# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_23 - 215 UPF0020 PF01170.13 180 1.4e-07 24.9 0.1 1 2 0.00077 0.044 7.0 0.0 102 118 16 32 3 43 0.79 # 14333 # 14977 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_23 - 215 UPF0020 PF01170.13 180 1.4e-07 24.9 0.1 2 2 1.5e-06 8.7e-05 15.8 0.0 26 54 161 189 157 207 0.87 # 14333 # 14977 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 2_56 - 200 UPF0020 PF01170.13 180 0.00064 13.0 0.0 1 1 1.6e-05 0.00093 12.4 0.0 31 98 110 176 79 185 0.76 # 50021 # 50620 # -1 # ID=2_56;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.593 1_1 - 260 UPF0020 PF01170.13 180 0.001 12.3 0.0 1 1 2.9e-05 0.0016 11.6 0.0 31 98 170 236 139 245 0.76 # 663 # 1442 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 2_39 - 65 cobW PF02492.14 178 0.00023 14.3 0.1 1 1 1.7e-06 0.00028 14.0 0.1 3 22 28 47 27 58 0.81 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_39 - 207 Seryl_tRNA_N PF02403.17 108 0.0037 11.0 8.6 1 2 0.018 3.1 1.6 0.6 52 89 97 117 59 130 0.58 # 24988 # 25608 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.731 1_39 - 207 Seryl_tRNA_N PF02403.17 108 0.0037 11.0 8.6 2 2 0.00018 0.031 8.0 8.4 25 101 122 195 83 199 0.83 # 24988 # 25608 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.731 1_78 - 73 IstB_IS21 PF01695.12 178 0.00069 12.7 0.0 1 1 4.3e-06 0.00073 12.6 0.0 48 78 26 60 3 63 0.79 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_2 - 231 MipZ PF09140.6 261 1e-08 28.2 0.2 1 2 1.8e-06 0.00016 14.5 0.0 2 39 3 39 2 45 0.87 # 770 # 1462 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.494 2_2 - 231 MipZ PF09140.6 261 1e-08 28.2 0.2 2 2 1.5e-05 0.0013 11.5 0.1 83 135 62 114 50 121 0.87 # 770 # 1462 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_30 - 281 MipZ PF09140.6 261 1.3e-06 21.3 0.0 1 2 0.00013 0.011 8.4 0.0 2 40 5 43 4 54 0.88 # 19329 # 20171 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.531 1_30 - 281 MipZ PF09140.6 261 1.3e-06 21.3 0.0 2 2 2.6e-05 0.0022 10.7 0.0 73 127 101 155 88 157 0.88 # 19329 # 20171 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.531 1_32 - 114 SSB PF00436.20 104 9.5e-07 22.4 0.1 1 1 6.9e-09 1.2e-06 22.1 0.1 2 103 2 94 1 95 0.87 # 20529 # 20870 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.494 1_56 - 1760 UvrD_C_2 PF13538.1 104 2.2e-08 27.9 0.2 1 1 8.1e-10 6.9e-08 26.3 0.2 4 103 1337 1440 1334 1441 0.64 # 36962 # 42241 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.631 2_15 - 1768 UvrD_C_2 PF13538.1 104 2.2e-08 27.9 0.2 1 1 8.5e-10 7.3e-08 26.2 0.2 4 103 1345 1448 1342 1449 0.64 # 14037 # 19340 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 2_35 - 1009 DUF87 PF01935.12 229 5.9e-07 23.1 0.1 1 1 5.7e-08 4.8e-06 20.2 0.0 26 214 483 662 469 676 0.75 # 34932 # 37958 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_74 - 461 DUF87 PF01935.12 229 3.4e-06 20.6 0.0 1 1 7.4e-08 6.3e-06 19.8 0.0 26 215 67 247 63 260 0.74 # 57551 # 58933 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 2_39 - 65 NB-ARC PF00931.17 287 0.00024 13.7 0.2 1 1 3e-06 0.00026 13.6 0.2 18 40 24 46 18 55 0.86 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 NB-ARC PF00931.17 287 0.00082 11.9 0.1 1 1 1.2e-05 0.00099 11.6 0.1 18 43 24 49 19 56 0.84 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_78 - 73 Septin PF00735.13 281 0.00011 14.9 0.0 1 1 6.7e-07 0.00012 14.9 0.0 6 32 27 53 23 69 0.87 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_39 - 65 AAA_22 PF13401.1 131 2.1e-05 18.4 0.1 1 1 5.6e-07 2.4e-05 18.2 0.1 3 28 24 49 21 59 0.85 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 AAA_22 PF13401.1 131 3.2e-05 17.8 0.0 1 1 8.3e-07 3.6e-05 17.6 0.0 5 32 26 53 21 70 0.80 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_56 - 1760 AAA_22 PF13401.1 131 0.00013 15.7 0.1 1 2 0.014 0.58 4.0 0.0 88 122 493 540 430 546 0.72 # 36962 # 42241 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.631 1_56 - 1760 AAA_22 PF13401.1 131 0.00013 15.7 0.1 2 2 0.0007 0.03 8.2 0.0 4 41 1002 1038 998 1120 0.73 # 36962 # 42241 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.631 2_15 - 1768 AAA_22 PF13401.1 131 0.00052 13.8 0.1 1 2 0.015 0.63 3.9 0.0 88 122 495 540 444 546 0.70 # 14037 # 19340 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 2_15 - 1768 AAA_22 PF13401.1 131 0.00052 13.8 0.1 2 2 0.0019 0.08 6.8 0.0 3 41 1009 1046 1006 1127 0.75 # 14037 # 19340 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 1_23 - 215 N6_N4_Mtase PF01555.13 231 2.4e-31 102.6 0.0 1 1 3.1e-31 5.2e-29 95.0 0.0 1 226 21 198 21 201 0.87 # 14333 # 14977 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 2_39 - 65 AAA_21 PF13304.1 303 0.00068 13.3 0.0 1 1 4.9e-06 0.00083 13.0 0.0 2 19 28 45 27 62 0.77 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_51 - 279 Adenylsucc_synt PF00709.16 421 0.0005 12.4 0.1 1 1 7.7e-06 0.00066 12.0 0.1 112 211 152 255 123 259 0.82 # 33645 # 34481 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.599 2_10 - 363 Adenylsucc_synt PF00709.16 421 0.002 10.4 0.1 1 1 3.1e-05 0.0027 10.0 0.1 112 210 199 301 172 324 0.78 # 10974 # 12062 # -1 # ID=2_10;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.599 1_78 - 73 Miro PF08477.8 119 9.2e-05 16.6 0.0 1 1 1.2e-06 0.0001 16.5 0.0 2 24 28 50 27 69 0.78 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_39 - 65 Miro PF08477.8 119 0.00039 14.6 0.0 1 1 5.2e-06 0.00044 14.4 0.0 3 25 29 51 27 63 0.82 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 MobB PF03205.9 140 2.5e-05 17.7 0.1 1 1 5.5e-07 3.1e-05 17.4 0.1 3 30 28 55 27 61 0.87 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_35 - 1009 MobB PF03205.9 140 0.00064 13.1 0.0 1 2 0.016 0.94 2.9 0.0 29 75 103 148 94 195 0.76 # 34932 # 37958 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 2_35 - 1009 MobB PF03205.9 140 0.00064 13.1 0.0 2 2 0.0013 0.076 6.4 0.0 4 28 484 508 482 523 0.82 # 34932 # 37958 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_74 - 461 MobB PF03205.9 140 0.0012 12.2 0.1 1 1 9.2e-05 0.0052 10.2 0.0 4 39 68 102 66 108 0.79 # 57551 # 58933 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 2_7 - 1384 Helicase_C PF00271.26 78 3.2e-17 55.9 0.0 1 1 3.5e-19 6e-17 55.0 0.0 3 78 1220 1296 1218 1296 0.97 # 4382 # 8533 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.643 2_2 - 231 ArsA_ATPase PF02374.10 305 1.3e-07 24.6 0.2 1 1 1.1e-09 1.9e-07 24.0 0.2 3 44 4 44 2 76 0.86 # 770 # 1462 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.494 2_39 - 65 T2SE PF00437.15 272 2.9e-06 20.0 0.0 1 1 3.6e-08 3.1e-06 19.9 0.0 123 151 20 48 14 56 0.84 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 T2SE PF00437.15 272 3.2e-05 16.5 0.2 1 1 4.2e-07 3.6e-05 16.4 0.2 127 155 24 52 17 61 0.86 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_39 - 65 Zeta_toxin PF06414.7 201 0.0016 11.2 0.1 1 1 1e-05 0.0018 11.1 0.1 20 44 29 53 20 56 0.86 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_2 - 231 VirC1 PF07015.6 231 8.7e-19 61.1 0.0 1 1 1.7e-20 1.4e-18 60.4 0.0 1 187 1 188 1 218 0.83 # 770 # 1462 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_30 - 281 VirC1 PF07015.6 231 4.4e-07 22.8 0.3 1 2 2.7e-06 0.00023 13.9 0.1 2 40 4 42 3 50 0.87 # 19329 # 20171 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.531 1_30 - 281 VirC1 PF07015.6 231 4.4e-07 22.8 0.3 2 2 0.00032 0.028 7.1 0.0 82 132 125 178 109 225 0.80 # 19329 # 20171 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.531 2_39 - 65 Arch_ATPase PF01637.13 234 0.00011 15.6 0.0 1 1 1.5e-06 0.00013 15.4 0.0 23 46 28 51 21 58 0.85 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 Arch_ATPase PF01637.13 234 0.00083 12.7 0.0 1 1 1.1e-05 0.00097 12.5 0.0 23 44 28 49 23 61 0.87 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_57 - 736 AAA_16 PF13191.1 185 1.6e-05 18.6 0.0 1 1 9.5e-07 4.1e-05 17.3 0.0 5 57 165 219 161 316 0.72 # 42238 # 44445 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.562 1_78 - 73 AAA_16 PF13191.1 185 7.8e-05 16.4 0.0 1 1 2.4e-06 0.0001 16.0 0.0 19 52 20 56 6 69 0.80 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_39 - 65 AAA_16 PF13191.1 185 0.00023 14.8 0.0 1 1 6.2e-06 0.00026 14.6 0.0 23 43 24 44 19 56 0.86 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_18 - 733 AAA_16 PF13191.1 185 0.00025 14.7 0.0 1 1 1.5e-05 0.00064 13.4 0.0 20 62 181 232 174 267 0.73 # 20119 # 22317 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_39 - 65 AAA_23 PF13476.1 202 2.5e-05 18.3 0.0 1 1 1.7e-07 2.9e-05 18.1 0.0 18 37 24 43 11 46 0.82 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_39 - 65 Kinesin PF00225.18 335 0.00045 12.6 0.1 1 1 2.7e-06 0.00045 12.6 0.1 66 95 17 45 3 60 0.73 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_30 - 281 CbiA PF01656.18 195 2.4e-23 76.2 0.0 1 1 5.2e-25 4.5e-23 75.3 0.0 1 160 6 196 6 226 0.82 # 19329 # 20171 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.531 2_2 - 231 CbiA PF01656.18 195 1.2e-16 54.3 0.5 1 1 2.4e-18 2.1e-16 53.6 0.5 1 142 4 125 4 182 0.82 # 770 # 1462 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.494 2_39 - 65 KaiC PF06745.8 227 0.0013 11.5 0.1 1 1 7.7e-06 0.0013 11.5 0.1 5 36 9 42 6 57 0.85 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 AAA_14 PF13173.1 128 0.00066 13.3 0.0 1 1 5e-06 0.00085 12.9 0.0 5 27 28 50 25 64 0.85 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_39 - 65 AAA_29 PF13555.1 62 2.6e-05 17.4 0.0 1 1 1.9e-07 3.3e-05 17.1 0.0 19 42 22 44 10 47 0.84 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_39 - 65 AAA PF00004.24 132 0.002 12.0 0.1 1 1 1.4e-05 0.0025 11.7 0.1 1 20 28 47 28 58 0.89 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_39 - 65 Bac_DnaA PF00308.13 219 0.0014 12.0 0.0 1 1 8.8e-06 0.0015 11.8 0.0 37 55 28 46 17 57 0.78 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 MMR_HSR1 PF01926.18 116 0.00013 15.6 0.0 1 1 9.2e-07 0.00016 15.3 0.0 2 24 28 49 27 64 0.78 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_56 - 200 N6_Mtase PF02384.11 311 5.8e-10 32.3 0.0 1 1 9.6e-12 8.2e-10 31.8 0.0 23 119 76 180 60 193 0.84 # 50021 # 50620 # -1 # ID=2_56;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.593 1_1 - 260 N6_Mtase PF02384.11 311 9.4e-10 31.6 0.0 1 1 1.7e-11 1.4e-09 31.0 0.0 23 119 136 240 118 253 0.83 # 663 # 1442 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_78 - 73 DUF258 PF03193.11 161 0.0015 11.4 0.1 1 1 9.9e-06 0.0017 11.2 0.1 38 61 28 51 21 61 0.84 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_57 - 736 TraG-D_C PF12696.2 128 1.2e-20 67.3 0.0 1 1 3.3e-22 2.8e-20 66.2 0.0 1 127 419 541 419 542 0.85 # 42238 # 44445 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.562 2_18 - 733 TraG-D_C PF12696.2 128 1.8e-15 50.6 0.0 1 1 4.4e-17 3.7e-15 49.6 0.0 1 127 419 541 419 542 0.84 # 20119 # 22317 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_2 - 231 AAA_31 PF13614.1 157 8.2e-11 35.7 0.0 1 2 2e-11 1.7e-09 31.4 0.0 2 43 3 43 2 57 0.91 # 770 # 1462 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.494 2_2 - 231 AAA_31 PF13614.1 157 8.2e-11 35.7 0.0 2 2 0.02 1.7 2.2 0.0 103 152 63 111 50 116 0.75 # 770 # 1462 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_30 - 281 AAA_31 PF13614.1 157 6.3e-08 26.4 0.0 1 2 8e-06 0.00069 13.2 0.0 1 38 4 41 4 53 0.92 # 19329 # 20171 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.531 1_30 - 281 AAA_31 PF13614.1 157 6.3e-08 26.4 0.0 2 2 3.9e-05 0.0033 11.0 0.0 85 154 91 162 77 164 0.81 # 19329 # 20171 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.531 1_78 - 73 NTPase_1 PF03266.10 168 0.00022 14.6 0.1 1 1 3.1e-06 0.00026 14.4 0.1 2 29 28 55 27 63 0.84 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_39 - 65 NTPase_1 PF03266.10 168 0.0015 11.9 0.1 1 1 2e-05 0.0017 11.7 0.1 2 23 28 49 27 58 0.84 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 DnaB_C PF03796.10 259 0.00095 11.7 0.0 1 1 5.8e-06 0.00099 11.7 0.0 22 47 28 53 12 61 0.83 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_23 - 215 Methyltransf_26 PF13659.1 117 8.4e-12 38.9 0.2 1 2 7.1e-08 4.1e-06 20.5 0.0 55 114 5 71 2 74 0.76 # 14333 # 14977 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_23 - 215 Methyltransf_26 PF13659.1 117 8.4e-12 38.9 0.2 2 2 1.4e-06 8.1e-05 16.3 0.1 4 35 167 197 164 213 0.82 # 14333 # 14977 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 2_56 - 200 Methyltransf_26 PF13659.1 117 1.3e-05 18.9 0.0 1 1 7.2e-07 4.1e-05 17.3 0.0 6 62 113 176 109 193 0.82 # 50021 # 50620 # -1 # ID=2_56;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.593 1_1 - 260 Methyltransf_26 PF13659.1 117 2.2e-05 18.1 0.0 1 1 1.3e-06 7.4e-05 16.5 0.0 6 62 173 236 170 252 0.82 # 663 # 1442 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 2_15 - 1768 AAA_30 PF13604.1 196 1.6e-43 142.2 10.4 1 2 0.0053 0.23 4.7 4.7 8 127 426 540 424 560 0.83 # 14037 # 19340 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 2_15 - 1768 AAA_30 PF13604.1 196 1.6e-43 142.2 10.4 2 2 2.8e-44 1.2e-42 139.4 0.3 2 185 994 1180 993 1185 0.93 # 14037 # 19340 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 1_56 - 1760 AAA_30 PF13604.1 196 1.3e-42 139.3 8.7 1 2 0.00088 0.038 7.2 3.1 8 127 426 540 423 567 0.85 # 36962 # 42241 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.631 1_56 - 1760 AAA_30 PF13604.1 196 1.3e-42 139.3 8.7 2 2 1.4e-42 6.1e-41 133.8 0.3 2 185 986 1172 985 1177 0.94 # 36962 # 42241 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.631 1_78 - 73 AAA_30 PF13604.1 196 0.00071 12.8 0.0 1 1 1.7e-05 0.00074 12.8 0.0 21 55 28 63 21 72 0.81 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_39 - 65 AAA_30 PF13604.1 196 0.00093 12.5 0.1 1 1 2.2e-05 0.00096 12.4 0.1 20 39 27 46 17 59 0.79 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_39 - 65 FtsK_SpoIIIE PF01580.13 205 1.1e-05 18.7 0.0 1 1 2.6e-07 1.1e-05 18.6 0.0 35 59 22 46 5 51 0.83 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_74 - 461 FtsK_SpoIIIE PF01580.13 205 2.1e-05 17.7 0.1 1 1 1.4e-06 6.1e-05 16.2 0.0 33 63 57 89 33 93 0.86 # 57551 # 58933 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 2_35 - 1009 FtsK_SpoIIIE PF01580.13 205 0.00016 14.8 0.1 1 1 2.6e-05 0.0011 12.1 0.0 34 64 474 506 450 510 0.84 # 34932 # 37958 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_78 - 73 FtsK_SpoIIIE PF01580.13 205 0.00023 14.3 0.0 1 1 5.5e-06 0.00024 14.3 0.0 39 60 23 47 4 55 0.78 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_39 - 65 ABC_tran PF00005.22 137 1.1e-05 19.5 0.2 1 1 2.2e-07 1.2e-05 19.3 0.2 13 38 27 52 18 63 0.80 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_74 - 461 ABC_tran PF00005.22 137 0.0011 13.0 0.0 1 1 4e-05 0.0023 11.9 0.0 12 42 65 95 61 193 0.72 # 57551 # 58933 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 1_56 - 1760 ABC_tran PF00005.22 137 0.015 9.3 4.0 1 1 0.0023 0.13 6.2 0.0 12 32 1003 1023 992 1034 0.82 # 36962 # 42241 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.631 1_78 - 73 TIGR03263 TIGR03263 180 0.00087 12.3 0.1 1 1 5.8e-06 0.00098 12.1 0.1 4 43 28 69 26 72 0.80 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_23 - 215 Cons_hypoth95 PF03602.10 183 0.0001 15.4 0.0 1 2 0.00054 0.092 5.8 0.0 112 127 18 33 2 77 0.83 # 14333 # 14977 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_23 - 215 Cons_hypoth95 PF03602.10 183 0.0001 15.4 0.0 2 2 0.00015 0.025 7.6 0.0 42 60 163 181 148 190 0.82 # 14333 # 14977 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_57 - 736 DAP3 PF10236.4 309 3.1e-05 16.6 0.0 1 1 3.3e-07 5.6e-05 15.8 0.0 22 56 184 219 169 236 0.83 # 42238 # 44445 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.562 2_15 - 1768 AAA_19 PF13245.1 76 3.2e-08 26.9 0.3 1 1 3.2e-09 1.8e-07 24.5 0.3 2 76 1001 1072 1000 1072 0.79 # 14037 # 19340 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 1_56 - 1760 AAA_19 PF13245.1 76 5.1e-07 23.1 1.3 1 1 3.2e-08 1.8e-06 21.3 0.2 10 76 1002 1064 994 1064 0.80 # 36962 # 42241 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.631 2_39 - 65 AAA_19 PF13245.1 76 0.00014 15.3 0.1 1 1 2.9e-06 0.00016 15.1 0.1 5 37 20 51 17 61 0.69 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_35 - 1009 AAA_10 PF12846.2 304 1.2e-51 169.6 0.2 1 1 6.9e-53 2e-51 168.9 0.2 1 293 480 768 480 774 0.90 # 34932 # 37958 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_74 - 461 AAA_10 PF12846.2 304 8.4e-48 156.9 0.1 1 1 4e-49 1.1e-47 156.5 0.1 1 289 64 348 64 358 0.90 # 57551 # 58933 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 1_57 - 736 AAA_10 PF12846.2 304 3.8e-10 33.3 0.0 1 1 7e-11 2e-09 30.9 0.0 3 296 187 494 186 501 0.68 # 42238 # 44445 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.562 2_18 - 733 AAA_10 PF12846.2 304 5.5e-08 26.2 0.0 1 1 2.6e-08 7.5e-07 22.5 0.0 3 291 187 488 186 498 0.73 # 20119 # 22317 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_39 - 65 AAA_10 PF12846.2 304 0.00011 15.3 0.1 1 1 4.2e-06 0.00012 15.2 0.1 2 23 26 47 25 57 0.84 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 AAA_10 PF12846.2 304 0.00013 15.1 0.0 1 1 5.4e-06 0.00015 14.9 0.0 2 31 26 55 26 67 0.88 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_23 - 215 Methyltransf_31 PF13847.1 152 0.00027 14.2 0.0 1 2 0.00027 0.046 7.0 0.0 71 112 17 74 4 117 0.75 # 14333 # 14977 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_23 - 215 Methyltransf_31 PF13847.1 152 0.00027 14.2 0.0 2 2 0.00074 0.13 5.5 0.0 3 36 163 193 161 197 0.86 # 14333 # 14977 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_39 - 207 DUF3584 PF12128.3 1201 4.4e-05 14.6 11.6 1 1 3.7e-07 6.3e-05 14.1 11.6 415 555 41 180 15 200 0.84 # 24988 # 25608 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.731 2_15 - 1768 Viral_helicase1 PF01443.13 234 0.00043 13.5 0.1 1 2 0.0046 0.78 2.8 0.0 3 21 1015 1033 1013 1132 0.79 # 14037 # 19340 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 2_15 - 1768 Viral_helicase1 PF01443.13 234 0.00043 13.5 0.1 2 2 0.00011 0.019 8.1 0.1 109 234 1322 1450 1311 1450 0.59 # 14037 # 19340 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 2_39 - 65 DUF2075 PF09848.4 352 0.0018 10.9 0.2 1 1 1.3e-05 0.0022 10.6 0.2 4 31 28 55 26 61 0.80 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_39 - 65 PduV-EutP PF10662.4 143 0.00021 14.5 0.1 1 1 2.7e-06 0.00023 14.3 0.1 3 24 27 48 25 59 0.83 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 PduV-EutP PF10662.4 143 0.00033 13.8 0.0 1 1 4.3e-06 0.00037 13.7 0.0 4 26 28 50 25 63 0.79 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_56 - 1760 DEAD PF00270.24 169 0.00027 14.1 0.0 1 1 7.3e-06 0.00062 12.9 0.0 1 55 987 1045 987 1082 0.84 # 36962 # 42241 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.631 2_39 - 65 DEAD PF00270.24 169 0.0013 11.9 0.1 1 1 1.6e-05 0.0014 11.8 0.1 12 32 23 43 16 56 0.81 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_57 - 736 DUF815 PF05673.8 250 1.5e-05 17.7 0.0 1 1 3.4e-07 2.9e-05 16.7 0.0 24 81 156 213 140 229 0.87 # 42238 # 44445 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.562 2_39 - 65 DUF815 PF05673.8 250 0.0013 11.4 0.1 1 1 1.9e-05 0.0016 11.0 0.1 52 79 24 51 20 54 0.90 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_57 - 736 TrwB_AAD_bind PF10412.4 386 2.2e-145 477.7 0.0 1 1 9.7e-147 2.8e-145 477.4 0.0 2 386 172 561 171 561 0.99 # 42238 # 44445 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.562 2_18 - 733 TrwB_AAD_bind PF10412.4 386 9.2e-141 462.5 0.0 1 1 4e-142 1.2e-140 462.2 0.0 2 385 172 560 171 561 0.99 # 20119 # 22317 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_74 - 461 TrwB_AAD_bind PF10412.4 386 5.3e-08 25.4 0.1 1 2 4.5e-07 1.3e-05 17.6 0.0 15 57 64 106 55 146 0.84 # 57551 # 58933 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 1_74 - 461 TrwB_AAD_bind PF10412.4 386 5.3e-08 25.4 0.1 2 2 0.0018 0.052 5.7 0.0 260 309 297 346 250 358 0.72 # 57551 # 58933 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 2_35 - 1009 TrwB_AAD_bind PF10412.4 386 7.3e-06 18.4 0.1 1 1 1.3e-06 3.6e-05 16.1 0.0 15 53 480 518 470 571 0.83 # 34932 # 37958 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 2_39 - 65 TrwB_AAD_bind PF10412.4 386 0.00052 12.3 0.0 1 1 1.8e-05 0.00053 12.3 0.0 12 38 22 48 10 56 0.81 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 TrwB_AAD_bind PF10412.4 386 0.0011 11.3 0.0 1 1 3.8e-05 0.0011 11.3 0.0 11 42 21 52 10 60 0.84 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_15 - 1768 AAA_11 PF13086.1 236 2.5e-05 17.6 0.0 1 2 4.4e-05 0.0038 10.5 0.0 3 70 995 1059 993 1081 0.82 # 14037 # 19340 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 2_15 - 1768 AAA_11 PF13086.1 236 2.5e-05 17.6 0.0 2 2 0.003 0.25 4.5 0.0 196 232 1092 1131 1083 1132 0.79 # 14037 # 19340 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 1_56 - 1760 AAA_11 PF13086.1 236 0.0002 14.6 0.0 1 2 0.00019 0.016 8.4 0.0 2 70 986 1051 985 1071 0.82 # 36962 # 42241 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.631 1_56 - 1760 AAA_11 PF13086.1 236 0.0002 14.6 0.0 2 2 0.0069 0.59 3.3 0.0 197 232 1085 1123 1078 1124 0.75 # 36962 # 42241 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.631 1_57 - 736 T4SS-DNA_transf PF02534.9 469 1.4e-11 37.2 0.0 1 2 0.0067 0.29 3.2 0.0 121 180 252 310 225 351 0.81 # 42238 # 44445 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.562 1_57 - 736 T4SS-DNA_transf PF02534.9 469 1.4e-11 37.2 0.0 2 2 1.3e-11 5.7e-10 31.9 0.0 291 392 408 506 360 525 0.83 # 42238 # 44445 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.562 2_18 - 733 T4SS-DNA_transf PF02534.9 469 4.8e-08 25.6 0.0 1 2 0.024 1 1.4 0.0 127 180 259 310 202 354 0.83 # 20119 # 22317 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_18 - 733 T4SS-DNA_transf PF02534.9 469 4.8e-08 25.6 0.0 2 2 1.3e-08 5.7e-07 22.0 0.0 284 371 402 486 364 539 0.80 # 20119 # 22317 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_35 - 1009 T4SS-DNA_transf PF02534.9 469 2.3e-05 16.8 0.9 1 1 1.1e-06 4.9e-05 15.7 0.7 164 384 545 776 464 795 0.75 # 34932 # 37958 # -1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.587 1_74 - 461 T4SS-DNA_transf PF02534.9 469 8.5e-05 14.9 0.1 1 1 5.9e-06 0.00025 13.3 0.0 308 370 286 347 244 361 0.81 # 57551 # 58933 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 2_18 - 733 PIF1 PF05970.9 364 0.00092 11.8 0.0 1 1 1.6e-05 0.0013 11.3 0.0 18 55 181 218 168 223 0.88 # 20119 # 22317 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_57 - 736 PIF1 PF05970.9 364 0.0016 11.0 0.0 1 1 3.1e-05 0.0027 10.3 0.0 15 55 178 218 165 223 0.85 # 42238 # 44445 # -1 # ID=1_57;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.562 1_78 - 73 GTP_EFTU PF00009.22 188 0.00033 13.8 0.0 1 1 2e-06 0.00034 13.7 0.0 3 30 25 52 23 69 0.84 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_78 - 73 Gtr1_RagA PF04670.7 232 0.00091 12.0 0.0 1 1 6e-06 0.001 11.9 0.0 2 30 28 56 27 65 0.89 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 1_78 - 73 RNA_helicase PF00910.17 107 0.00077 13.3 0.0 1 1 1.4e-05 0.0012 12.7 0.0 1 24 28 51 28 70 0.80 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_39 - 65 RNA_helicase PF00910.17 107 0.002 12.0 0.2 1 1 4.4e-05 0.0038 11.1 0.1 2 21 29 48 28 61 0.79 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_39 - 65 UPF0079 PF02367.12 123 0.00014 15.1 0.1 1 1 9.9e-07 0.00017 14.9 0.1 13 39 24 49 17 56 0.76 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_39 - 65 AAA_24 PF13479.1 213 6.7e-05 16.2 0.4 1 1 4.5e-07 7.7e-05 16.0 0.4 5 22 27 44 23 50 0.87 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 2_39 - 65 NACHT PF05729.7 166 1.4e-05 18.5 0.1 1 1 2e-07 1.7e-05 18.2 0.1 3 31 28 56 27 60 0.87 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_78 - 73 NACHT PF05729.7 166 0.00052 13.3 0.0 1 1 7.4e-06 0.00064 13.1 0.0 4 30 29 55 27 61 0.83 # 61142 # 61360 # -1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.530 2_39 - 65 AAA_25 PF13481.1 194 2.1e-05 17.6 0.0 1 1 3.8e-07 2.2e-05 17.6 0.0 30 62 22 54 10 63 0.79 # 39328 # 39522 # -1 # ID=2_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.528 1_74 - 461 AAA_25 PF13481.1 194 0.00031 13.8 0.0 1 2 0.0004 0.023 7.7 0.0 26 81 57 120 41 195 0.76 # 57551 # 58933 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 1_74 - 461 AAA_25 PF13481.1 194 0.00031 13.8 0.0 2 2 0.0079 0.45 3.5 0.0 145 191 277 320 244 323 0.81 # 57551 # 58933 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.596 2_2 - 231 AAA_25 PF13481.1 194 0.00051 13.1 0.1 1 1 2.5e-05 0.0014 11.7 0.1 41 65 10 34 3 52 0.81 # 770 # 1462 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_23 - 215 Methyltransf_15 PF09445.5 164 0.00015 15.0 0.0 1 2 0.023 3.9 0.7 0.0 53 79 4 29 2 34 0.91 # 14333 # 14977 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 1_23 - 215 Methyltransf_15 PF09445.5 164 0.00015 15.0 0.0 2 2 8.1e-06 0.0014 11.9 0.0 3 30 166 193 164 204 0.90 # 14333 # 14977 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.597 2_7 - 1384 SNF2_N PF00176.18 299 1.2e-62 205.0 0.0 1 1 1.1e-64 2e-62 204.3 0.0 1 299 906 1175 906 1175 0.95 # 4382 # 8533 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.643 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/c1f7b854-55b3-44aa-a599-c1ad97a39f6c # Target file: checkm_output/bins/pm110/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm110/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c1f7b854-55b3-44aa-a599-c1ad97a39f6c checkm_output/bins/pm110/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:53:18 2020 # [ok]