# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 71 CSD PF00313.17 66 4.9e-36 112.0 0.3 1 1 6e-37 5.4e-36 111.8 0.3 1 65 5 69 5 70 0.98 # 2894 # 3106 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.446 1_4 - 71 OB_RNB PF08206.6 58 3.5e-07 19.3 0.5 1 1 5.7e-08 5.1e-07 18.7 0.4 6 29 14 37 10 40 0.87 # 2894 # 3106 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.446 1_4 - 71 S1 PF00575.18 74 3e-05 13.6 0.0 1 1 4.2e-06 3.7e-05 13.4 0.0 15 61 12 57 1 61 0.81 # 2894 # 3106 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.446 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/0be27b43-1cda-493a-884b-3ad0d5b84335 # Target file: checkm_output/bins/pm1288/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1288/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/0be27b43-1cda-493a-884b-3ad0d5b84335 checkm_output/bins/pm1288/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:55:13 2020 # [ok]