# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_8 - 281 UPF0020 PF01170.13 180 8.8e-05 15.1 0.0 1 2 0.0002 0.021 7.4 0.0 104 122 18 36 7 87 0.72 # 6994 # 7836 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 3_8 - 281 UPF0020 PF01170.13 180 8.8e-05 15.1 0.0 2 2 0.00078 0.083 5.4 0.0 28 41 163 176 158 185 0.85 # 6994 # 7836 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_7 - 334 Thymidylate_kin PF02223.12 186 0.00025 13.4 0.0 1 2 9.5e-06 0.001 11.5 0.0 3 36 14 47 12 50 0.94 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 Thymidylate_kin PF02223.12 186 0.00025 13.4 0.0 2 2 0.081 8.7 -1.4 0.0 162 181 254 273 220 292 0.64 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 7_3 - 389 MipZ PF09140.6 261 4.9e-06 18.7 0.7 1 2 3.1e-06 0.00034 12.7 0.1 2 47 108 153 107 157 0.87 # 1369 # 2535 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 7_3 - 389 MipZ PF09140.6 261 4.9e-06 18.7 0.7 2 2 0.0011 0.12 4.4 0.0 88 134 224 270 197 292 0.84 # 1369 # 2535 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_12 - 209 AAA_22 PF13401.1 131 6.3e-06 19.4 0.6 1 1 4.4e-07 2.3e-05 17.5 0.6 3 117 26 188 24 199 0.64 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 AAA_22 PF13401.1 131 7.5e-06 19.1 0.1 1 2 0.00026 0.014 8.6 0.0 4 25 7 28 3 77 0.80 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA_22 PF13401.1 131 7.5e-06 19.1 0.1 2 2 0.00035 0.019 8.2 0.0 81 123 222 268 207 274 0.81 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 MutS_V PF00488.16 235 6.1e-06 18.8 0.0 1 1 7.3e-08 7.9e-06 18.4 0.0 28 91 12 76 4 124 0.71 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 8_2 - 87 Rad60-SLD PF11976.3 72 7.1e-05 15.5 0.2 1 1 9.2e-07 9.8e-05 15.1 0.2 12 40 41 69 33 78 0.83 # 559 # 819 # 1 # ID=8_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.402 1_7 - 334 AAA_15 PF13175.1 415 4.1e-19 61.8 16.6 1 2 2.4e-08 1.3e-06 20.7 2.1 17 138 2 116 1 125 0.62 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA_15 PF13175.1 415 4.1e-19 61.8 16.6 2 2 2.6e-15 1.4e-13 43.6 12.1 266 415 113 274 87 274 0.75 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 AAA_15 PF13175.1 415 3.9e-12 38.8 2.5 1 2 4e-07 2.1e-05 16.7 3.2 12 89 17 95 2 126 0.58 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 AAA_15 PF13175.1 415 3.9e-12 38.8 2.5 2 2 4.9e-08 2.6e-06 19.6 0.0 365 415 153 199 140 199 0.88 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 3_8 - 281 N6_N4_Mtase PF01555.13 231 2.9e-28 91.9 0.0 1 1 1.1e-27 1.1e-25 83.4 0.0 1 214 21 186 21 191 0.86 # 6994 # 7836 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_7 - 334 AAA_17 PF13207.1 121 2.4e-05 18.2 0.1 1 1 1.6e-06 8.4e-05 16.4 0.1 1 22 9 30 9 130 0.72 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 AAA_17 PF13207.1 121 2.6e-05 18.0 1.5 1 1 8.1e-07 4.4e-05 17.3 1.5 2 20 30 48 29 182 0.68 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 AAA_21 PF13304.1 303 4.8e-27 88.6 6.9 1 1 3.9e-28 2.1e-26 86.5 6.9 2 302 10 274 9 275 0.62 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 AAA_21 PF13304.1 303 1.4e-19 64.1 1.4 1 1 7.4e-20 4e-18 59.3 1.4 1 302 29 199 29 200 0.87 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 7_3 - 389 ArsA_ATPase PF02374.10 305 1.9e-06 20.1 0.4 1 2 1.7e-06 0.00018 13.6 0.1 9 36 115 142 109 151 0.89 # 1369 # 2535 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 7_3 - 389 ArsA_ATPase PF02374.10 305 1.9e-06 20.1 0.4 2 2 0.0011 0.12 4.3 0.0 123 136 231 244 221 251 0.84 # 1369 # 2535 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_12 - 209 T2SE PF00437.15 272 2.9e-05 16.1 0.0 1 1 4.9e-07 5.3e-05 15.2 0.0 122 148 21 47 8 64 0.87 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 SMC_N PF02463.14 220 1.4e-08 27.2 2.7 1 1 2.1e-08 1.1e-06 21.0 2.7 24 204 27 201 14 207 0.61 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 SMC_N PF02463.14 220 2.2e-06 20.0 4.9 1 1 2.3e-06 0.00013 14.3 4.9 20 202 3 274 1 287 0.69 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 7_3 - 389 VirC1 PF07015.6 231 6.2e-05 15.1 0.1 1 2 0.00025 0.026 6.5 0.0 3 42 108 147 107 154 0.91 # 1369 # 2535 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 7_3 - 389 VirC1 PF07015.6 231 6.2e-05 15.1 0.1 2 2 0.0003 0.032 6.2 0.1 84 139 235 290 222 312 0.77 # 1369 # 2535 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_12 - 209 Arch_ATPase PF01637.13 234 1.3e-05 18.0 2.5 1 1 1.6e-06 8.7e-05 15.3 2.5 17 150 24 185 17 197 0.67 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 Arch_ATPase PF01637.13 234 4.9e-05 16.1 4.1 1 1 0.00076 0.041 6.5 4.1 26 71 13 61 4 279 0.59 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA_16 PF13191.1 185 2.2e-07 24.0 0.0 1 2 9.4e-06 0.0005 13.1 0.0 24 48 7 31 2 50 0.80 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA_16 PF13191.1 185 2.2e-07 24.0 0.0 2 2 0.00031 0.017 8.1 0.0 145 185 223 265 147 265 0.81 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 AAA_16 PF13191.1 185 1.5e-06 21.3 0.0 1 1 3.8e-08 2e-06 20.9 0.0 22 136 25 145 16 179 0.60 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 AAA_23 PF13476.1 202 3.9e-09 30.1 8.2 1 1 9.8e-11 5.3e-09 29.7 8.1 14 144 2 158 1 262 0.59 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 AAA_23 PF13476.1 202 0.00038 13.8 8.6 1 1 3.9e-05 0.0021 11.4 8.7 17 42 22 50 10 202 0.70 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 AAA_18 PF13238.1 129 2.4e-08 27.4 1.3 1 2 3.2e-07 1.7e-05 18.2 0.4 1 42 30 81 30 120 0.55 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 AAA_18 PF13238.1 129 2.4e-08 27.4 1.3 2 2 0.00029 0.016 8.6 0.2 34 92 150 205 93 208 0.74 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 AAA_18 PF13238.1 129 3.1e-06 20.5 0.2 1 2 1.1e-06 5.7e-05 16.5 0.0 1 48 10 69 10 113 0.75 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA_18 PF13238.1 129 3.1e-06 20.5 0.2 2 2 0.056 3 1.2 0.0 68 82 261 289 201 296 0.61 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 AAA_13 PF13166.1 712 8.4e-05 14.1 0.7 1 2 0.003 0.32 2.3 1.0 19 47 30 57 18 123 0.78 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 AAA_13 PF13166.1 712 8.4e-05 14.1 0.7 2 2 1.2e-05 0.0013 10.1 0.0 497 572 133 197 88 201 0.75 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 7_3 - 389 CbiA PF01656.18 195 1.1e-36 119.1 0.0 1 1 1.3e-38 1.4e-36 118.7 0.0 2 194 110 339 109 340 0.80 # 1369 # 2535 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_12 - 209 AAA_14 PF13173.1 128 7.8e-05 15.6 1.4 1 1 2.8e-06 0.0003 13.7 1.4 2 44 27 69 26 203 0.69 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 AAA_29 PF13555.1 62 7.7e-07 21.6 0.0 1 1 3.2e-08 1.7e-06 20.5 0.0 18 41 23 45 16 64 0.80 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 AAA_29 PF13555.1 62 3.7e-06 19.5 0.1 1 1 1.5e-07 7.8e-06 18.4 0.1 20 49 4 33 1 42 0.76 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA PF00004.24 132 5.3e-06 19.7 0.1 1 2 0.0014 0.15 5.3 0.0 1 21 10 30 10 60 0.74 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA PF00004.24 132 5.3e-06 19.7 0.1 2 2 1.2e-05 0.0013 12.0 0.1 57 116 225 275 214 289 0.74 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 MMR_HSR1 PF01926.18 116 2.9e-05 17.0 0.2 1 1 1.4e-06 7.7e-05 15.7 0.1 2 40 10 57 9 134 0.75 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 MMR_HSR1 PF01926.18 116 0.0007 12.6 2.0 1 1 2.9e-05 0.0016 11.4 2.0 2 19 30 47 29 204 0.78 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 DUF258 PF03193.11 161 1.9e-06 20.2 0.0 1 1 5.8e-08 3.1e-06 19.5 0.0 34 55 26 47 8 72 0.84 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 DUF258 PF03193.11 161 6.1e-05 15.2 0.1 1 1 2.1e-06 0.00011 14.4 0.1 33 58 5 30 1 73 0.83 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 7_3 - 389 AAA_31 PF13614.1 157 7.3e-10 32.0 0.0 1 2 9.5e-09 1e-06 21.8 0.0 2 49 108 155 107 195 0.91 # 1369 # 2535 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 7_3 - 389 AAA_31 PF13614.1 157 7.3e-10 32.0 0.0 2 2 0.00018 0.019 7.9 0.1 110 152 227 268 223 272 0.84 # 1369 # 2535 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_7 - 334 NTPase_1 PF03266.10 168 0.00073 12.3 0.1 1 2 0.00016 0.018 7.8 0.0 5 78 13 81 9 104 0.70 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 NTPase_1 PF03266.10 168 0.00073 12.3 0.1 2 2 0.0077 0.82 2.3 0.0 94 104 225 237 194 286 0.67 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA_33 PF13671.1 143 0.00063 12.6 0.0 1 1 1.4e-05 0.0015 11.4 0.0 1 21 9 29 9 77 0.85 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 3_8 - 281 Methyltransf_26 PF13659.1 117 1.8e-08 27.4 0.1 1 2 3.7e-08 4e-06 19.9 0.0 54 114 4 71 2 74 0.76 # 6994 # 7836 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 3_8 - 281 Methyltransf_26 PF13659.1 117 1.8e-08 27.4 0.1 2 2 0.0012 0.13 5.4 0.0 4 16 167 179 164 223 0.93 # 6994 # 7836 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_12 - 209 AAA_30 PF13604.1 196 0.00042 12.9 0.0 1 1 9.4e-06 0.001 11.7 0.0 16 38 25 47 21 55 0.88 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 DUF2813 PF11398.3 373 0.00032 12.8 3.9 1 2 0.002 0.21 3.5 0.1 18 48 2 33 1 44 0.80 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 DUF2813 PF11398.3 373 0.00032 12.8 3.9 2 2 3.1e-05 0.0034 9.4 0.9 240 334 176 282 106 287 0.59 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 Dynamin_N PF00350.18 168 0.00077 12.3 1.3 1 1 1.7e-05 0.0018 11.1 1.3 1 139 30 196 30 206 0.58 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 ABC_tran PF00005.22 137 3.3e-31 101.4 0.1 1 1 8.5e-33 4.5e-31 101.0 0.1 2 137 18 165 17 165 0.93 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 ABC_tran PF00005.22 137 9.7e-07 22.2 1.7 1 1 6e-08 3.2e-06 20.5 1.7 13 37 9 33 1 214 0.84 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 TIGR03263 TIGR03263 180 0.00041 12.7 0.2 1 1 8.8e-06 0.00094 11.5 0.0 3 20 29 46 27 55 0.87 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 3_8 - 281 Cons_hypoth95 PF03602.10 183 0.00022 13.6 0.0 1 2 0.00052 0.055 5.8 0.0 113 128 19 34 6 79 0.70 # 6994 # 7836 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 3_8 - 281 Cons_hypoth95 PF03602.10 183 0.00022 13.6 0.0 2 2 0.00056 0.06 5.7 0.0 41 56 162 177 145 179 0.83 # 6994 # 7836 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.567 1_12 - 209 AAA_19 PF13245.1 76 0.00013 14.7 0.0 1 1 3.1e-06 0.00033 13.4 0.0 9 31 26 47 20 50 0.86 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 AAA_10 PF12846.2 304 1.3e-07 24.3 0.0 1 2 5.8e-05 0.0031 9.9 0.0 2 26 8 32 7 134 0.86 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA_10 PF12846.2 304 1.3e-07 24.3 0.0 2 2 8.6e-06 0.00046 12.6 0.0 200 265 204 273 188 287 0.84 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 AAA_10 PF12846.2 304 2.5e-05 16.8 0.4 1 2 2.9e-06 0.00016 14.2 0.2 3 30 29 57 27 81 0.75 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 AAA_10 PF12846.2 304 2.5e-05 16.8 0.4 2 2 0.049 2.6 0.3 0.0 219 266 153 199 132 206 0.72 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 SbcCD_C PF13558.1 90 0.0001 15.2 0.1 1 1 6e-06 0.00064 12.7 0.1 31 88 135 179 111 181 0.82 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 ArgK PF03308.11 267 0.00034 12.4 0.0 1 1 5.2e-06 0.00056 11.7 0.0 16 50 14 48 4 57 0.83 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 AAA_25 PF13481.1 194 4.6e-05 15.9 0.0 1 2 4.8e-06 0.00025 13.4 0.0 30 50 24 44 4 55 0.77 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_12 - 209 AAA_25 PF13481.1 194 4.6e-05 15.9 0.0 2 2 0.066 3.5 -0.1 0.0 162 189 169 196 125 198 0.71 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 AAA_25 PF13481.1 194 0.00018 14.0 0.0 1 2 0.00011 0.0058 9.0 0.0 33 54 7 27 4 52 0.76 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA_25 PF13481.1 194 0.00018 14.0 0.0 2 2 0.0097 0.52 2.6 0.0 163 190 244 271 222 272 0.76 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_12 - 209 AAA_28 PF13521.1 163 4e-05 16.6 0.1 1 1 2.1e-06 0.00011 15.2 0.1 2 18 30 46 29 61 0.88 # 10834 # 11460 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_7 - 334 AAA_28 PF13521.1 163 0.00034 13.6 0.0 1 1 1.4e-05 0.00076 12.5 0.0 2 22 10 30 9 76 0.79 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA_5 PF07728.9 139 0.0002 14.1 0.1 1 2 0.00013 0.014 8.2 0.0 2 24 10 33 9 78 0.86 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 1_7 - 334 AAA_5 PF07728.9 139 0.0002 14.1 0.1 2 2 0.0031 0.33 3.7 0.1 49 90 167 254 119 261 0.65 # 4081 # 5082 # -1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.340 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/b3d41bc4-1a83-492f-8c1f-5ff0eb32616c # Target file: checkm_output/bins/pm121/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm121/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/b3d41bc4-1a83-492f-8c1f-5ff0eb32616c checkm_output/bins/pm121/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:54:26 2020 # [ok]