# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_14 - 50 Eno-Rase_NADH_b PF12242.3 78 9.6e-06 18.3 0.2 1 1 9.3e-08 9.6e-06 18.3 0.2 37 67 6 34 1 45 0.76 # 12343 # 12492 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 503 cobW PF02492.14 178 0.00069 12.0 0.1 1 1 1.6e-05 0.0016 10.8 0.1 2 20 285 303 284 314 0.83 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 4_6 - 362 Saccharop_dh PF03435.13 386 1.8e-05 16.8 0.1 1 2 1.7e-07 1.8e-05 16.8 0.1 2 76 4 82 3 91 0.82 # 6367 # 7452 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 4_6 - 362 Saccharop_dh PF03435.13 386 1.8e-05 16.8 0.1 2 2 0.04 4.1 -0.9 0.3 169 207 313 355 293 360 0.75 # 6367 # 7452 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 1_26 - 503 ABC_ATPase PF09818.4 448 1.9e-05 16.3 0.4 1 2 0.00074 0.076 4.4 0.1 240 264 278 303 272 307 0.90 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 ABC_ATPase PF09818.4 448 1.9e-05 16.3 0.4 2 2 8.2e-05 0.0084 7.6 0.0 324 413 399 472 390 492 0.73 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_16 - 402 MipZ PF09140.6 261 9e-07 21.1 0.4 1 2 6.5e-05 0.0034 9.4 0.1 1 50 110 164 110 192 0.75 # 10948 # 12153 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_16 - 402 MipZ PF09140.6 261 9e-07 21.1 0.4 2 2 5.8e-05 0.003 9.6 0.0 90 135 237 282 217 287 0.85 # 10948 # 12153 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 2_3 - 389 MipZ PF09140.6 261 4.4e-06 18.8 0.3 1 2 7e-06 0.00036 12.6 0.0 2 47 108 153 107 157 0.87 # 2058 # 3224 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 2_3 - 389 MipZ PF09140.6 261 4.4e-06 18.8 0.3 2 2 0.0023 0.12 4.3 0.0 88 134 224 270 197 292 0.85 # 2058 # 3224 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 2_19 - 389 3HCDH_N PF02737.13 180 1.4e-06 21.0 0.0 1 1 3.8e-08 3.9e-06 19.6 0.0 1 99 2 94 2 107 0.87 # 19456 # 20622 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_20 - 251 UvrD_C_2 PF13538.1 104 8.8e-08 25.3 0.1 1 1 1.7e-09 1.8e-07 24.3 0.1 2 100 72 174 71 178 0.75 # 15800 # 16552 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 1_26 - 503 NB-ARC PF00931.17 287 0.00052 11.8 0.1 1 1 1e-05 0.0011 10.8 0.1 20 40 284 304 271 319 0.84 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 AAA_22 PF13401.1 131 6.5e-05 16.0 0.2 1 1 1.5e-06 0.00015 14.9 0.2 6 24 285 303 280 458 0.92 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 3_19 - 325 YjeF_N PF03853.10 169 0.00068 12.2 0.0 1 1 1.3e-05 0.0013 11.3 0.0 23 68 67 112 51 144 0.79 # 15449 # 16423 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.545 1_26 - 503 AAA_15 PF13175.1 415 3.5e-07 22.5 0.1 1 2 1.4e-05 0.0015 10.5 0.0 17 46 275 310 240 327 0.81 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 AAA_15 PF13175.1 415 3.5e-07 22.5 0.1 2 2 2.2e-05 0.0023 9.9 0.0 372 411 418 456 402 460 0.89 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 AAA_17 PF13207.1 121 1.3e-05 19.0 0.0 1 1 6.4e-07 3.3e-05 17.7 0.0 1 19 285 303 285 380 0.83 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 2_13 - 217 AAA_17 PF13207.1 121 0.0007 13.4 0.1 1 1 3.5e-05 0.0018 12.1 0.1 2 20 34 52 33 68 0.91 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 1_26 - 503 AAA_21 PF13304.1 303 1.4e-16 54.2 0.1 1 2 4.4e-07 2.3e-05 17.4 0.0 3 22 287 306 285 334 0.85 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 AAA_21 PF13304.1 303 1.4e-16 54.2 0.1 2 2 2.2e-12 1.1e-10 34.8 0.0 233 298 394 456 349 459 0.89 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 2_13 - 217 AAA_21 PF13304.1 303 2.9e-10 33.5 0.0 1 2 1.7e-07 8.9e-06 18.7 0.1 3 22 35 54 34 70 0.90 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 2_13 - 217 AAA_21 PF13304.1 303 2.9e-10 33.5 0.0 2 2 1.1e-05 0.00059 12.8 0.0 220 298 107 181 77 183 0.85 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 2_13 - 217 Miro PF08477.8 119 0.00029 14.3 0.0 1 1 7.2e-06 0.00074 13.0 0.0 2 25 34 57 33 73 0.85 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 1_26 - 503 MobB PF03205.9 140 1.8e-05 17.4 0.1 1 1 5e-07 5.2e-05 15.9 0.1 2 20 285 303 284 314 0.88 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_41 - 140 NAD_synthase PF02540.12 242 0.00048 12.0 0.0 1 2 2.1e-05 0.0022 9.9 0.0 39 103 4 70 1 75 0.88 # 36490 # 36909 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_41 - 140 NAD_synthase PF02540.12 242 0.00048 12.0 0.0 2 2 0.026 2.7 -0.3 0.0 154 171 117 134 110 137 0.80 # 36490 # 36909 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 2_19 - 389 Semialdhyde_dh PF01118.19 121 0.00062 13.0 0.0 1 1 1.7e-05 0.0017 11.6 0.0 2 78 3 85 2 96 0.69 # 19456 # 20622 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 2_3 - 389 ArsA_ATPase PF02374.10 305 1.9e-06 20.1 0.4 1 2 3.3e-06 0.00017 13.6 0.1 9 36 115 142 109 151 0.89 # 2058 # 3224 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 2_3 - 389 ArsA_ATPase PF02374.10 305 1.9e-06 20.1 0.4 2 2 0.0022 0.11 4.3 0.0 123 136 231 244 221 251 0.84 # 2058 # 3224 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 1_16 - 402 ArsA_ATPase PF02374.10 305 1.4e-05 17.2 0.0 1 1 6.1e-07 3.1e-05 16.0 0.0 4 136 113 255 110 257 0.75 # 10948 # 12153 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 2_19 - 389 F420_oxidored PF03807.12 96 0.00059 13.2 0.1 1 2 0.0001 0.01 9.3 0.0 2 73 3 85 2 109 0.75 # 19456 # 20622 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 2_19 - 389 F420_oxidored PF03807.12 96 0.00059 13.2 0.1 2 2 0.056 5.7 0.5 0.0 14 46 174 203 146 220 0.63 # 19456 # 20622 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_26 - 503 SMC_N PF02463.14 220 6.6e-10 31.5 0.6 1 1 2e-10 1.1e-08 27.6 0.6 25 202 284 460 264 476 0.68 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 2_13 - 217 SMC_N PF02463.14 220 3.9e-07 22.4 0.2 1 2 0.00014 0.0072 8.5 0.0 24 41 31 48 13 52 0.69 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 2_13 - 217 SMC_N PF02463.14 220 3.9e-07 22.4 0.2 2 2 1e-05 0.00053 12.2 0.1 149 205 132 188 105 201 0.86 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 2_3 - 389 VirC1 PF07015.6 231 5.9e-05 15.2 0.0 1 2 0.00056 0.029 6.3 0.0 4 42 109 147 107 154 0.91 # 2058 # 3224 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 2_3 - 389 VirC1 PF07015.6 231 5.9e-05 15.2 0.0 2 2 0.00052 0.027 6.5 0.0 84 139 235 290 220 316 0.77 # 2058 # 3224 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 1_16 - 402 VirC1 PF07015.6 231 0.00015 13.8 0.0 1 2 0.03 1.5 0.7 0.0 4 26 112 134 110 141 0.83 # 10948 # 12153 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_16 - 402 VirC1 PF07015.6 231 0.00015 13.8 0.0 2 2 6.3e-05 0.0032 9.5 0.0 82 136 244 298 221 316 0.86 # 10948 # 12153 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_16 - 402 Fer4_NifH PF00142.13 273 1.1e-05 17.7 0.0 1 1 2e-07 2.1e-05 16.7 0.0 7 72 117 187 112 198 0.80 # 10948 # 12153 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_26 - 503 Arch_ATPase PF01637.13 234 8.4e-05 15.3 0.1 1 1 3.1e-06 0.00032 13.4 0.1 18 58 281 326 272 456 0.78 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 AAA_16 PF13191.1 185 3.1e-06 20.2 0.0 1 1 5.6e-08 5.8e-06 19.3 0.0 23 80 282 345 272 499 0.77 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 2_13 - 217 AAA_23 PF13476.1 202 5.2e-05 16.6 0.1 1 1 3.5e-06 0.00012 15.4 0.0 11 37 22 49 2 54 0.80 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 1_26 - 503 AAA_23 PF13476.1 202 0.00019 14.7 0.4 1 1 8e-06 0.00028 14.2 0.4 18 40 281 304 265 306 0.77 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 2_15 - 292 AAA_23 PF13476.1 202 0.046 6.9 17.0 1 1 0.00065 0.022 8.0 14.7 75 201 47 182 7 183 0.67 # 13839 # 14714 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.368 1_26 - 503 AAA_18 PF13238.1 129 4.1e-05 16.9 0.3 1 2 1.3e-05 0.0013 12.0 0.1 1 18 286 303 286 331 0.85 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 AAA_18 PF13238.1 129 4.1e-05 16.9 0.3 2 2 0.0094 0.97 2.7 0.0 47 109 424 489 410 494 0.68 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 4_6 - 362 adh_short PF00106.20 167 3.7e-11 36.1 0.6 1 2 7.6e-11 3.9e-09 29.6 0.2 3 96 3 90 2 123 0.76 # 6367 # 7452 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 4_6 - 362 adh_short PF00106.20 167 3.7e-11 36.1 0.6 2 2 0.0033 0.17 4.7 0.0 142 165 161 184 156 186 0.84 # 6367 # 7452 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 3_14 - 50 adh_short PF00106.20 167 1.2e-07 24.7 1.1 1 1 2.6e-09 1.3e-07 24.6 1.1 3 38 10 44 8 48 0.79 # 12343 # 12492 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 503 AAA_13 PF13166.1 712 7.4e-06 17.5 0.0 1 2 0.0011 0.056 4.7 0.0 21 41 288 308 275 331 0.83 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 AAA_13 PF13166.1 712 7.4e-06 17.5 0.0 2 2 1.7e-05 0.00087 10.7 0.0 526 574 414 460 405 468 0.85 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 2_13 - 217 AAA_13 PF13166.1 712 0.00011 13.6 0.0 1 1 3.6e-06 0.00018 12.9 0.0 21 55 36 70 19 92 0.85 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 2_3 - 389 CbiA PF01656.18 195 5.3e-37 120.0 0.0 1 1 1.4e-38 7.1e-37 119.6 0.0 2 194 110 339 109 340 0.80 # 2058 # 3224 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 1_16 - 402 CbiA PF01656.18 195 8.9e-24 76.9 0.1 1 1 3.7e-25 1.9e-23 75.8 0.0 1 148 112 299 112 346 0.76 # 10948 # 12153 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 4_6 - 362 Polysacc_synt_2 PF02719.10 294 8e-17 53.9 0.0 1 1 2.5e-18 1.3e-16 53.3 0.0 1 117 3 113 3 134 0.88 # 6367 # 7452 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 4_5 - 296 Polysacc_synt_2 PF02719.10 294 1.5e-06 20.2 0.0 1 1 1.9e-07 9.9e-06 17.5 0.0 26 156 3 146 1 178 0.76 # 5480 # 6367 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.633 2_11 - 591 SLBB PF10531.4 59 6.5e-16 51.0 0.2 1 3 8.4e-10 8.7e-08 25.0 0.0 2 50 201 250 200 255 0.96 # 9089 # 10861 # 1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.558 2_11 - 591 SLBB PF10531.4 59 6.5e-16 51.0 0.2 2 3 0.0014 0.15 5.1 0.0 2 21 284 303 283 312 0.85 # 9089 # 10861 # 1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.558 2_11 - 591 SLBB PF10531.4 59 6.5e-16 51.0 0.2 3 3 7e-07 7.2e-05 15.6 0.1 2 56 495 552 494 553 0.92 # 9089 # 10861 # 1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.558 2_13 - 217 AAA_29 PF13555.1 62 2.5e-05 16.8 0.0 1 1 9.1e-07 4.7e-05 15.9 0.0 17 40 26 48 19 51 0.79 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 1_26 - 503 AAA_29 PF13555.1 62 3.5e-05 16.3 0.1 1 1 1.5e-06 7.6e-05 15.2 0.1 19 40 280 300 273 304 0.82 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 AAA PF00004.24 132 0.00029 14.0 0.1 1 2 8.6e-05 0.0089 9.2 0.0 3 19 288 304 286 339 0.80 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 AAA PF00004.24 132 0.00029 14.0 0.1 2 2 0.012 1.2 2.3 0.0 41 111 397 456 372 477 0.72 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 4_6 - 362 KR PF08659.5 181 3.9e-06 19.6 0.3 1 2 5.6e-07 2.9e-05 16.7 0.1 3 89 3 81 2 91 0.83 # 6367 # 7452 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 4_6 - 362 KR PF08659.5 181 3.9e-06 19.6 0.3 2 2 0.065 3.4 0.2 0.0 147 172 165 191 161 196 0.79 # 6367 # 7452 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 3_14 - 50 KR PF08659.5 181 1.9e-05 17.3 0.9 1 1 4.2e-07 2.2e-05 17.1 0.9 4 38 11 43 9 48 0.78 # 12343 # 12492 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 2_13 - 217 MMR_HSR1 PF01926.18 116 0.00056 12.8 0.2 1 1 1.2e-05 0.0012 11.8 0.2 2 21 34 53 33 212 0.71 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 1_26 - 503 DUF258 PF03193.11 161 3.5e-05 16.0 0.1 1 1 5.6e-07 5.8e-05 15.3 0.1 26 66 273 314 258 327 0.83 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 2_13 - 217 DLIC PF05783.6 472 0.00032 12.3 0.0 1 1 4.7e-06 0.00049 11.7 0.0 18 55 24 61 18 64 0.91 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 2_3 - 389 AAA_31 PF13614.1 157 9.9e-10 31.5 0.0 1 2 2.8e-08 1.4e-06 21.2 0.0 2 49 108 155 107 195 0.92 # 2058 # 3224 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 2_3 - 389 AAA_31 PF13614.1 157 9.9e-10 31.5 0.0 2 2 0.00036 0.019 7.9 0.1 110 152 227 268 223 272 0.84 # 2058 # 3224 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498 1_16 - 402 AAA_31 PF13614.1 157 1.5e-07 24.4 0.3 1 2 5.6e-05 0.0029 10.5 0.0 2 71 111 183 110 211 0.76 # 10948 # 12153 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_16 - 402 AAA_31 PF13614.1 157 1.5e-07 24.4 0.3 2 2 3.3e-05 0.0017 11.3 0.1 110 148 238 275 233 280 0.89 # 10948 # 12153 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_26 - 503 AAA_33 PF13671.1 143 8.3e-05 15.4 0.0 1 1 2.4e-06 0.00025 13.9 0.0 1 19 285 303 285 342 0.88 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 2_19 - 389 NAD_Gly3P_dh_N PF01210.18 157 1.5e-09 30.7 0.0 1 1 3.4e-11 3.5e-09 29.5 0.0 1 81 2 85 2 134 0.85 # 19456 # 20622 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_26 - 503 AAA_30 PF13604.1 196 0.001 11.6 0.0 1 1 2.3e-05 0.0023 10.4 0.0 17 51 282 316 276 336 0.76 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 2_19 - 389 ApbA PF02558.11 151 8.7e-05 14.9 0.0 1 1 1.5e-06 0.00015 14.2 0.0 1 77 3 83 3 138 0.91 # 19456 # 20622 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 2_11 - 591 Caps_synth_GfcC PF06251.6 229 7.1e-05 15.0 0.2 1 2 0.042 4.3 -0.7 0.0 122 163 192 233 187 242 0.84 # 9089 # 10861 # 1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.558 2_11 - 591 Caps_synth_GfcC PF06251.6 229 7.1e-05 15.0 0.2 2 2 5.3e-06 0.00055 12.1 0.1 115 178 479 543 474 580 0.88 # 9089 # 10861 # 1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.558 1_26 - 503 ABC_tran PF00005.22 137 4.1e-35 114.0 0.0 1 1 1.2e-36 6.2e-35 113.4 0.0 1 137 273 426 273 426 0.87 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 2_13 - 217 ABC_tran PF00005.22 137 2e-17 56.7 0.0 1 1 9.8e-19 5e-17 55.4 0.0 1 137 21 152 21 152 0.85 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 4_6 - 362 NAD_binding_4 PF07993.7 249 7.5e-18 57.2 0.0 1 1 5.4e-18 2.8e-16 52.1 0.0 1 199 5 198 5 267 0.77 # 6367 # 7452 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 4_5 - 296 NAD_binding_4 PF07993.7 249 3.1e-07 22.4 0.0 1 1 8.3e-09 4.3e-07 22.0 0.0 87 200 54 155 35 207 0.76 # 5480 # 6367 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.633 2_19 - 389 UDPG_MGDP_dh_N PF03721.9 185 1.5e-43 141.3 0.0 1 1 2.4e-45 2.5e-43 140.6 0.0 1 181 1 169 1 175 0.94 # 19456 # 20622 # 1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_26 - 503 AAA_19 PF13245.1 76 0.00017 14.3 0.0 1 1 5.4e-06 0.00055 12.7 0.0 10 35 283 307 276 346 0.78 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 4_5 - 296 RmlD_sub_bind PF04321.12 287 3.5e-107 350.4 0.1 1 1 7.6e-109 3.9e-107 350.3 0.1 1 285 1 292 1 294 0.96 # 5480 # 6367 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.633 4_6 - 362 RmlD_sub_bind PF04321.12 287 1.8e-17 56.0 0.0 1 1 6.3e-19 3.3e-17 55.2 0.0 1 282 1 331 1 336 0.81 # 6367 # 7452 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 3_14 - 50 NAD_binding_10 PF13460.1 183 0.00049 13.1 0.7 1 1 5.3e-06 0.00055 12.9 0.7 2 36 11 45 10 48 0.90 # 12343 # 12492 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 503 AAA_10 PF12846.2 304 0.00052 12.4 0.5 1 1 2.6e-05 0.0014 11.0 0.3 6 22 288 304 285 327 0.84 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 2_13 - 217 AAA_10 PF12846.2 304 0.00062 12.2 0.3 1 1 3e-05 0.0015 10.9 0.1 2 22 32 52 31 67 0.85 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 3_14 - 50 adh_short_C2 PF13561.1 241 0.00045 12.9 0.1 1 1 4.5e-06 0.00046 12.9 0.1 5 32 16 43 13 48 0.86 # 12343 # 12492 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.540 1_26 - 503 SbcCD_C PF13558.1 90 0.00018 14.4 0.0 1 1 9.8e-06 0.001 12.0 0.0 63 89 415 441 374 442 0.82 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 4_6 - 362 3Beta_HSD PF01073.14 280 2.9e-17 55.2 0.0 1 1 4.5e-19 4.7e-17 54.5 0.0 1 224 4 242 4 252 0.82 # 6367 # 7452 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 1_26 - 503 PduV-EutP PF10662.4 143 0.00055 12.4 0.1 1 1 1.2e-05 0.0012 11.3 0.1 4 25 286 307 284 313 0.87 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 4_6 - 362 Epimerase PF01370.16 236 1.2e-80 263.3 0.0 1 1 2.8e-82 1.5e-80 263.0 0.0 1 236 3 259 3 259 0.96 # 6367 # 7452 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 4_5 - 296 Epimerase PF01370.16 236 1.6e-14 46.8 0.0 1 1 4.9e-16 2.5e-14 46.2 0.0 1 174 3 157 3 171 0.82 # 5480 # 6367 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.633 2_13 - 217 ArgK PF03308.11 267 0.00053 11.7 0.1 1 1 7.7e-06 0.0008 11.1 0.1 18 50 20 52 12 64 0.80 # 11728 # 12378 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.449 1_26 - 503 UPF0079 PF02367.12 123 0.00027 13.5 0.0 1 1 5.4e-06 0.00055 12.5 0.0 11 38 279 305 272 315 0.82 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 NACHT PF05729.7 166 0.00037 13.1 0.0 1 1 7.3e-06 0.00075 12.1 0.0 2 20 285 303 284 323 0.86 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 AAA_25 PF13481.1 194 0.0002 13.7 0.7 1 1 1.9e-05 0.002 10.5 0.7 31 50 281 300 268 457 0.78 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 1_26 - 503 AAA_28 PF13521.1 163 0.00031 13.7 0.1 1 1 6.4e-06 0.00066 12.6 0.0 2 41 286 328 285 345 0.72 # 21888 # 23396 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.525 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/3090c2a8-846f-4ac5-bbee-5d3f0ef92daa # Target file: checkm_output/bins/pm1284/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1284/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3090c2a8-846f-4ac5-bbee-5d3f0ef92daa checkm_output/bins/pm1284/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:55:13 2020 # [ok]