 197 0.81 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_44 - 566 AlaDh_PNT_C PF01262.16 168 7.9e-07 21.7 2.1 1 2 4e-06 0.00041 12.9 0.3 16 50 94 128 80 131 0.87 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_44 - 566 AlaDh_PNT_C PF01262.16 168 7.9e-07 21.7 2.1 2 2 0.00012 0.012 8.1 0.1 19 61 269 311 260 340 0.84 # 30757 # 32454 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_80 - 388 NACHT PF05729.7 166 0.00035 13.2 0.0 1 1 6.6e-06 0.00069 12.3 0.0 4 29 156 181 154 188 0.83 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_80 - 388 AAA_25 PF13481.1 194 5.8e-06 18.8 0.0 1 1 1.1e-07 1.2e-05 17.8 0.0 25 53 144 172 122 178 0.89 # 69358 # 70521 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/8c14da13-b97e-4652-b367-98710350be08 # Target file: checkm_output/bins/pm1300/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1300/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8c14da13-b97e-4652-b367-98710350be08 checkm_output/bins/pm1300/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:55:24 2020 # [ok]