# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_14 - 932 Mg_chelatase PF01078.16 207 1.1e-05 18.2 0.0 1 3 0.00026 0.04 6.5 0.0 12 48 292 329 280 365 0.65 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 Mg_chelatase PF01078.16 207 1.1e-05 18.2 0.0 2 3 0.00019 0.029 7.0 0.0 24 44 645 665 614 690 0.86 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 Mg_chelatase PF01078.16 207 1.1e-05 18.2 0.0 3 3 0.026 4 0.0 0.0 108 136 717 745 702 776 0.79 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 4_16 - 188 UPF0020 PF01170.13 180 2.1e-05 17.7 0.0 1 2 9.5e-07 0.00015 14.9 0.0 19 54 41 78 39 110 0.68 # 13914 # 14477 # 1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 4_16 - 188 UPF0020 PF01170.13 180 2.1e-05 17.7 0.0 2 2 0.012 1.8 1.6 0.0 91 116 98 122 87 138 0.82 # 13914 # 14477 # 1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 3_2 - 276 cobW PF02492.14 178 0.0031 10.5 1.4 1 2 5.4e-05 0.0083 9.1 0.7 3 21 40 58 38 80 0.88 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_2 - 276 cobW PF02492.14 178 0.0031 10.5 1.4 2 2 0.046 7.1 -0.5 0.0 93 132 179 215 145 249 0.67 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 4_16 - 188 RrnaAD PF00398.15 262 4.3e-07 22.7 0.0 1 1 3.8e-09 5.8e-07 22.2 0.0 9 113 29 128 26 140 0.90 # 13914 # 14477 # 1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 3_14 - 932 Torsin PF06309.6 127 0.00013 15.4 0.0 1 1 3.3e-06 0.00051 13.5 0.0 15 80 603 670 594 677 0.85 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 IstB_IS21 PF01695.12 178 1.3e-65 213.6 0.0 1 1 4.4e-67 3.4e-65 212.3 0.0 2 177 56 233 55 234 0.96 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 IstB_IS21 PF01695.12 178 1.6e-09 30.9 0.2 1 2 9.8e-06 0.00076 12.4 0.0 45 73 301 329 287 371 0.82 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 IstB_IS21 PF01695.12 178 1.6e-09 30.9 0.2 2 2 1.3e-06 0.0001 15.3 0.0 49 79 645 675 641 693 0.80 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 4_4 - 402 MipZ PF09140.6 261 2.9e-06 20.0 0.0 1 2 0.0027 0.41 3.1 0.0 3 50 111 163 109 193 0.73 # 3019 # 4224 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 4_4 - 402 MipZ PF09140.6 261 2.9e-06 20.0 0.0 2 2 8.7e-07 0.00013 14.6 0.0 87 136 233 282 220 296 0.87 # 3019 # 4224 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 4_18 - 181 SSB PF00436.20 104 1e-40 131.4 0.2 1 1 8.1e-43 1.3e-40 131.1 0.2 1 99 6 105 6 113 0.97 # 15253 # 15795 # 1 # ID=4_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.622 4_16 - 188 Methyltransf_18 PF12847.2 112 9.4e-08 26.2 0.0 1 1 9.9e-10 1.5e-07 25.5 0.0 2 107 51 144 50 146 0.90 # 13914 # 14477 # 1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_36 - 1754 UvrD_C_2 PF13538.1 104 1.2e-07 25.4 0.2 1 1 5.1e-09 7.8e-07 22.8 0.1 3 102 1340 1443 1336 1445 0.76 # 29791 # 35052 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.617 3_14 - 932 AAA_2 PF07724.9 171 4.9e-58 189.3 0.2 1 2 1.5e-05 0.0022 11.4 0.1 3 109 303 415 301 434 0.68 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_2 PF07724.9 171 4.9e-58 189.3 0.2 2 2 8.4e-56 1.3e-53 174.9 0.0 1 171 641 810 641 810 0.97 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_18 - 880 DUF87 PF01935.12 229 6.9e-06 19.5 0.0 1 1 4.3e-07 3.3e-05 17.3 0.0 26 222 484 674 479 681 0.82 # 11341 # 13980 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 3_14 - 932 DUF87 PF01935.12 229 0.00039 13.8 0.2 1 1 8.1e-05 0.0062 9.8 0.0 29 66 649 684 645 719 0.84 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_22 PF13401.1 131 6.1e-11 36.1 0.3 1 2 7.4e-06 0.00029 14.5 0.1 7 98 306 386 300 400 0.76 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_22 PF13401.1 131 6.1e-11 36.1 0.3 2 2 1.8e-06 6.9e-05 16.5 0.0 8 113 647 740 644 760 0.79 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 AAA_22 PF13401.1 131 1.9e-06 21.6 0.0 1 2 1.7e-05 0.00064 13.4 0.1 4 28 101 125 98 148 0.75 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_10 - 260 AAA_22 PF13401.1 131 1.9e-06 21.6 0.0 2 2 0.0033 0.13 6.0 0.0 77 101 151 178 124 201 0.64 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_2 - 276 AAA_22 PF13401.1 131 3.9e-06 20.6 0.4 1 1 2e-06 7.7e-05 16.4 0.4 4 127 37 214 34 218 0.76 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 1_36 - 1754 AAA_22 PF13401.1 131 0.00041 14.0 0.0 1 2 0.023 0.88 3.2 0.0 89 121 505 536 468 538 0.72 # 29791 # 35052 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.617 1_36 - 1754 AAA_22 PF13401.1 131 0.00041 14.0 0.0 2 2 0.0016 0.061 7.0 0.0 3 28 986 1011 983 1064 0.79 # 29791 # 35052 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.617 3_14 - 932 DNA_pol3_delta2 PF13177.1 162 3.2e-05 17.1 0.0 1 1 1.2e-06 0.00018 14.7 0.0 21 125 645 738 636 742 0.82 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_3 PF07726.6 131 2.1e-06 20.9 0.0 1 3 0.0014 0.21 4.7 0.0 4 23 308 327 306 332 0.87 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_3 PF07726.6 131 2.1e-06 20.9 0.0 2 3 0.0046 0.72 3.0 0.0 5 25 649 669 645 683 0.81 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_3 PF07726.6 131 2.1e-06 20.9 0.0 3 3 6.6e-05 0.01 9.0 0.0 64 111 717 764 696 768 0.89 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_2 - 276 AAA_15 PF13175.1 415 1.3e-05 17.9 0.0 1 2 0.00018 0.027 6.9 0.0 18 47 32 62 24 82 0.82 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_2 - 276 AAA_15 PF13175.1 415 1.3e-05 17.9 0.0 2 2 4.5e-05 0.0069 8.9 0.0 370 410 168 210 156 212 0.89 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 AAA_17 PF13207.1 121 6e-08 27.1 6.0 1 2 0.00033 0.025 8.9 0.0 4 52 308 372 307 446 0.61 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_17 PF13207.1 121 6e-08 27.1 6.0 2 2 5.4e-07 4.2e-05 17.9 0.3 6 34 650 682 646 881 0.79 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 AAA_17 PF13207.1 121 0.00059 14.2 0.0 1 1 1.3e-05 0.001 13.4 0.0 2 26 104 131 103 216 0.74 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_2 - 276 AAA_21 PF13304.1 303 8.6e-11 35.8 0.1 1 2 2.5e-06 0.00039 13.9 0.3 1 22 39 60 39 80 0.89 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_2 - 276 AAA_21 PF13304.1 303 8.6e-11 35.8 0.1 2 2 4.6e-08 7.1e-06 19.6 0.0 235 298 150 211 137 214 0.87 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 Miro PF08477.8 119 0.00074 13.6 0.0 1 1 4.3e-05 0.0066 10.5 0.0 3 43 307 346 306 382 0.72 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 MobB PF03205.9 140 0.00069 12.9 0.0 1 2 0.0062 0.96 2.7 0.0 5 26 308 329 307 339 0.86 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 MobB PF03205.9 140 0.00069 12.9 0.0 2 2 0.00025 0.038 7.2 0.0 3 28 646 671 644 686 0.83 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_2 - 276 Arf PF00025.16 175 0.0018 11.1 0.0 1 1 1.9e-05 0.0029 10.4 0.0 18 36 41 59 28 73 0.82 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 2_10 - 260 PhoH PF02562.11 205 4.9e-07 22.7 0.1 1 1 5e-09 7.7e-07 22.0 0.1 14 56 96 138 84 163 0.80 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_10 - 260 AFG1_ATPase PF03969.11 362 0.00047 12.5 0.0 1 1 5.8e-06 0.0009 11.6 0.0 64 214 103 251 81 258 0.78 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_2 - 276 G-alpha PF00503.15 389 0.0016 10.6 0.0 1 1 1.1e-05 0.0016 10.6 0.0 62 91 41 85 35 216 0.86 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 Zeta_toxin PF06414.7 201 1.3e-07 24.4 0.6 1 3 0.00095 0.15 4.6 0.0 16 41 303 328 289 338 0.81 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 Zeta_toxin PF06414.7 201 1.3e-07 24.4 0.6 2 3 0.064 9.8 -1.3 0.4 107 153 494 548 491 579 0.69 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 Zeta_toxin PF06414.7 201 1.3e-07 24.4 0.6 3 3 3.3e-07 5.1e-05 15.9 0.0 12 99 638 736 628 742 0.83 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_5 - 337 F420_oxidored PF03807.12 96 2e-05 18.5 0.0 1 1 2.7e-07 4.2e-05 17.5 0.0 1 73 147 212 147 236 0.81 # 3463 # 4473 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.634 3_14 - 932 Ribosomal_S7 PF00177.16 148 0.00064 12.8 0.1 1 1 9e-06 0.0014 11.7 0.1 42 143 291 387 270 392 0.89 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_2 - 276 SMC_N PF02463.14 220 6.4e-05 15.7 0.0 1 1 2.6e-05 0.0041 9.9 0.0 24 185 37 196 24 231 0.47 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 Arch_ATPase PF01637.13 234 5.7e-08 26.2 1.6 1 3 9.2e-05 0.014 8.5 0.1 3 43 286 326 284 334 0.85 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 Arch_ATPase PF01637.13 234 5.7e-08 26.2 1.6 2 3 0.00022 0.034 7.3 0.0 97 132 354 390 325 417 0.82 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 Arch_ATPase PF01637.13 234 5.7e-08 26.2 1.6 3 3 0.00031 0.048 6.8 0.0 24 64 647 686 637 743 0.80 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_16 PF13191.1 185 6.3e-16 52.4 4.8 1 3 1.3e-06 5.1e-05 16.8 0.0 2 47 284 326 283 337 0.88 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_16 PF13191.1 185 6.3e-16 52.4 4.8 2 3 0.00046 0.018 8.5 0.0 125 160 350 385 330 393 0.91 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_16 PF13191.1 185 6.3e-16 52.4 4.8 3 3 6e-09 2.3e-07 24.5 0.1 1 65 614 684 614 730 0.82 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_35 - 770 AAA_16 PF13191.1 185 2.1e-06 21.4 0.1 1 1 5.6e-07 2.2e-05 18.0 0.0 20 56 181 218 179 254 0.78 # 27482 # 29791 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 2_10 - 260 AAA_16 PF13191.1 185 2.3e-05 18.0 2.4 1 1 4.8e-06 0.00018 15.0 0.1 23 51 100 128 86 149 0.80 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_2 - 276 AAA_16 PF13191.1 185 0.00012 15.6 6.7 1 1 9.5e-06 0.00037 14.0 6.7 23 131 36 188 25 247 0.51 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 AAA_23 PF13476.1 202 3.9e-06 20.8 1.1 1 2 0.0021 0.16 5.7 1.0 23 201 307 565 287 613 0.47 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_23 PF13476.1 202 3.9e-06 20.8 1.1 2 2 4.6e-05 0.0035 11.2 0.0 22 59 646 683 640 820 0.66 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_2 - 276 AAA_23 PF13476.1 202 4.6e-05 17.3 0.0 1 1 8.3e-07 6.4e-05 16.8 0.0 10 40 27 58 23 99 0.85 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 AAA_18 PF13238.1 129 2e-09 31.4 4.0 1 2 1.1e-06 8.5e-05 16.4 0.0 3 75 308 377 307 389 0.80 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_18 PF13238.1 129 2e-09 31.4 4.0 2 2 2.4e-06 0.00018 15.3 0.1 3 23 648 676 647 786 0.74 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_2 - 276 AAA_18 PF13238.1 129 0.00074 13.4 0.0 1 1 4e-05 0.003 11.4 0.0 3 33 42 75 41 119 0.75 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_2 - 276 AAA_13 PF13166.1 712 0.00051 12.0 0.0 1 2 0.0045 0.7 1.7 0.0 17 39 38 60 27 84 0.87 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_2 - 276 AAA_13 PF13166.1 712 0.00051 12.0 0.0 2 2 4.9e-05 0.0076 8.2 0.0 527 579 169 220 162 230 0.85 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 4_4 - 402 CbiA PF01656.18 195 2.3e-18 59.8 0.0 1 1 5.6e-20 4.3e-18 58.9 0.0 1 142 111 292 111 327 0.76 # 3019 # 4224 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 2_10 - 260 CbiA PF01656.18 195 0.0015 11.5 0.0 1 1 2.5e-05 0.0019 11.1 0.0 3 42 105 145 104 254 0.75 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 AAA_14 PF13173.1 128 4.7e-09 29.8 0.0 1 2 9.5e-06 0.00073 13.0 0.0 6 73 307 387 302 440 0.76 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_14 PF13173.1 128 4.7e-09 29.8 0.0 2 2 4.5e-06 0.00035 14.0 0.0 7 87 648 742 644 767 0.70 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 AAA_14 PF13173.1 128 5.5e-07 23.1 0.0 1 2 3.4e-08 2.6e-06 20.9 0.0 3 97 102 203 100 219 0.64 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_10 - 260 AAA_14 PF13173.1 128 5.5e-07 23.1 0.0 2 2 0.096 7.4 0.0 0.0 14 46 215 247 212 257 0.80 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_5 - 337 Rossmann-like PF10727.4 127 0.00018 14.7 0.0 1 1 2.5e-06 0.00038 13.7 0.0 12 102 147 234 136 255 0.80 # 3463 # 4473 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.634 3_2 - 276 AAA_29 PF13555.1 62 3e-07 23.5 0.4 1 1 9.7e-09 7.4e-07 22.2 0.4 16 51 31 65 22 70 0.85 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 AAA_29 PF13555.1 62 4.6e-05 16.5 0.0 1 2 0.00031 0.024 7.8 0.0 20 48 300 328 292 334 0.80 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_29 PF13555.1 62 4.6e-05 16.5 0.0 2 2 0.0012 0.096 5.8 0.0 25 50 645 670 637 675 0.81 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA PF00004.24 132 3.7e-30 98.4 0.0 1 2 2.1e-19 1.6e-17 57.5 0.0 2 115 307 428 306 444 0.81 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA PF00004.24 132 3.7e-30 98.4 0.0 2 2 2.1e-13 1.6e-11 38.1 0.0 2 120 647 775 646 786 0.83 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 AAA PF00004.24 132 3.3e-08 27.3 0.0 1 1 8.2e-10 6.3e-08 26.4 0.0 1 70 104 175 104 207 0.82 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_10 - 260 Bac_DnaA PF00308.13 219 7.9e-09 28.9 0.0 1 1 7.8e-11 1.2e-08 28.4 0.0 36 136 103 201 90 209 0.84 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 CobU PF02283.11 167 0.0047 9.8 3.2 1 3 0.0025 0.39 3.6 0.0 87 125 347 385 335 394 0.83 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 CobU PF02283.11 167 0.0047 9.8 3.2 2 3 0.017 2.6 0.9 2.5 20 121 526 626 516 634 0.72 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 CobU PF02283.11 167 0.0047 9.8 3.2 3 3 0.013 2 1.3 0.0 2 80 647 723 646 775 0.72 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 Sigma54_activat PF00158.21 168 7.3e-13 41.8 0.1 1 2 0.00015 0.022 7.7 0.1 2 61 285 349 284 393 0.59 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 Sigma54_activat PF00158.21 168 7.3e-13 41.8 0.1 2 2 1.3e-11 2e-09 30.6 0.0 22 153 643 773 615 777 0.84 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 MMR_HSR1 PF01926.18 116 3.3e-05 17.4 0.0 1 2 0.00014 0.011 9.2 0.0 3 44 307 344 305 403 0.67 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 MMR_HSR1 PF01926.18 116 3.3e-05 17.4 0.0 2 2 0.0022 0.17 5.4 0.0 2 32 646 673 645 762 0.63 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_2 - 276 MMR_HSR1 PF01926.18 116 0.0013 12.2 0.0 1 1 3.6e-05 0.0028 11.2 0.0 3 20 41 58 39 96 0.86 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 4_16 - 188 N6_Mtase PF02384.11 311 0.00058 12.5 0.0 1 2 2.6e-05 0.0041 9.7 0.0 28 71 32 75 21 93 0.82 # 13914 # 14477 # 1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 4_16 - 188 N6_Mtase PF02384.11 311 0.00058 12.5 0.0 2 2 0.031 4.8 -0.4 0.0 124 137 111 124 97 132 0.81 # 13914 # 14477 # 1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 3_14 - 932 DUF258 PF03193.11 161 2e-06 20.6 0.0 1 2 7.8e-05 0.004 9.9 0.0 18 59 286 327 270 374 0.74 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 DUF258 PF03193.11 161 2e-06 20.6 0.0 2 2 0.00029 0.015 8.0 0.0 36 58 644 666 628 702 0.84 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_2 - 276 DUF258 PF03193.11 161 8.5e-06 18.5 0.1 1 1 2.6e-07 1.3e-05 17.9 0.1 34 67 36 69 16 95 0.81 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 2_10 - 260 DUF258 PF03193.11 161 0.00033 13.4 0.0 1 1 1.1e-05 0.00056 12.6 0.0 26 59 92 125 80 153 0.82 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_35 - 770 TraG-D_C PF12696.2 128 1.5e-19 63.7 0.0 1 1 2.2e-21 3.4e-19 62.5 0.0 1 127 419 541 419 542 0.88 # 27482 # 29791 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 3_5 - 337 NAD_binding_2 PF03446.10 163 1.4e-08 28.2 0.0 1 1 1.6e-10 2.4e-08 27.5 0.0 2 98 146 240 145 256 0.82 # 3463 # 4473 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.634 4_4 - 402 AAA_31 PF13614.1 157 0.00015 15.3 0.0 1 1 5.5e-06 0.00084 12.8 0.0 108 147 235 273 230 279 0.86 # 3019 # 4224 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 3_14 - 932 NTPase_1 PF03266.10 168 0.00019 14.6 0.3 1 3 0.00097 0.075 6.2 0.0 4 25 308 329 306 339 0.85 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 NTPase_1 PF03266.10 168 0.00019 14.6 0.3 2 3 0.082 6.3 -0.0 0.0 80 104 358 384 345 387 0.83 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 NTPase_1 PF03266.10 168 0.00019 14.6 0.3 3 3 0.0066 0.51 3.5 0.0 6 23 650 667 645 674 0.85 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 NTPase_1 PF03266.10 168 0.00035 13.8 0.1 1 2 0.003 0.23 4.6 0.1 2 30 104 132 103 143 0.82 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_10 - 260 NTPase_1 PF03266.10 168 0.00035 13.8 0.1 2 2 0.0006 0.046 6.9 0.0 87 108 155 176 141 202 0.77 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 AAA_33 PF13671.1 143 1.1e-06 22.2 0.2 1 3 0.0046 0.36 4.2 0.0 3 22 307 326 307 377 0.82 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_33 PF13671.1 143 1.1e-06 22.2 0.2 2 3 0.00013 0.01 9.2 0.0 3 79 647 756 646 762 0.55 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_33 PF13671.1 143 1.1e-06 22.2 0.2 3 3 0.026 2 1.8 0.1 55 81 825 851 765 859 0.60 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_2 - 276 AAA_33 PF13671.1 143 0.00015 15.2 0.4 1 1 4.8e-06 0.00037 13.9 0.4 2 20 40 61 39 121 0.67 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 4_16 - 188 Methyltransf_26 PF13659.1 117 1.1e-13 44.8 0.1 1 1 1.1e-15 1.7e-13 44.2 0.1 2 111 52 144 51 148 0.90 # 13914 # 14477 # 1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 3_5 - 337 2-Hacid_dh_C PF02826.14 178 1.5e-49 161.0 0.0 1 1 1.3e-51 2e-49 160.6 0.0 1 178 109 294 109 294 0.93 # 3463 # 4473 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.634 1_36 - 1754 AAA_30 PF13604.1 196 2.6e-45 147.9 7.6 1 2 1.3e-06 9.7e-05 15.5 1.4 10 126 425 536 422 560 0.85 # 29791 # 35052 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.617 1_36 - 1754 AAA_30 PF13604.1 196 2.6e-45 147.9 7.6 2 2 5.9e-43 4.6e-41 134.1 0.5 2 186 971 1158 970 1162 0.94 # 29791 # 35052 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.617 3_2 - 276 AAA_30 PF13604.1 196 8.2e-05 15.8 0.0 1 1 2.9e-06 0.00022 14.3 0.0 16 49 35 68 28 70 0.86 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 FtsK_SpoIIIE PF01580.13 205 0.00016 14.7 0.0 1 2 0.00051 0.04 6.9 0.0 19 69 284 334 269 337 0.80 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 FtsK_SpoIIIE PF01580.13 205 0.00016 14.7 0.0 2 2 0.0022 0.17 4.8 0.0 40 86 645 688 625 694 0.85 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_18 - 880 FtsK_SpoIIIE PF01580.13 205 0.00017 14.6 0.0 1 1 5.4e-06 0.00042 13.3 0.0 39 63 480 506 466 508 0.85 # 11341 # 13980 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 4_16 - 188 MTS PF05175.9 170 7.4e-11 35.2 0.0 1 1 6.6e-13 1e-10 34.8 0.0 24 142 43 150 38 170 0.84 # 13914 # 14477 # 1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 3_2 - 276 ABC_tran PF00005.22 137 2.2e-30 99.3 0.0 1 1 5.8e-32 3e-30 98.8 0.0 1 137 27 180 27 180 0.90 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 ABC_tran PF00005.22 137 2.9e-05 17.9 0.0 1 2 0.0057 0.29 4.9 0.0 15 42 307 332 298 382 0.77 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 ABC_tran PF00005.22 137 2.9e-05 17.9 0.0 2 2 0.00022 0.011 9.5 0.0 13 39 645 671 638 695 0.81 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 ABC_tran PF00005.22 137 0.00081 13.2 0.2 1 1 6.1e-05 0.0031 11.3 0.1 8 31 98 121 95 132 0.86 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 RuvB_N PF05496.7 234 4.6e-08 25.9 1.3 1 4 0.00018 0.027 7.0 0.0 16 75 274 328 261 337 0.67 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 RuvB_N PF05496.7 234 4.6e-08 25.9 1.3 2 4 0.0078 1.2 1.6 0.0 96 113 370 387 343 390 0.77 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 RuvB_N PF05496.7 234 4.6e-08 25.9 1.3 3 4 6.2e-06 0.00096 11.7 0.0 17 74 606 667 593 673 0.68 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 RuvB_N PF05496.7 234 4.6e-08 25.9 1.3 4 4 0.02 3 0.3 0.0 101 130 715 744 706 754 0.88 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_36 - 1754 AAA_19 PF13245.1 76 3.5e-06 20.3 0.5 1 1 6.8e-08 3.5e-06 20.3 0.5 8 74 984 1047 976 1050 0.71 # 29791 # 35052 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.617 3_14 - 932 AAA_19 PF13245.1 76 6.1e-06 19.5 0.1 1 2 5.2e-05 0.0027 11.0 0.0 9 37 304 329 296 368 0.80 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_19 PF13245.1 76 6.1e-06 19.5 0.1 2 2 0.0029 0.15 5.4 0.0 15 35 648 668 623 692 0.82 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 AAA_19 PF13245.1 76 0.001 12.3 0.2 1 1 7.9e-05 0.004 10.5 0.0 11 35 103 126 95 157 0.81 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 4_16 - 188 Methyltransf_2 PF00891.13 242 0.0016 11.1 0.0 1 1 1.5e-05 0.0023 10.6 0.0 111 159 60 110 40 126 0.84 # 13914 # 14477 # 1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_18 - 880 AAA_10 PF12846.2 304 1.5e-45 149.4 0.0 1 1 7.7e-47 2.4e-45 148.7 0.0 1 294 481 773 481 779 0.85 # 11341 # 13980 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_35 - 770 AAA_10 PF12846.2 304 2.4e-09 30.5 0.0 1 2 2.6e-05 0.00079 12.4 0.0 3 43 187 227 186 260 0.92 # 27482 # 29791 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 1_35 - 770 AAA_10 PF12846.2 304 2.4e-09 30.5 0.0 2 2 2.1e-06 6.4e-05 16.0 0.0 201 296 398 494 282 499 0.85 # 27482 # 29791 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 2_10 - 260 AAA_10 PF12846.2 304 5.7e-05 16.1 0.2 1 2 0.072 2.2 1.1 0.0 106 155 28 69 4 89 0.61 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_10 - 260 AAA_10 PF12846.2 304 5.7e-05 16.1 0.2 2 2 2.2e-05 0.00068 12.6 0.1 3 35 103 135 101 172 0.84 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 AAA_10 PF12846.2 304 0.00029 13.8 0.2 1 2 0.075 2.3 1.0 0.0 4 25 306 327 303 333 0.80 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_10 PF12846.2 304 0.00029 13.8 0.2 2 2 0.00067 0.021 7.7 0.0 3 48 645 703 644 908 0.71 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_2 - 276 AAA_10 PF12846.2 304 0.0011 11.9 0.9 1 1 9e-05 0.0028 10.6 0.4 4 25 40 61 37 70 0.81 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_28 - 192 NodS PF05401.6 201 0.0013 11.6 0.0 1 2 0.05 7.8 -0.7 0.0 42 154 35 60 20 69 0.62 # 21563 # 22138 # -1 # ID=3_28;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.675 3_28 - 192 NodS PF05401.6 201 0.0013 11.6 0.0 2 2 3.3e-05 0.0051 9.7 0.0 25 70 100 145 93 173 0.84 # 21563 # 22138 # -1 # ID=3_28;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.675 3_2 - 276 SbcCD_C PF13558.1 90 0.00048 13.6 0.1 1 1 2.6e-05 0.0041 10.6 0.1 27 89 146 195 130 196 0.79 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_5 - 337 ThiF PF00899.16 136 0.0039 10.5 5.4 1 3 0.017 2.6 1.4 0.1 78 117 8 47 5 61 0.77 # 3463 # 4473 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.634 3_5 - 337 ThiF PF00899.16 136 0.0039 10.5 5.4 2 3 0.00014 0.021 8.2 1.6 2 26 145 169 144 172 0.92 # 3463 # 4473 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.634 3_5 - 337 ThiF PF00899.16 136 0.0039 10.5 5.4 3 3 0.047 7.3 -0.1 0.0 84 111 192 220 172 229 0.78 # 3463 # 4473 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.634 3_14 - 932 ResIII PF04851.10 184 0.00024 14.5 0.0 1 3 0.011 1.8 1.9 0.0 10 45 289 323 285 336 0.79 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 ResIII PF04851.10 184 0.00024 14.5 0.0 2 3 0.029 4.4 0.6 0.0 143 160 372 389 335 430 0.70 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 ResIII PF04851.10 184 0.00024 14.5 0.0 3 3 0.00033 0.051 6.9 0.0 8 47 618 665 612 678 0.80 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 TIP49 PF06068.8 398 1e-05 17.9 1.0 1 3 0.002 0.31 3.1 0.0 54 75 307 328 278 337 0.77 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 TIP49 PF06068.8 398 1e-05 17.9 1.0 2 3 0.014 2.1 0.4 0.1 257 289 354 386 343 388 0.79 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 TIP49 PF06068.8 398 1e-05 17.9 1.0 3 3 1.2e-05 0.0019 10.4 0.0 21 75 610 668 584 682 0.77 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 DUF815 PF05673.8 250 9.1e-06 18.2 1.9 1 3 2e-05 0.0031 9.9 0.0 41 114 291 382 284 385 0.69 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 DUF815 PF05673.8 250 9.1e-06 18.2 1.9 2 3 0.075 12 -1.8 0.4 199 248 533 586 526 588 0.71 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 DUF815 PF05673.8 250 9.1e-06 18.2 1.9 3 3 0.00032 0.049 6.0 0.0 51 92 641 682 599 696 0.70 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 1_35 - 770 TrwB_AAD_bind PF10412.4 386 1.1e-148 488.4 0.0 1 1 1.8e-150 1.4e-148 488.1 0.0 2 386 172 561 171 561 0.99 # 27482 # 29791 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 1_18 - 880 TrwB_AAD_bind PF10412.4 386 2.3e-05 16.6 0.2 1 1 8e-07 6.2e-05 15.2 0.0 16 91 482 553 474 569 0.71 # 11341 # 13980 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 1_36 - 1754 AAA_11 PF13086.1 236 4e-05 16.8 2.4 1 2 9.3e-07 0.00014 15.0 0.0 2 72 971 1038 970 1065 0.82 # 29791 # 35052 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.617 1_36 - 1754 AAA_11 PF13086.1 236 4e-05 16.8 2.4 2 2 0.033 5.1 0.1 0.0 3 34 1182 1212 1180 1335 0.70 # 29791 # 35052 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.617 3_14 - 932 Sigma54_activ_2 PF14532.1 138 0.00015 15.4 0.0 1 2 0.00026 0.02 8.4 0.0 7 44 288 326 286 384 0.83 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 Sigma54_activ_2 PF14532.1 138 0.00015 15.4 0.0 2 2 0.0069 0.53 3.9 0.0 25 44 647 666 634 743 0.89 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 Sigma54_activ_2 PF14532.1 138 0.00061 13.4 0.0 1 1 1.3e-05 0.00097 12.7 0.0 9 64 87 144 84 229 0.70 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 1_35 - 770 T4SS-DNA_transf PF02534.9 469 2e-08 26.7 0.0 1 2 0.035 5.4 -1.1 0.0 128 199 260 330 249 359 0.73 # 27482 # 29791 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 1_35 - 770 T4SS-DNA_transf PF02534.9 469 2e-08 26.7 0.0 2 2 4.7e-10 7.2e-08 24.9 0.0 275 392 393 506 363 559 0.74 # 27482 # 29791 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564 4_16 - 188 TIGR00755 TIGR00755 256 1.5e-07 24.1 0.0 1 1 1.3e-09 2.1e-07 23.7 0.0 8 105 29 123 26 128 0.89 # 13914 # 14477 # 1 # ID=4_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.596 1_18 - 880 Pox_A32 PF04665.7 241 0.00011 15.0 0.0 1 1 1.5e-06 0.00024 14.0 0.0 6 40 474 508 470 523 0.82 # 11341 # 13980 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.543 3_14 - 932 RNA_helicase PF00910.17 107 1.7e-06 21.7 0.0 1 2 0.00031 0.048 7.4 0.0 3 23 308 328 307 346 0.86 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 RNA_helicase PF00910.17 107 1.7e-06 21.7 0.0 2 2 4.6e-05 0.0071 10.1 0.0 2 23 647 668 646 686 0.87 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 UPF0079 PF02367.12 123 0.00016 14.8 0.1 1 2 0.00078 0.12 5.5 0.0 19 39 307 327 296 334 0.87 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 UPF0079 PF02367.12 123 0.00016 14.8 0.1 2 2 0.00038 0.059 6.5 0.0 18 41 646 670 635 675 0.81 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_5 - 337 IlvN PF07991.7 165 2.5e-05 17.2 0.0 1 2 0.037 5.6 -0.2 0.0 50 77 35 62 19 69 0.76 # 3463 # 4473 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.634 3_5 - 337 IlvN PF07991.7 165 2.5e-05 17.2 0.0 2 2 9.6e-07 0.00015 14.7 0.0 2 90 143 231 142 238 0.82 # 3463 # 4473 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.634 3_14 - 932 AAA_24 PF13479.1 213 0.00037 13.6 0.0 1 2 0.0049 0.38 3.8 0.0 5 23 305 323 301 329 0.78 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_24 PF13479.1 213 0.00037 13.6 0.0 2 2 0.0004 0.031 7.3 0.0 6 26 646 666 642 737 0.68 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 AAA_24 PF13479.1 213 0.002 11.2 0.1 1 1 6.1e-05 0.0047 10.0 0.1 5 23 103 121 99 127 0.85 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 NACHT PF05729.7 166 3.5e-07 23.5 0.0 1 3 5.9e-05 0.0045 10.1 0.0 4 31 307 334 305 342 0.89 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 NACHT PF05729.7 166 3.5e-07 23.5 0.0 2 3 0.067 5.1 0.2 0.0 119 142 505 528 496 547 0.84 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 NACHT PF05729.7 166 3.5e-07 23.5 0.0 3 3 0.00051 0.039 7.1 0.0 3 24 646 667 644 678 0.86 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 NACHT PF05729.7 166 0.0002 14.6 0.0 1 1 4.1e-06 0.00032 13.9 0.0 3 49 104 151 102 200 0.81 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 2_10 - 260 AAA_25 PF13481.1 194 1.1e-06 21.7 0.1 1 1 6.7e-08 3.4e-06 20.1 0.1 9 60 72 128 68 201 0.77 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 AAA_25 PF13481.1 194 1.4e-06 21.3 0.0 1 2 5.6e-05 0.0029 10.5 0.0 37 111 307 384 300 417 0.78 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_25 PF13481.1 194 1.4e-06 21.3 0.0 2 2 0.00037 0.019 7.9 0.0 34 58 644 668 611 741 0.87 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_2 - 276 AAA_25 PF13481.1 194 2.9e-05 17.0 0.1 1 2 3.4e-06 0.00018 14.5 0.1 31 65 35 70 21 148 0.70 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_2 - 276 AAA_25 PF13481.1 194 2.9e-05 17.0 0.1 2 2 0.089 4.6 0.1 0.0 167 188 189 210 179 213 0.84 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 AAA_28 PF13521.1 163 5.4e-07 23.2 0.0 1 2 6.1e-05 0.0031 11.0 0.0 3 34 307 339 305 383 0.71 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_28 PF13521.1 163 5.4e-07 23.2 0.0 2 2 0.00028 0.015 8.8 0.0 2 22 646 666 645 687 0.85 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_2 - 276 AAA_28 PF13521.1 163 0.00011 15.7 0.1 1 1 4e-06 0.00021 14.8 0.1 3 75 41 112 39 117 0.78 # 931 # 1758 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.618 2_10 - 260 AAA_28 PF13521.1 163 0.00039 13.9 0.0 1 1 1.5e-05 0.00077 13.0 0.0 1 49 103 156 103 171 0.73 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 3_14 - 932 AAA_5 PF07728.9 139 1.5e-19 63.7 0.1 1 2 2.2e-07 1.7e-05 18.1 0.1 3 76 307 386 305 390 0.74 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 3_14 - 932 AAA_5 PF07728.9 139 1.5e-19 63.7 0.1 2 2 9.1e-15 7e-13 42.0 0.0 2 125 646 767 645 777 0.82 # 10512 # 13307 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.655 2_10 - 260 AAA_5 PF07728.9 139 2.8e-05 17.4 0.0 1 1 9.1e-07 7e-05 16.1 0.0 1 74 103 172 103 177 0.80 # 11102 # 11881 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.618 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/9dc2e775-b08b-4601-97ac-cc1472455b85 # Target file: checkm_output/bins/pm1160/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1160/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9dc2e775-b08b-4601-97ac-cc1472455b85 checkm_output/bins/pm1160/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:53:57 2020 # [ok]