#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_3                  -            702 TraG-D_C             PF12696.2    128   7.9e-08   21.8   0.0   1   1   1.7e-08   1.6e-07   20.8   0.0     4    80   508   586   506   591 0.76 # 2792 # 4897 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596
1_3                  -            702 AAA_19               PF13245.1     76   4.7e-06   15.9   2.1   1   3     0.022      0.19    1.1   0.0    20    48   150   189   148   219 0.64 # 2792 # 4897 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596
1_3                  -            702 AAA_19               PF13245.1     76   4.7e-06   15.9   2.1   2   3   5.5e-05   0.00049    9.4   0.1     6    25   241   260   236   305 0.79 # 2792 # 4897 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596
1_3                  -            702 AAA_19               PF13245.1     76   4.7e-06   15.9   2.1   3   3    0.0077     0.069    2.6   0.0    34    63   562   588   545   603 0.75 # 2792 # 4897 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596
1_3                  -            702 DEAD                 PF00270.24   169   1.1e-05   14.5   0.0   1   2   0.00038    0.0034    6.4   0.0    16    41   247   272   235   364 0.85 # 2792 # 4897 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596
1_3                  -            702 DEAD                 PF00270.24   169   1.1e-05   14.5   0.0   2   2    0.0007    0.0063    5.5   0.0   113   134   497   519   484   579 0.81 # 2792 # 4897 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596
1_3                  -            702 TrwB_AAD_bind        PF10412.4    386   8.7e-10   27.1   0.0   1   2   0.00018    0.0016    6.5   0.0    10    63   240   295   234   410 0.78 # 2792 # 4897 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596
1_3                  -            702 TrwB_AAD_bind        PF10412.4    386   8.7e-10   27.1   0.0   2   2   4.7e-08   4.3e-07   18.3   0.0   247   323   508   586   499   589 0.74 # 2792 # 4897 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/16be4f55-40b3-4d5b-ae5b-e02be1dc81ff
# Target file:     checkm_output/bins/pm1171/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pm1171/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/16be4f55-40b3-4d5b-ae5b-e02be1dc81ff checkm_output/bins/pm1171/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:54:02 2020
# [ok]