# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_57 - 262 Mg_chelatase PF01078.16 207 0.001 12.1 0.0 1 1 1.1e-05 0.0021 11.1 0.0 23 43 100 120 96 153 0.86 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 5_3 - 372 ATP_bind_3 PF01171.15 182 0.00029 14.2 0.0 1 2 5.2e-05 0.01 9.2 0.0 1 59 52 110 52 129 0.78 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_3 - 372 ATP_bind_3 PF01171.15 182 0.00029 14.2 0.0 2 2 0.005 1 2.7 0.0 134 161 232 260 207 262 0.72 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_85 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 1 5 0.019 3.7 1.5 8.8 39 98 89 152 77 158 0.72 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 2 5 0.00084 0.17 5.9 3.1 50 100 146 196 143 199 0.89 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 3 5 2.6e-06 0.00051 13.9 12.2 19 100 216 294 201 297 0.85 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 4 5 0.00031 0.061 7.3 2.1 62 105 284 327 282 330 0.90 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 5 5 0.0059 1.2 3.1 1.6 82 105 304 327 296 345 0.51 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_57 - 262 IstB_IS21 PF01695.12 178 6.1e-69 224.8 0.1 1 1 8.2e-71 8.1e-69 224.4 0.1 2 177 55 230 54 231 0.98 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_2 - 504 IstB_IS21 PF01695.12 178 0.0012 12.2 0.0 1 1 3.4e-05 0.0033 10.7 0.0 45 88 137 180 94 187 0.82 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 2_34 - 262 MipZ PF09140.6 261 3.6e-10 33.2 0.0 1 2 6.6e-10 1.3e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_34 - 262 MipZ PF09140.6 261 3.6e-10 33.2 0.0 2 2 0.00031 0.062 6.2 0.0 89 122 117 150 89 166 0.74 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_65 - 565 3HCDH_N PF02737.13 180 0.0063 10.0 6.4 1 2 0.0047 0.94 2.9 2.4 1 30 99 128 99 134 0.93 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 3HCDH_N PF02737.13 180 0.0063 10.0 6.4 2 2 9e-05 0.018 8.6 0.1 2 39 272 309 271 348 0.73 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 GIDA PF01134.17 392 5.1e-08 26.0 6.6 1 3 3.5e-10 6.8e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 GIDA PF01134.17 392 5.1e-08 26.0 6.6 2 3 0.038 7.5 -0.9 0.0 3 31 273 301 271 315 0.84 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 GIDA PF01134.17 392 5.1e-08 26.0 6.6 3 3 0.018 3.6 0.1 0.1 349 385 393 429 387 433 0.77 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_16 - 176 SSB PF00436.20 104 2.4e-41 133.7 0.3 1 1 1.5e-43 3.1e-41 133.4 0.3 1 104 5 109 5 109 0.99 # 13482 # 14009 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_87 - 504 UvrD_C_2 PF13538.1 104 1.5e-10 35.0 0.0 1 1 3.5e-12 6.9e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_65 - 565 Pyr_redox_2 PF07992.9 201 1.6e-43 142.8 0.0 1 1 3.2e-45 6.4e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_14 - 622 DUF87 PF01935.12 229 1.7e-08 28.4 0.0 1 1 4.3e-10 4.3e-08 27.1 0.0 24 63 173 211 168 269 0.87 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 DUF87 PF01935.12 229 3.1e-08 27.5 0.1 1 1 5.8e-10 5.7e-08 26.7 0.1 23 154 139 275 120 351 0.71 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_60 - 287 AAA_22 PF13401.1 131 7.5e-17 55.6 0.0 1 1 4e-18 1.3e-16 54.8 0.0 7 126 64 190 59 194 0.94 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_57 - 262 AAA_22 PF13401.1 131 5.5e-06 20.5 0.1 1 2 1.7e-05 0.00055 14.0 0.2 2 28 97 123 96 159 0.74 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_57 - 262 AAA_22 PF13401.1 131 5.5e-06 20.5 0.1 2 2 0.012 0.41 4.7 0.0 87 117 151 196 132 204 0.62 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_87 - 504 AAA_22 PF13401.1 131 6.4e-05 17.0 0.0 1 2 0.00016 0.0053 10.8 0.0 8 68 23 92 17 122 0.63 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 AAA_22 PF13401.1 131 6.4e-05 17.0 0.0 2 2 0.03 0.98 3.4 0.0 82 124 189 225 164 229 0.77 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_14 - 323 AAA_22 PF13401.1 131 0.00024 15.1 0.0 1 1 1.6e-05 0.00051 14.1 0.0 5 54 62 103 56 164 0.76 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_14 - 622 AAA_22 PF13401.1 131 0.00025 15.1 0.0 1 1 2.5e-05 0.00082 13.4 0.0 3 68 171 231 166 287 0.83 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 AAA_22 PF13401.1 131 0.0007 13.6 0.1 1 2 0.0012 0.039 8.0 0.0 5 27 140 162 135 199 0.82 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 AAA_22 PF13401.1 131 0.0007 13.6 0.1 2 2 0.047 1.5 2.8 0.1 88 99 339 354 265 410 0.77 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_65 - 565 DFP PF04127.10 185 0.0015 12.0 2.4 1 2 0.00039 0.078 6.4 0.4 28 51 105 128 99 156 0.83 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 DFP PF04127.10 185 0.0015 12.0 2.4 2 2 0.0014 0.27 4.7 0.1 32 53 281 302 276 336 0.77 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_33 - 542 DNA_methylase PF00145.12 335 1.2e-28 94.0 0.0 1 1 6.3e-30 6.2e-28 91.7 0.0 3 333 126 441 124 443 0.77 # 25402 # 27027 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_23 - 476 DNA_methylase PF00145.12 335 1.2e-10 34.9 0.0 1 2 4.1e-11 4.1e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 18306 # 19733 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 2_23 - 476 DNA_methylase PF00145.12 335 1.2e-10 34.9 0.0 2 2 0.0061 0.61 2.9 0.0 290 330 407 448 341 452 0.73 # 18306 # 19733 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 2_20 - 93 Ribosomal_L2_C PF03947.13 130 0.00099 12.8 0.0 1 1 6.3e-06 0.0012 12.5 0.0 74 111 44 80 24 82 0.86 # 16466 # 16744 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.441 1_14 - 323 AAA_3 PF07726.6 131 0.00014 15.4 0.0 1 1 2.2e-06 0.00022 14.7 0.0 3 114 65 188 63 212 0.80 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_57 - 262 AAA_3 PF07726.6 131 0.001 12.6 0.0 1 1 2.4e-05 0.0024 11.4 0.0 2 72 102 171 101 201 0.70 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_65 - 565 NAD_binding_7 PF13241.1 103 6.7e-07 23.4 1.2 1 2 5.4e-05 0.011 9.9 0.2 9 38 99 128 96 184 0.89 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 NAD_binding_7 PF13241.1 103 6.7e-07 23.4 1.2 2 2 1.4e-05 0.0028 11.8 0.1 8 41 270 306 264 380 0.74 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_24 - 295 N6_N4_Mtase PF01555.13 231 7.9e-09 29.2 0.1 1 2 1.7e-06 0.00034 14.0 0.0 180 223 28 72 4 76 0.84 # 21390 # 22274 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.510 1_24 - 295 N6_N4_Mtase PF01555.13 231 7.9e-09 29.2 0.1 2 2 3.5e-06 0.0007 13.0 0.1 2 172 90 267 89 283 0.72 # 21390 # 22274 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.510 1_14 - 323 AAA_17 PF13207.1 121 5.1e-05 18.0 0.0 1 1 1.1e-06 0.00011 16.9 0.0 3 27 65 89 64 166 0.90 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_57 - 262 AAA_17 PF13207.1 121 0.00022 15.9 0.0 1 1 3.1e-06 0.00031 15.4 0.0 2 38 102 133 101 232 0.74 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_14 - 622 MobB PF03205.9 140 0.001 12.6 0.0 1 1 1.7e-05 0.0034 10.9 0.0 4 34 176 206 175 214 0.90 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_34 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 1 2 3e-07 6e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_34 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 2 2 0.029 5.7 -0.3 0.0 124 136 124 136 106 143 0.79 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_57 - 262 PhoH PF02562.11 205 2.5e-08 27.2 0.1 1 1 5.9e-10 5.8e-08 26.0 0.1 3 61 83 142 81 179 0.77 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_87 - 504 PhoH PF02562.11 205 5.1e-06 19.7 0.2 1 2 0.0026 0.26 4.3 0.0 22 45 22 45 4 61 0.78 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 PhoH PF02562.11 205 5.1e-06 19.7 0.2 2 2 1.5e-05 0.0015 11.7 0.0 122 168 196 240 193 255 0.83 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_57 - 262 MCM PF00493.18 331 0.0004 13.1 0.0 1 2 7.5e-06 0.0015 11.2 0.0 56 120 98 162 82 172 0.81 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_57 - 262 MCM PF00493.18 331 0.0004 13.1 0.0 2 2 0.034 6.8 -0.8 0.0 161 211 190 237 186 259 0.71 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 323 T2SE PF00437.15 272 6.9e-05 15.7 0.0 1 1 1.6e-06 0.00016 14.5 0.0 105 148 40 81 9 100 0.77 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_14 - 622 T2SE PF00437.15 272 0.00036 13.3 0.0 1 1 5.9e-06 0.00058 12.6 0.0 116 162 163 206 124 227 0.78 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_65 - 565 NAD_binding_8 PF13450.1 68 6.9e-05 16.7 1.2 1 2 3.5e-07 6.9e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 NAD_binding_8 PF13450.1 68 6.9e-05 16.7 1.2 2 2 0.041 8.1 0.5 0.2 1 25 274 298 274 303 0.81 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 F420_oxidored PF03807.12 96 0.014 9.7 4.1 1 2 0.0023 0.46 4.9 1.2 2 31 100 126 99 131 0.87 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 F420_oxidored PF03807.12 96 0.014 9.7 4.1 2 2 0.0075 1.5 3.3 0.1 1 34 271 300 271 323 0.87 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_3 - 372 TIGR02432 TIGR02432 189 8e-05 16.2 0.1 1 2 1.1e-05 0.0021 11.5 0.0 1 58 52 109 52 119 0.85 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_3 - 372 TIGR02432 TIGR02432 189 8e-05 16.2 0.1 2 2 0.0084 1.7 2.1 0.0 140 165 235 260 207 262 0.76 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_14 - 323 Arch_ATPase PF01637.13 234 8.3e-05 16.2 0.0 1 1 7e-07 0.00014 15.5 0.0 4 44 45 85 43 94 0.91 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_2 - 504 AAA_16 PF13191.1 185 2.4e-05 18.3 0.3 1 1 3.7e-06 0.00015 15.7 0.3 20 63 135 178 127 347 0.60 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_60 - 287 AAA_16 PF13191.1 185 2.7e-05 18.1 0.0 1 2 3.9e-05 0.0015 12.3 0.0 8 52 45 94 43 146 0.70 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_60 - 287 AAA_16 PF13191.1 185 2.7e-05 18.1 0.0 2 2 0.019 0.77 3.6 0.0 139 183 134 184 114 186 0.72 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_14 - 323 AAA_16 PF13191.1 185 4.7e-05 17.3 0.8 1 1 3.6e-06 0.00014 15.7 0.0 7 48 47 85 42 102 0.79 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_21 - 206 AAA_16 PF13191.1 185 8.3e-05 16.5 0.1 1 1 3.2e-06 0.00013 15.9 0.1 27 68 11 54 3 168 0.79 # 16977 # 17594 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 1_57 - 262 AAA_16 PF13191.1 185 0.00028 14.7 0.1 1 1 1.7e-05 0.00068 13.5 0.1 23 51 98 126 84 166 0.79 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_85 - 347 AAA_13 PF13166.1 712 0.013 7.7 36.6 1 2 0.0019 0.38 2.9 28.3 283 457 85 259 71 272 0.58 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 AAA_13 PF13166.1 712 0.013 7.7 36.6 2 2 2.3e-05 0.0046 9.2 23.2 287 474 160 339 154 345 0.78 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_34 - 262 CbiA PF01656.18 195 2.3e-30 99.3 0.0 1 1 3e-32 3e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_2 - 504 CbiA PF01656.18 195 0.00043 13.6 0.0 1 1 7.8e-06 0.00077 12.8 0.0 3 63 143 231 142 282 0.59 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_87 - 504 AAA_14 PF13173.1 128 3.2e-05 17.7 1.3 1 2 2.5e-05 0.005 10.6 0.1 11 46 28 62 18 156 0.76 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 AAA_14 PF13173.1 128 3.2e-05 17.7 1.3 2 2 0.0011 0.22 5.3 0.0 51 99 176 227 127 241 0.73 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_65 - 565 HI0933_like PF03486.9 409 4.4e-08 25.8 3.7 1 2 2.4e-06 0.00024 13.5 2.5 2 33 99 130 98 138 0.91 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 HI0933_like PF03486.9 409 4.4e-08 25.8 3.7 2 2 1.4e-05 0.0014 10.9 0.0 82 164 284 366 276 385 0.83 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_1 - 98 HI0933_like PF03486.9 409 0.00053 12.4 0.0 1 1 6.6e-06 0.00066 12.0 0.0 354 393 40 79 34 83 0.91 # 2 # 295 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.510 1_57 - 262 AAA_29 PF13555.1 62 2.7e-05 17.5 0.0 1 1 5.6e-07 5.6e-05 16.5 0.0 5 47 80 125 78 136 0.83 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 323 AAA_29 PF13555.1 62 0.0024 11.3 1.0 1 1 5.4e-05 0.0053 10.2 0.3 21 38 59 76 54 79 0.86 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_65 - 565 FAD_binding_2 PF00890.19 417 8.5e-06 18.6 4.7 1 3 4.3e-08 8.5e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 FAD_binding_2 PF00890.19 417 8.5e-06 18.6 4.7 2 3 0.034 6.8 -0.8 0.1 143 204 311 369 297 388 0.72 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 FAD_binding_2 PF00890.19 417 8.5e-06 18.6 4.7 3 3 0.074 15 -1.9 0.0 376 402 388 408 377 424 0.82 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_57 - 262 AAA PF00004.24 132 2.1e-07 25.1 0.0 1 1 3.5e-09 3.5e-07 24.4 0.0 1 111 102 202 102 230 0.70 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 323 AAA PF00004.24 132 0.00067 13.7 0.1 1 1 1.5e-05 0.0015 12.6 0.1 2 33 65 96 64 149 0.83 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_57 - 262 Bac_DnaA PF00308.13 219 2.5e-10 34.2 0.0 1 1 2.1e-12 4.1e-10 33.5 0.0 36 136 101 199 80 221 0.87 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_87 - 504 UvrD_C PF13361.1 351 1.8e-10 34.6 0.0 1 1 1.7e-12 3.4e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 5_3 - 372 PAPS_reduct PF01507.14 174 7e-12 39.4 0.4 1 2 0.028 2.8 1.6 0.0 2 17 53 68 52 91 0.76 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_3 - 372 PAPS_reduct PF01507.14 174 7e-12 39.4 0.4 2 2 8.8e-13 8.7e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_37 - 818 PAPS_reduct PF01507.14 174 5e-05 17.0 0.0 1 1 2.1e-06 0.0002 15.0 0.0 3 151 69 256 67 261 0.69 # 28854 # 31307 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.522 1_65 - 565 Pyr_redox_3 PF13738.1 203 2.5e-17 57.4 0.1 1 2 4.4e-14 8.8e-12 39.3 0.1 1 201 101 303 101 305 0.75 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 Pyr_redox_3 PF13738.1 203 2.5e-17 57.4 0.1 2 2 9e-07 0.00018 15.5 0.0 93 147 320 375 309 430 0.76 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_60 - 287 TniB PF05621.6 302 6.8e-201 659.2 5.6 1 1 3.8e-203 7.6e-201 659.0 5.6 1 285 1 285 1 286 1.00 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 2_31 - 212 N6_Mtase PF02384.11 311 7.3e-07 22.3 0.0 1 1 5.9e-09 1.2e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 22924 # 23559 # 1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 2_14 - 622 TraG-D_C PF12696.2 128 5.6e-15 49.2 0.0 1 1 1e-16 1e-14 48.4 0.0 1 124 471 595 471 599 0.83 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 TraG-D_C PF12696.2 128 9.6e-07 22.6 0.0 1 1 2.1e-08 2.1e-06 21.5 0.0 17 75 362 416 344 422 0.84 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 2_34 - 262 AAA_31 PF13614.1 157 2.6e-10 34.3 0.0 1 1 2.6e-12 5.2e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_57 - 262 AAA_33 PF13671.1 143 0.00072 13.3 0.2 1 1 1.8e-05 0.0018 12.1 0.2 2 36 102 142 102 255 0.67 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_16 - 176 AAA_33 PF13671.1 143 0.0011 12.7 0.0 1 1 1.7e-05 0.0017 12.1 0.0 26 102 33 104 23 109 0.75 # 13482 # 14009 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_57 - 262 KTI12 PF08433.5 270 0.00035 13.7 0.4 1 2 6.4e-05 0.013 8.6 0.0 4 81 102 172 101 174 0.68 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_57 - 262 KTI12 PF08433.5 270 0.00035 13.7 0.4 2 2 0.0037 0.73 2.8 0.1 34 59 232 257 212 261 0.77 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_57 - 262 DnaB_C PF03796.10 259 0.0003 13.6 0.0 1 1 2.4e-06 0.00048 12.9 0.0 16 55 96 135 85 158 0.90 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_87 - 504 AAA_30 PF13604.1 196 9.7e-08 25.7 0.1 1 2 1.8e-06 0.00018 15.0 0.0 19 80 20 81 11 109 0.77 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 AAA_30 PF13604.1 196 9.7e-08 25.7 0.1 2 2 0.00035 0.034 7.5 0.0 115 133 211 229 174 278 0.75 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_57 - 262 AAA_30 PF13604.1 196 0.00093 12.7 0.2 1 1 2.8e-05 0.0027 11.1 0.1 16 49 97 131 87 162 0.73 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_14 - 622 FtsK_SpoIIIE PF01580.13 205 1.7e-07 24.8 0.0 1 2 3.8e-08 2.5e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_14 - 622 FtsK_SpoIIIE PF01580.13 205 1.7e-07 24.8 0.0 2 2 0.042 2.8 1.2 0.0 176 204 481 509 472 510 0.86 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 FtsK_SpoIIIE PF01580.13 205 6e-07 23.0 0.1 1 1 2.6e-08 1.7e-06 21.5 0.1 33 132 134 241 88 386 0.64 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 2_21 - 206 FtsK_SpoIIIE PF01580.13 205 0.0014 11.9 0.2 1 1 7.1e-05 0.0047 10.3 0.0 34 53 4 23 1 28 0.83 # 16977 # 17594 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 1_14 - 323 ABC_tran PF00005.22 137 0.0014 12.8 0.0 1 1 1.3e-05 0.0027 11.9 0.0 11 46 61 96 55 117 0.85 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_65 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 1 3 0.0039 0.78 2.4 0.0 187 220 94 125 59 130 0.79 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 2 3 3.3e-06 0.00066 12.5 0.0 132 231 218 308 202 332 0.82 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 3 3 0.057 11 -1.4 0.0 132 160 346 369 314 377 0.67 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_57 - 262 RuvB_N PF05496.7 234 0.001 12.0 0.0 1 1 7.1e-06 0.0014 11.5 0.0 48 75 97 124 45 170 0.84 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_87 - 504 AAA_19 PF13245.1 76 3.1e-09 30.4 0.0 1 1 1.3e-10 8.3e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_57 - 262 AAA_19 PF13245.1 76 7.4e-07 22.8 0.0 1 1 2.9e-08 1.9e-06 21.4 0.0 11 37 101 126 95 147 0.81 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 323 AAA_19 PF13245.1 76 0.0003 14.4 0.1 1 1 1.1e-05 0.00069 13.3 0.1 10 35 61 86 51 112 0.76 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_2 - 504 AAA_10 PF12846.2 304 1.9e-59 195.4 0.2 1 1 3e-61 3e-59 194.7 0.2 1 297 139 418 139 426 0.93 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 2_14 - 622 AAA_10 PF12846.2 304 2.1e-18 60.6 0.2 1 1 5.7e-20 5.6e-18 59.2 0.2 2 299 173 549 172 553 0.71 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_65 - 565 FAD_oxidored PF12831.2 428 5.8e-06 19.4 3.6 1 1 2.9e-08 5.8e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 DAO PF01266.19 358 8.4e-09 28.6 11.7 1 3 1.4e-08 2.7e-06 20.3 0.7 1 38 99 134 99 190 0.84 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 DAO PF01266.19 358 8.4e-09 28.6 11.7 2 3 0.032 6.3 -0.6 0.1 3 31 273 301 271 307 0.75 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 DAO PF01266.19 358 8.4e-09 28.6 11.7 3 3 9.4e-07 0.00019 14.3 0.5 152 208 314 372 307 433 0.74 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_87 - 504 ResIII PF04851.10 184 2.1e-06 21.5 0.0 1 1 8.3e-08 5.5e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_14 - 622 ResIII PF04851.10 184 0.00021 15.0 0.0 1 1 6.4e-06 0.00042 14.0 0.0 23 57 170 206 129 214 0.74 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 ResIII PF04851.10 184 0.001 12.8 0.1 1 2 0.00035 0.023 8.3 0.0 20 52 135 168 99 220 0.79 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 ResIII PF04851.10 184 0.001 12.8 0.1 2 2 0.031 2 2.0 0.1 137 155 316 350 230 382 0.59 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 Zot PF05707.7 193 0.00089 12.6 0.0 1 1 1.7e-05 0.0034 10.7 0.0 79 133 341 391 304 410 0.80 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_85 - 347 DUF3584 PF12128.3 1201 0.033 5.3 51.1 1 2 0.0051 1 0.4 32.3 377 534 86 242 42 246 0.65 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 DUF3584 PF12128.3 1201 0.033 5.3 51.1 2 2 2e-05 0.004 8.3 20.6 613 709 225 327 220 345 0.80 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_87 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 1 3 1.4e-05 0.0028 11.0 0.0 2 49 23 73 22 87 0.67 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 2 3 1.8e-05 0.0036 10.7 0.0 56 105 188 234 146 256 0.78 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 3 3 5.2e-05 0.01 9.2 0.0 176 227 404 462 344 467 0.75 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_65 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 1 3 0.0081 1.6 2.3 0.1 1 41 101 135 101 162 0.81 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 2 3 0.034 6.6 0.3 0.0 134 155 218 241 202 242 0.72 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 3 3 6.6e-06 0.0013 12.4 0.1 112 155 321 366 311 367 0.85 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_14 - 622 DEAD PF00270.24 169 4.6e-05 16.8 0.0 1 1 8.7e-07 8.6e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 DEAD PF00270.24 169 0.00091 12.6 0.4 1 1 4.7e-05 0.0047 10.3 0.3 13 133 138 314 125 373 0.66 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_57 - 262 DUF815 PF05673.8 250 0.00044 13.1 0.0 1 1 3.6e-06 0.00072 12.4 0.0 23 76 65 122 46 139 0.79 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_65 - 565 Pyr_redox PF00070.22 80 7.1e-20 65.1 6.0 1 2 1.4e-06 0.00028 15.2 1.5 1 31 99 129 99 131 0.96 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 Pyr_redox PF00070.22 80 7.1e-20 65.1 6.0 2 2 6.2e-18 1.2e-15 51.6 0.2 1 74 271 345 271 354 0.90 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_14 - 622 DUF853 PF05872.7 504 1.7e-06 20.5 0.0 1 1 1.4e-08 2.7e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_14 - 622 TrwB_AAD_bind PF10412.4 386 3.9e-19 62.3 0.0 1 2 8.9e-13 8.8e-11 34.8 0.0 10 54 167 211 161 314 0.70 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_14 - 622 TrwB_AAD_bind PF10412.4 386 3.9e-19 62.3 0.0 2 2 6.9e-10 6.9e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 TrwB_AAD_bind PF10412.4 386 1.2e-08 27.8 0.0 1 2 7.5e-06 0.00074 12.0 0.0 6 72 130 205 126 209 0.85 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 TrwB_AAD_bind PF10412.4 386 1.2e-08 27.8 0.0 2 2 2.7e-06 0.00027 13.5 0.1 230 302 329 401 296 419 0.67 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_87 - 504 AAA_11 PF13086.1 236 5.7e-07 23.2 0.1 1 1 3.8e-08 3.7e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_57 - 262 AAA_11 PF13086.1 236 0.00089 12.7 0.3 1 1 1.7e-05 0.0017 11.8 0.3 6 44 89 142 82 260 0.72 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_2 - 504 Guanylate_kin PF00625.16 183 5.6e-05 16.5 0.1 1 3 0.0021 0.41 3.9 0.0 3 26 140 163 138 193 0.85 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 Guanylate_kin PF00625.16 183 5.6e-05 16.5 0.1 2 3 0.005 0.99 2.7 0.1 75 115 284 325 268 390 0.83 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 Guanylate_kin PF00625.16 183 5.6e-05 16.5 0.1 3 3 0.0005 0.099 5.9 0.0 75 131 402 458 378 465 0.87 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_57 - 262 Sigma54_activ_2 PF14532.1 138 0.00059 13.8 0.1 1 1 7.7e-06 0.0015 12.4 0.0 3 44 79 122 77 151 0.81 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_14 - 622 T4SS-DNA_transf PF02534.9 469 4.8e-05 15.9 0.0 1 2 5.2e-07 0.0001 14.8 0.0 37 115 168 249 125 365 0.73 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_14 - 622 T4SS-DNA_transf PF02534.9 469 4.8e-05 15.9 0.0 2 2 0.097 19 -2.6 0.0 328 389 494 555 474 572 0.74 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_60 - 287 AAA_32 PF13654.1 509 0.00027 13.5 0.1 1 2 6.6e-06 0.0013 11.3 0.0 8 81 34 112 26 124 0.86 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_60 - 287 AAA_32 PF13654.1 509 0.00027 13.5 0.1 2 2 0.02 4.1 -0.3 0.1 472 502 255 285 242 286 0.89 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 2_14 - 622 ArgK PF03308.11 267 0.00021 13.9 0.0 1 1 1.8e-06 0.00037 13.2 0.0 12 68 158 209 153 214 0.88 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 5_3 - 372 tRNA_Me_trans PF03054.11 356 7.5e-05 15.2 0.0 1 2 1.1e-06 0.00023 13.6 0.0 2 71 52 122 51 144 0.74 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_3 - 372 tRNA_Me_trans PF03054.11 356 7.5e-05 15.2 0.0 2 2 0.042 8.2 -1.4 0.0 193 224 274 305 236 311 0.83 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_65 - 565 AlaDh_PNT_C PF01262.16 168 4.7e-05 16.9 3.1 1 2 0.00051 0.1 6.0 0.8 15 50 92 127 89 130 0.90 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 AlaDh_PNT_C PF01262.16 168 4.7e-05 16.9 3.1 2 2 2.1e-05 0.0042 10.5 0.1 16 58 265 307 257 339 0.84 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_87 - 504 UvrD-helicase PF00580.16 315 1.1e-16 54.9 3.9 1 2 5.8e-06 0.00057 13.1 0.1 2 38 8 44 7 64 0.81 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 UvrD-helicase PF00580.16 315 1.1e-16 54.9 3.9 2 2 6.8e-15 6.7e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_2 - 504 UvrD-helicase PF00580.16 315 0.0012 12.0 0.8 1 2 0.00071 0.07 6.2 0.0 11 41 137 167 132 174 0.86 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 UvrD-helicase PF00580.16 315 0.0012 12.0 0.8 2 2 0.0048 0.47 3.5 0.8 170 265 247 350 180 358 0.50 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_57 - 262 NACHT PF05729.7 166 0.0024 11.4 2.1 1 2 5.9e-05 0.012 9.2 0.3 3 23 102 122 100 148 0.84 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_57 - 262 NACHT PF05729.7 166 0.0024 11.4 2.1 2 2 0.012 2.3 1.7 0.1 80 127 156 200 139 221 0.76 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_57 - 262 AAA_25 PF13481.1 194 0.00021 14.6 0.0 1 1 7.2e-06 0.00035 13.8 0.0 29 57 95 123 76 170 0.86 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_2 - 504 AAA_25 PF13481.1 194 0.00033 13.9 0.0 1 1 1.8e-05 0.00087 12.6 0.0 36 86 142 182 135 225 0.82 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 2_34 - 262 AAA_25 PF13481.1 194 0.00077 12.7 0.0 1 1 2.4e-05 0.0012 12.1 0.0 42 91 12 51 11 134 0.78 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_14 - 622 AAA_25 PF13481.1 194 0.00078 12.7 0.0 1 1 4.9e-05 0.0024 11.1 0.0 20 137 159 265 145 272 0.78 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_57 - 262 AAA_28 PF13521.1 163 1.8e-05 18.6 1.1 1 1 4.6e-07 9.1e-05 16.3 0.8 1 24 101 124 101 239 0.90 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 323 AAA_5 PF07728.9 139 2e-18 60.4 0.0 1 1 3.2e-20 3.1e-18 59.7 0.0 2 125 64 188 63 197 0.94 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_57 - 262 AAA_5 PF07728.9 139 0.00038 14.1 0.2 1 1 8.6e-06 0.00085 12.9 0.2 1 19 101 119 101 243 0.78 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/4f168221-9226-403b-a626-53196374b9a2 # Target file: checkm_output/bins/pm1222/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1222/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4f168221-9226-403b-a626-53196374b9a2 checkm_output/bins/pm1222/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:54:36 2020 # [ok]