# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_37 - 231 OB_NTP_bind PF07717.11 114 0.00062 12.5 0.0 1 1 9.9e-06 0.001 11.9 0.0 24 83 28 97 16 127 0.77 # 33209 # 33901 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_13 - 228 UPF0020 PF01170.13 180 1.4e-05 17.6 0.0 1 2 0.00031 0.031 6.7 0.0 103 119 17 33 4 88 0.73 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 2_13 - 228 UPF0020 PF01170.13 180 1.4e-05 17.6 0.0 2 2 6.4e-05 0.0064 9.0 0.0 28 54 163 188 158 220 0.67 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 2_20 - 209 MipZ PF09140.6 261 1.9e-21 69.2 0.5 1 2 1.2e-12 1.2e-10 33.8 0.0 2 53 2 52 1 60 0.89 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_20 - 209 MipZ PF09140.6 261 1.9e-21 69.2 0.5 2 2 1.6e-12 1.6e-10 33.4 0.0 87 140 65 118 58 128 0.92 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_20 - 209 YhjQ PF06564.7 244 2.4e-05 16.7 0.3 1 2 1.8e-06 0.00018 13.8 0.3 4 38 3 37 1 50 0.89 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_20 - 209 YhjQ PF06564.7 244 2.4e-05 16.7 0.3 2 2 0.029 3 0.0 0.0 108 144 69 103 44 113 0.78 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_6 - 176 SSB PF00436.20 104 3.5e-41 132.3 0.4 1 1 4.5e-43 4.6e-41 131.9 0.4 1 101 6 109 6 112 0.96 # 4066 # 4593 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.585 1_42 - 383 DUF87 PF01935.12 229 0.00062 12.5 0.0 1 1 1.1e-05 0.0011 11.7 0.0 28 56 162 191 161 192 0.88 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_42 - 383 AAA_22 PF13401.1 131 1e-05 18.6 0.0 1 1 4.9e-07 2.5e-05 17.4 0.0 4 46 157 196 152 233 0.76 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_55 - 518 AAA_22 PF13401.1 131 0.00028 14.0 0.0 1 1 1.3e-05 0.00066 12.8 0.0 6 28 227 249 222 330 0.78 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_42 - 383 ATP_bind_1 PF03029.12 238 4.7e-05 15.9 0.0 1 1 7.2e-07 7.3e-05 15.3 0.0 1 23 162 184 162 197 0.86 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 2_13 - 228 Methyltransf_11 PF08241.7 95 0.00062 13.2 0.0 1 2 0.0024 0.24 4.9 0.0 78 93 53 68 47 70 0.84 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 2_13 - 228 Methyltransf_11 PF08241.7 95 0.00062 13.2 0.0 2 2 0.0014 0.14 5.7 0.0 5 54 172 220 168 226 0.82 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 2_20 - 209 SRP54 PF00448.17 196 2.5e-07 23.2 0.1 1 1 1.5e-08 1.5e-06 20.7 0.1 4 98 2 91 1 134 0.80 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_13 - 228 N6_N4_Mtase PF01555.13 231 5.7e-37 120.3 0.0 1 2 1e-15 1e-13 44.2 0.0 1 114 21 124 21 137 0.89 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 2_13 - 228 N6_N4_Mtase PF01555.13 231 5.7e-37 120.3 0.0 2 2 5.4e-25 5.4e-23 74.5 0.0 169 228 141 200 126 203 0.90 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 2_20 - 209 AAA_17 PF13207.1 121 1.6e-05 18.7 0.0 1 1 1.2e-06 4.1e-05 17.3 0.0 9 77 11 84 9 205 0.75 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_42 - 383 AAA_17 PF13207.1 121 1.9e-05 18.4 0.1 1 1 7.1e-06 0.00024 14.9 0.0 3 47 161 208 161 251 0.76 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_55 - 518 AAA_17 PF13207.1 121 2.8e-05 17.9 0.1 1 1 3.4e-06 0.00011 15.9 0.0 1 23 227 249 227 342 0.74 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_42 - 383 MobB PF03205.9 140 1.9e-05 17.3 0.0 1 2 0.033 1.7 1.3 0.0 14 60 61 108 61 127 0.88 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_42 - 383 MobB PF03205.9 140 1.9e-05 17.3 0.0 2 2 6.2e-06 0.00031 13.4 0.0 5 26 162 183 160 193 0.90 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 2_20 - 209 MobB PF03205.9 140 5.7e-05 15.8 0.1 1 1 3.2e-06 0.00016 14.3 0.0 10 42 11 41 1 46 0.79 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_20 - 209 ArsA_ATPase PF02374.10 305 4.4e-08 25.4 0.9 1 3 1.2e-09 1.2e-07 24.0 0.1 3 48 3 48 1 69 0.85 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_20 - 209 ArsA_ATPase PF02374.10 305 4.4e-08 25.4 0.9 2 3 0.053 5.4 -1.2 0.0 121 135 69 85 47 86 0.75 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_20 - 209 ArsA_ATPase PF02374.10 305 4.4e-08 25.4 0.9 3 3 0.075 7.6 -1.7 0.0 205 234 132 161 118 202 0.65 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_55 - 518 T2SE PF00437.15 272 1.6e-41 134.9 0.0 1 1 5.4e-43 2.7e-41 134.1 0.0 10 271 97 373 90 374 0.85 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_42 - 383 T2SE PF00437.15 272 8.1e-36 116.2 0.0 1 1 2.4e-37 1.2e-35 115.6 0.0 120 269 149 306 127 309 0.88 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_55 - 518 G-alpha PF00503.15 389 0.00064 11.3 0.0 1 2 0.054 5.5 -1.6 0.0 234 272 70 113 29 117 0.80 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_55 - 518 G-alpha PF00503.15 389 0.00064 11.3 0.0 2 2 1.9e-05 0.002 9.7 0.0 58 87 225 254 214 312 0.83 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 2_20 - 209 VirC1 PF07015.6 231 3.4e-09 29.0 0.0 1 1 7.1e-11 7.2e-09 27.9 0.0 3 172 2 164 1 206 0.74 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_20 - 209 Fer4_NifH PF00142.13 273 7.5e-05 14.9 0.2 1 1 2.3e-06 0.00023 13.3 0.0 8 38 9 39 2 46 0.89 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_55 - 518 AAA_16 PF13191.1 185 7.8e-05 15.6 0.0 1 1 4.6e-06 0.00023 14.1 0.0 8 52 213 254 212 330 0.81 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_42 - 383 AAA_16 PF13191.1 185 0.0003 13.7 0.0 1 1 1.2e-05 0.00062 12.7 0.0 27 52 160 188 148 282 0.82 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_55 - 518 AAA_23 PF13476.1 202 0.00015 15.1 0.1 1 1 1.1e-05 0.00055 13.2 0.0 20 38 226 244 209 249 0.86 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_42 - 383 AAA_23 PF13476.1 202 0.00022 14.5 0.0 1 1 7.3e-06 0.00037 13.8 0.0 19 40 157 178 142 209 0.83 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_42 - 383 AAA_18 PF13238.1 129 1.5e-05 18.2 0.0 1 1 6e-07 3e-05 17.3 0.0 2 42 161 197 161 230 0.83 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_55 - 518 AAA_18 PF13238.1 129 0.00038 13.7 0.0 1 1 2.2e-05 0.0011 12.2 0.0 1 18 228 245 228 312 0.86 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 2_20 - 209 CbiA PF01656.18 195 1.8e-22 72.6 0.0 1 1 3.1e-24 3.1e-22 71.8 0.0 1 158 3 141 3 179 0.75 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_55 - 518 AAA_14 PF13173.1 128 0.0009 12.1 0.0 1 1 3.6e-05 0.0037 10.1 0.0 5 30 228 254 225 287 0.80 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_55 - 518 AAA_29 PF13555.1 62 2.7e-05 16.6 0.0 1 1 1.1e-06 5.4e-05 15.6 0.0 21 40 224 242 216 254 0.83 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_42 - 383 AAA_29 PF13555.1 62 3.9e-05 16.1 0.0 1 1 2.3e-06 0.00012 14.6 0.0 26 44 160 178 151 186 0.83 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_55 - 518 AAA PF00004.24 132 0.00047 13.3 0.0 1 3 0.045 4.5 0.4 0.0 38 57 81 100 26 114 0.78 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_55 - 518 AAA PF00004.24 132 0.00047 13.3 0.0 2 3 0.00033 0.033 7.3 0.0 1 21 228 248 228 277 0.83 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_55 - 518 AAA PF00004.24 132 0.00047 13.3 0.0 3 3 0.034 3.4 0.8 0.0 9 66 442 508 436 515 0.62 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 3_9 - 139 Ribosomal_S8 PF00410.14 129 0.0013 11.5 1.8 1 2 0.0059 0.59 2.9 0.1 41 73 2 29 1 35 0.56 # 6107 # 6523 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.360 3_9 - 139 Ribosomal_S8 PF00410.14 129 0.0013 11.5 1.8 2 2 0.00012 0.012 8.4 0.1 50 87 90 128 50 135 0.79 # 6107 # 6523 # 1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.360 1_13 - 764 TraG-D_C PF12696.2 128 1.3e-06 21.3 0.2 1 1 2.8e-08 2.9e-06 20.1 0.2 1 88 437 524 437 554 0.82 # 10126 # 12417 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 2_20 - 209 AAA_31 PF13614.1 157 4.3e-06 19.6 0.0 1 2 2.5e-07 2.5e-05 17.1 0.0 2 42 2 42 1 55 0.88 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_20 - 209 AAA_31 PF13614.1 157 4.3e-06 19.6 0.0 2 2 0.055 5.5 -0.2 0.0 109 127 68 86 62 113 0.68 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_13 - 228 Methyltransf_26 PF13659.1 117 1.2e-11 37.6 0.0 1 2 2.1e-07 2.1e-05 17.5 0.0 57 114 7 71 2 74 0.69 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 2_13 - 228 Methyltransf_26 PF13659.1 117 1.2e-11 37.6 0.0 2 2 1.3e-07 1.3e-05 18.1 0.0 4 44 167 206 164 221 0.82 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_55 - 518 AAA_30 PF13604.1 196 0.00018 14.0 0.0 1 1 3.2e-06 0.00032 13.2 0.0 4 44 211 251 209 280 0.86 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_45 - 195 DNA_pol3_delta PF06144.8 172 2.1e-06 20.3 0.0 1 1 3e-08 3e-06 19.7 0.0 35 99 92 152 74 179 0.80 # 41785 # 42369 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.407 1_55 - 518 ABC_tran PF00005.22 137 8.6e-05 15.8 0.0 1 1 4.4e-06 0.00022 14.5 0.0 12 40 226 255 216 298 0.81 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_42 - 383 ABC_tran PF00005.22 137 0.00011 15.4 0.0 1 1 4.3e-06 0.00022 14.5 0.0 16 35 162 181 152 211 0.87 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 2_13 - 228 Cons_hypoth95 PF03602.10 183 1.4e-05 17.5 0.0 1 2 0.00043 0.043 6.1 0.0 112 146 18 54 9 81 0.65 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 2_13 - 228 Cons_hypoth95 PF03602.10 183 1.4e-05 17.5 0.0 2 2 3.9e-05 0.004 9.5 0.0 41 62 162 183 145 219 0.78 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_55 - 518 DAP3 PF10236.4 309 0.00065 11.6 0.0 1 1 1.2e-05 0.0012 10.7 0.0 21 42 223 244 214 253 0.86 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_55 - 518 AAA_19 PF13245.1 76 9.8e-05 15.0 0.0 1 1 5.3e-06 0.00027 13.6 0.0 10 46 226 259 218 270 0.79 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 2_20 - 209 AAA_19 PF13245.1 76 0.00029 13.5 0.1 1 2 0.00019 0.0097 8.6 0.0 20 48 11 35 9 44 0.84 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 2_20 - 209 AAA_19 PF13245.1 76 0.00029 13.5 0.1 2 2 0.021 1.1 2.1 0.0 42 63 135 158 118 184 0.76 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_27 - 1015 AAA_10 PF12846.2 304 1.1e-30 100.0 0.0 1 1 1.3e-31 2.6e-30 98.7 0.0 8 302 502 897 498 898 0.88 # 23731 # 26775 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.508 1_13 - 764 AAA_10 PF12846.2 304 2.4e-05 16.8 1.0 1 1 3.6e-06 7.3e-05 15.2 0.9 2 287 137 501 136 514 0.62 # 10126 # 12417 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 2_20 - 209 AAA_10 PF12846.2 304 0.00016 14.1 0.0 1 1 1.3e-05 0.00025 13.4 0.0 11 39 11 39 3 66 0.90 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_55 - 518 AAA_10 PF12846.2 304 0.00023 13.6 0.0 1 1 2.1e-05 0.00043 12.7 0.0 4 30 228 256 226 304 0.78 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_42 - 383 AAA_10 PF12846.2 304 0.00052 12.4 0.0 1 1 5e-05 0.001 11.4 0.0 2 21 158 177 157 196 0.83 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_9 - 283 Methyltransf_27 PF13708.1 194 2.1e-66 216.0 0.0 1 1 2.8e-68 2.8e-66 215.6 0.0 2 194 85 278 84 278 0.94 # 5545 # 6393 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.510 1_13 - 764 TrwB_AAD_bind PF10412.4 386 4.1e-07 21.8 0.3 1 2 9.3e-05 0.0094 7.4 0.0 11 32 132 153 126 157 0.84 # 10126 # 12417 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 1_13 - 764 TrwB_AAD_bind PF10412.4 386 4.1e-07 21.8 0.3 2 2 5.3e-06 0.00053 11.5 0.1 247 332 440 525 427 555 0.88 # 10126 # 12417 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 2_13 - 228 MethyltransfD12 PF02086.10 260 0.00042 12.7 0.0 1 2 0.014 1.4 1.1 0.0 175 188 18 31 8 93 0.80 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 2_13 - 228 MethyltransfD12 PF02086.10 260 0.00042 12.7 0.0 2 2 4e-05 0.004 9.5 0.0 20 46 163 189 148 197 0.78 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_42 - 383 RNA_helicase PF00910.17 107 9.7e-05 15.5 0.0 1 1 1.9e-06 0.00019 14.5 0.0 2 28 161 187 160 205 0.83 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_65 - 178 TIGR00922 TIGR00922 172 0.0012 11.3 0.0 1 1 1.4e-05 0.0014 11.1 0.0 55 103 61 109 22 142 0.82 # 60842 # 61375 # -1 # ID=1_65;partial=00;start_type=GTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.436 2_20 - 209 AAA_25 PF13481.1 194 0.00012 14.4 0.1 1 1 9.3e-06 0.00031 13.1 0.0 42 87 10 44 3 90 0.78 # 15053 # 15679 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.431 1_42 - 383 AAA_25 PF13481.1 194 0.0002 13.7 0.0 1 1 1.1e-05 0.00036 12.9 0.0 24 58 148 182 124 207 0.78 # 38973 # 40121 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_55 - 518 AAA_25 PF13481.1 194 0.0003 13.1 0.0 1 2 0.00011 0.0038 9.5 0.0 19 65 211 260 200 270 0.72 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 1_55 - 518 AAA_25 PF13481.1 194 0.0003 13.1 0.0 2 2 0.069 2.3 0.4 0.0 153 190 297 337 292 340 0.73 # 51858 # 53411 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 2_13 - 228 Methyltransf_15 PF09445.5 164 0.00086 11.8 0.0 1 2 0.045 4.5 -0.3 0.0 53 79 4 29 2 32 0.90 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 2_13 - 228 Methyltransf_15 PF09445.5 164 0.00086 11.8 0.0 2 2 4.7e-05 0.0047 9.4 0.0 3 31 166 194 164 206 0.87 # 8343 # 9026 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/0b7f9170-17a4-410c-8c1a-803a56295530 # Target file: checkm_output/bins/pm1226/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1226/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/0b7f9170-17a4-410c-8c1a-803a56295530 checkm_output/bins/pm1226/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:54:39 2020 # [ok]