# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_5 - 584 Mg_chelatase PF01078.16 207 0.00049 12.3 0.3 1 2 0.021 2.2 0.3 0.0 25 62 11 48 9 65 0.76 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 Mg_chelatase PF01078.16 207 0.00049 12.3 0.3 2 2 6.7e-05 0.0071 8.5 0.1 22 55 326 360 317 392 0.75 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_68 - 722 UPF0020 PF01170.13 180 4.1e-08 26.0 0.0 1 1 7.3e-10 7.7e-08 25.1 0.0 30 122 229 327 225 334 0.75 # 55579 # 57744 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_5 - 584 Thymidylate_kin PF02223.12 186 5.6e-06 18.8 0.1 1 2 0.00041 0.044 6.1 0.0 3 47 15 59 13 73 0.86 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 Thymidylate_kin PF02223.12 186 5.6e-06 18.8 0.1 2 2 3.3e-05 0.0035 9.7 0.0 5 54 336 384 333 409 0.84 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_54 - 396 ABC_ATPase PF09818.4 448 0.00026 12.6 0.0 1 1 4e-06 0.00042 11.9 0.0 244 274 165 195 159 206 0.93 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_7 - 189 SRP_SPB PF02978.14 104 0.0015 11.8 0.0 1 2 0.00061 0.064 6.6 0.0 73 99 16 42 1 45 0.81 # 4920 # 5486 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.545 1_7 - 189 SRP_SPB PF02978.14 104 0.0015 11.8 0.0 2 2 0.0066 0.7 3.2 0.0 76 101 112 137 97 140 0.89 # 4920 # 5486 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.545 2_14 - 260 IstB_IS21 PF01695.12 178 1.5e-72 235.7 0.1 1 2 0.098 5.2 -0.6 0.0 64 97 25 57 24 61 0.64 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_14 - 260 IstB_IS21 PF01695.12 178 1.5e-72 235.7 0.1 2 2 6e-74 3.2e-72 234.7 0.0 1 178 56 235 56 235 0.98 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_5 - 584 IstB_IS21 PF01695.12 178 2.3e-11 36.4 0.1 1 2 2.8e-06 0.00015 14.2 0.0 50 84 11 45 2 50 0.90 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 IstB_IS21 PF01695.12 178 2.3e-11 36.4 0.1 2 2 1.5e-07 7.8e-06 18.4 0.0 49 83 329 363 311 384 0.85 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_29 - 209 MipZ PF09140.6 261 1.8e-21 69.3 0.5 1 2 2.4e-12 1.3e-10 33.8 0.0 2 53 2 52 1 60 0.89 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_29 - 209 MipZ PF09140.6 261 1.8e-21 69.3 0.5 2 2 3.2e-12 1.7e-10 33.4 0.0 87 140 65 118 58 128 0.92 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_5 - 584 MipZ PF09140.6 261 4.3e-08 25.5 2.8 1 2 0.00012 0.0062 8.6 0.0 8 39 15 46 10 63 0.89 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 MipZ PF09140.6 261 4.3e-08 25.5 2.8 2 2 3.3e-06 0.00018 13.6 0.6 6 39 332 365 327 464 0.62 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 YhjQ PF06564.7 244 2.5e-09 29.8 0.1 1 2 4.1e-07 2.2e-05 16.9 0.0 10 52 16 58 11 154 0.64 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 YhjQ PF06564.7 244 2.5e-09 29.8 0.1 2 2 9.5e-05 0.005 9.1 0.0 10 48 335 373 328 400 0.83 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_29 - 209 YhjQ PF06564.7 244 2.5e-05 16.7 0.3 1 2 3.6e-06 0.00019 13.8 0.3 4 38 3 37 1 50 0.89 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_29 - 209 YhjQ PF06564.7 244 2.5e-05 16.7 0.3 2 2 0.059 3.1 0.0 0.0 108 144 69 103 44 113 0.78 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_5 - 584 3HCDH_N PF02737.13 180 0.00057 12.5 0.0 1 1 2e-05 0.0021 10.7 0.0 5 35 338 368 336 409 0.75 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_36 - 731 DUF87 PF01935.12 229 0.00034 13.4 0.2 1 1 9.9e-06 0.001 11.8 0.0 13 38 127 151 120 159 0.85 # 21760 # 23952 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 2_5 - 584 NB-ARC PF00931.17 287 2e-07 23.1 0.1 1 2 0.0013 0.14 3.9 0.0 21 36 10 25 3 36 0.86 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 NB-ARC PF00931.17 287 2e-07 23.1 0.1 2 2 1.6e-07 1.7e-05 16.7 0.0 17 53 325 360 314 403 0.79 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_14 - 260 AAA_22 PF13401.1 131 2.5e-06 20.7 0.2 1 2 0.0001 0.0022 11.2 0.0 5 22 103 120 99 137 0.83 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_14 - 260 AAA_22 PF13401.1 131 2.5e-06 20.7 0.2 2 2 0.0027 0.058 6.5 0.0 88 103 155 181 126 203 0.67 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 1_54 - 396 AAA_22 PF13401.1 131 3.4e-06 20.2 0.0 1 1 3.1e-07 6.6e-06 19.3 0.0 3 28 164 189 159 296 0.60 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_5 - 584 AAA_22 PF13401.1 131 2.9e-05 17.2 0.2 1 2 0.042 0.89 2.7 0.0 7 68 11 67 8 127 0.72 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_22 PF13401.1 131 2.9e-05 17.2 0.2 2 2 0.00012 0.0026 10.9 0.1 3 65 326 380 323 500 0.69 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_43 - 1016 AAA_22 PF13401.1 131 0.00038 13.6 0.0 1 1 0.00017 0.0036 10.4 0.0 8 27 497 516 490 566 0.87 # 31236 # 34283 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 2_12 - 329 AAA_22 PF13401.1 131 0.00089 12.4 0.0 1 1 0.00021 0.0044 10.2 0.0 7 30 12 35 6 159 0.55 # 8951 # 9937 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.490 2_5 - 584 ATP_bind_1 PF03029.12 238 4e-05 16.2 2.7 1 2 0.002 0.1 5.0 0.1 2 37 14 49 13 53 0.90 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 ATP_bind_1 PF03029.12 238 4e-05 16.2 2.7 2 2 6e-05 0.0032 10.0 0.2 2 37 333 368 332 371 0.95 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_54 - 396 ATP_bind_1 PF03029.12 238 0.0011 11.5 0.0 1 1 4.1e-05 0.0022 10.5 0.0 1 22 170 191 170 198 0.91 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_5 - 584 SRP54 PF00448.17 196 2.5e-09 29.8 2.8 1 2 4.4e-05 0.0024 10.3 0.0 2 38 9 45 8 68 0.93 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 SRP54 PF00448.17 196 2.5e-09 29.8 2.8 2 2 1.5e-07 7.7e-06 18.4 0.0 3 38 329 364 327 401 0.92 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_29 - 209 SRP54 PF00448.17 196 2.7e-07 23.2 0.1 1 1 3e-08 1.6e-06 20.7 0.1 4 98 2 91 1 134 0.80 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_11 - 576 AAA_15 PF13175.1 415 6.1e-12 38.2 0.0 1 2 1.2e-07 1.2e-05 17.4 0.0 1 45 4 47 4 93 0.87 # 7227 # 8954 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.494 2_11 - 576 AAA_15 PF13175.1 415 6.1e-12 38.2 0.0 2 2 4.2e-08 4.5e-06 18.9 0.0 318 414 232 320 176 321 0.80 # 7227 # 8954 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.494 2_29 - 209 AAA_17 PF13207.1 121 2.3e-05 18.2 0.0 1 1 8.5e-07 4.5e-05 17.3 0.0 9 77 11 84 9 205 0.76 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_5 - 584 AAA_17 PF13207.1 121 3.8e-05 17.5 0.8 1 2 0.019 1 3.2 0.6 3 20 12 29 11 145 0.78 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_17 PF13207.1 121 3.8e-05 17.5 0.8 2 2 4.5e-05 0.0024 11.7 0.0 2 32 330 362 329 456 0.58 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_11 - 576 AAA_21 PF13304.1 303 1.4e-22 73.9 0.0 1 1 5.8e-24 2.1e-22 73.4 0.0 1 302 26 321 26 322 0.91 # 7227 # 8954 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.494 2_20 - 935 AAA_21 PF13304.1 303 1.1e-06 21.7 0.6 1 1 8.9e-08 3.2e-06 20.3 0.1 219 302 734 858 608 859 0.65 # 15461 # 18265 # 1 # ID=2_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_54 - 396 AAA_21 PF13304.1 303 0.0005 13.0 0.0 1 1 2.2e-05 0.00076 12.4 0.0 3 24 169 190 167 219 0.75 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_54 - 396 Miro PF08477.8 119 0.0006 13.3 0.0 1 1 1.3e-05 0.0014 12.2 0.0 4 35 170 200 169 256 0.76 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_5 - 584 MobB PF03205.9 140 3e-06 20.0 0.1 1 2 0.00058 0.02 7.6 0.0 4 38 12 45 9 88 0.79 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 MobB PF03205.9 140 3e-06 20.0 0.1 2 2 9.9e-05 0.0035 10.1 0.0 3 49 330 376 328 413 0.83 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_29 - 209 MobB PF03205.9 140 6.3e-05 15.7 0.1 1 1 4.8e-06 0.00017 14.3 0.0 10 42 11 41 1 46 0.79 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_54 - 396 MobB PF03205.9 140 0.00078 12.2 0.0 1 1 4e-05 0.0014 11.3 0.0 4 25 169 190 167 196 0.89 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_5 - 584 ArsA_ATPase PF02374.10 305 3.3e-132 433.1 0.0 1 3 7.5e-92 2.7e-90 295.4 0.0 2 300 9 292 8 296 0.97 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 ArsA_ATPase PF02374.10 305 3.3e-132 433.1 0.0 2 3 5.6e-35 2e-33 108.7 0.1 3 162 329 476 327 486 0.91 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 ArsA_ATPase PF02374.10 305 3.3e-132 433.1 0.0 3 3 1.1e-09 3.8e-08 25.6 0.0 200 299 483 581 474 583 0.86 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_2 - 135 ArsA_ATPase PF02374.10 305 2.2e-12 39.6 0.0 1 1 6.5e-14 2.3e-12 39.5 0.0 199 300 33 133 4 134 0.90 # 650 # 1054 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_29 - 209 ArsA_ATPase PF02374.10 305 3.3e-08 25.8 0.4 1 1 3.5e-09 1.2e-07 24.0 0.1 3 48 3 48 1 69 0.85 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_14 - 260 PhoH PF02562.11 205 2.1e-08 26.6 0.3 1 2 0.013 0.68 2.1 0.0 48 111 5 67 1 77 0.79 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_14 - 260 PhoH PF02562.11 205 2.1e-08 26.6 0.3 2 2 9.2e-09 4.9e-07 22.1 0.0 11 48 94 131 84 145 0.81 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_5 - 584 PhoH PF02562.11 205 2.8e-08 26.2 0.5 1 2 5.2e-05 0.0027 9.9 0.1 21 63 10 52 2 110 0.87 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 PhoH PF02562.11 205 2.8e-08 26.2 0.5 2 2 4.6e-06 0.00024 13.3 0.0 12 47 318 355 308 379 0.79 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_54 - 396 T2SE PF00437.15 272 2.7e-35 114.5 0.0 1 1 6.8e-37 3.6e-35 114.1 0.0 9 270 35 315 28 317 0.86 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_5 - 584 T2SE PF00437.15 272 0.00025 13.0 0.0 1 2 0.04 2.1 0.1 0.0 131 162 11 42 2 56 0.79 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 T2SE PF00437.15 272 0.00025 13.0 0.0 2 2 3.6e-05 0.0019 10.1 0.0 126 155 325 354 183 374 0.77 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_41 - 194 TIGR00810 TIGR00810 73 0.006 9.4 9.9 1 2 3.9e-05 0.0042 9.9 0.8 49 70 96 117 95 120 0.87 # 29451 # 30032 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 1_41 - 194 TIGR00810 TIGR00810 73 0.006 9.4 9.9 2 2 0.0034 0.36 3.7 2.6 48 71 124 147 122 149 0.85 # 29451 # 30032 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 2_11 - 576 SMC_N PF02463.14 220 2.5e-12 39.4 0.0 1 2 2.6e-11 1.4e-09 30.5 0.0 2 55 4 55 3 64 0.89 # 7227 # 8954 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.494 2_11 - 576 SMC_N PF02463.14 220 2.5e-12 39.4 0.0 2 2 0.00049 0.026 6.7 0.0 161 205 278 324 256 336 0.84 # 7227 # 8954 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.494 2_20 - 935 SMC_N PF02463.14 220 9.1e-09 27.8 0.6 1 2 0.0029 0.15 4.2 0.0 20 42 324 346 318 364 0.85 # 15461 # 18265 # 1 # ID=2_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_20 - 935 SMC_N PF02463.14 220 9.1e-09 27.8 0.6 2 2 1.2e-08 6.4e-07 21.8 0.2 74 215 441 871 409 876 0.84 # 15461 # 18265 # 1 # ID=2_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_29 - 209 VirC1 PF07015.6 231 2.9e-09 29.3 0.0 1 1 1.2e-10 6.3e-09 28.2 0.0 3 172 2 164 1 206 0.75 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_5 - 584 VirC1 PF07015.6 231 0.00017 13.7 0.8 1 2 0.002 0.11 4.5 0.0 9 40 15 46 10 61 0.89 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 VirC1 PF07015.6 231 0.00017 13.7 0.8 2 2 0.00028 0.015 7.3 0.1 10 44 335 369 329 379 0.87 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 Fer4_NifH PF00142.13 273 2.8e-13 42.6 0.1 1 2 3e-09 1.6e-07 23.7 0.0 5 58 13 65 10 89 0.81 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 Fer4_NifH PF00142.13 273 2.8e-13 42.6 0.1 2 2 8.4e-07 4.4e-05 15.7 0.0 3 62 330 388 329 406 0.77 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_29 - 209 Fer4_NifH PF00142.13 273 7.9e-05 14.9 0.0 1 1 4.6e-06 0.00024 13.3 0.0 8 38 9 39 2 46 0.89 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_5 - 584 Arch_ATPase PF01637.13 234 0.00053 12.7 0.0 1 2 0.017 0.89 2.1 0.0 22 128 10 124 2 149 0.59 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 Arch_ATPase PF01637.13 234 0.00053 12.7 0.0 2 2 0.00024 0.013 8.2 0.0 15 62 322 366 313 469 0.59 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_14 - 260 Arch_ATPase PF01637.13 234 0.00093 11.9 0.1 1 1 5e-05 0.0026 10.4 0.1 8 38 90 120 87 201 0.81 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 1_36 - 731 tRNA_U5-meth_tr PF05958.6 352 0.00069 11.3 0.3 1 1 1e-05 0.0011 10.6 0.3 108 171 237 300 208 303 0.84 # 21760 # 23952 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 2_5 - 584 AAA_16 PF13191.1 185 6.8e-09 28.9 1.3 1 2 4.1e-05 0.0015 11.5 0.3 23 130 7 101 3 261 0.79 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_16 PF13191.1 185 6.8e-09 28.9 1.3 2 2 4.3e-06 0.00015 14.7 0.0 17 83 320 385 312 461 0.61 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_54 - 396 AAA_16 PF13191.1 185 6.2e-05 16.0 0.0 1 1 3.9e-06 0.00014 14.9 0.0 27 81 168 240 156 322 0.69 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 260 AAA_16 PF13191.1 185 8.6e-05 15.5 0.9 1 1 6e-06 0.00021 14.3 0.1 9 41 90 119 87 191 0.83 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_11 - 576 AAA_23 PF13476.1 202 3.1e-13 43.5 0.0 1 1 1.6e-14 4.3e-13 43.0 0.0 2 104 7 99 6 222 0.76 # 7227 # 8954 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.494 1_54 - 396 AAA_23 PF13476.1 202 4.9e-07 23.2 0.0 1 1 3.4e-08 8.9e-07 22.4 0.0 18 40 164 186 149 226 0.86 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_20 - 935 AAA_23 PF13476.1 202 2e-06 21.2 3.6 1 1 7.5e-08 2e-06 21.2 3.6 10 195 319 578 315 584 0.69 # 15461 # 18265 # 1 # ID=2_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_5 - 584 AAA_23 PF13476.1 202 0.00019 14.8 0.0 1 1 8.8e-05 0.0023 11.2 0.0 18 47 326 355 312 493 0.78 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_18 PF13238.1 129 0.00065 13.0 1.7 1 2 0.0051 0.54 3.6 0.1 2 21 12 31 11 63 0.78 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_18 PF13238.1 129 0.00065 13.0 1.7 2 2 0.00021 0.023 8.0 0.2 1 23 330 352 330 415 0.79 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 CbiA PF01656.18 195 2.4e-29 95.1 0.0 1 2 4.7e-16 2.5e-14 46.1 0.0 4 161 13 240 10 264 0.70 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 CbiA PF01656.18 195 2.4e-29 95.1 0.0 2 2 2.7e-16 1.4e-14 46.9 0.0 4 157 332 528 329 557 0.76 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_29 - 209 CbiA PF01656.18 195 2.6e-22 72.2 0.0 1 1 9.5e-24 5e-22 71.2 0.0 1 154 3 137 3 178 0.78 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_5 - 584 KaiC PF06745.8 227 0.00027 13.0 0.3 1 2 0.00063 0.066 5.2 0.0 24 60 13 48 8 114 0.77 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 KaiC PF06745.8 227 0.00027 13.0 0.3 2 2 0.00069 0.073 5.1 0.2 21 57 329 364 322 493 0.71 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_14 - 260 AAA_14 PF13173.1 128 7.1e-07 22.2 0.0 1 1 1.2e-08 1.3e-06 21.4 0.0 2 96 102 203 101 221 0.67 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_11 - 576 AAA_29 PF13555.1 62 8.1e-08 24.8 0.0 1 1 6.1e-09 1.6e-07 23.8 0.0 23 55 25 56 4 60 0.73 # 7227 # 8954 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.494 1_54 - 396 AAA_29 PF13555.1 62 1.6e-06 20.6 0.0 1 1 1.5e-07 4e-06 19.3 0.0 23 43 166 185 158 193 0.86 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_5 - 584 AAA_29 PF13555.1 62 4e-05 16.1 0.8 1 2 0.012 0.32 3.6 0.0 26 40 11 25 5 33 0.83 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_29 PF13555.1 62 4e-05 16.1 0.8 2 2 0.0001 0.0028 10.2 0.1 23 45 328 349 320 359 0.82 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_14 - 260 AAA_29 PF13555.1 62 0.00081 12.0 0.0 1 1 5.8e-05 0.0015 11.1 0.0 19 59 98 139 89 141 0.72 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_14 - 260 AAA PF00004.24 132 1.6e-07 24.6 0.0 1 1 5.2e-09 2.8e-07 23.8 0.0 1 74 105 180 105 214 0.77 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_5 - 584 AAA PF00004.24 132 7.2e-06 19.2 1.2 1 2 0.006 0.32 4.2 0.0 2 22 12 32 11 88 0.76 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA PF00004.24 132 7.2e-06 19.2 1.2 2 2 9.4e-06 0.0005 13.3 0.5 1 23 330 352 330 517 0.84 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_14 - 260 Bac_DnaA PF00308.13 219 1.3e-09 30.9 0.0 1 1 1.9e-11 2e-09 30.4 0.0 36 136 104 202 75 207 0.85 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_14 - 260 Sigma54_activat PF00158.21 168 8.4e-05 15.1 0.1 1 1 4.8e-06 0.00051 12.5 0.1 18 68 98 148 82 199 0.69 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 1_43 - 1016 MMR_HSR1 PF01926.18 116 0.00055 12.9 0.0 1 1 1.3e-05 0.0014 11.6 0.0 3 27 497 518 495 535 0.83 # 31236 # 34283 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_68 - 722 N6_Mtase PF02384.11 311 2.1e-54 177.6 0.0 1 1 2.8e-56 3e-54 177.1 0.0 3 276 177 489 175 508 0.84 # 55579 # 57744 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_14 - 260 DUF258 PF03193.11 161 9.9e-06 17.8 0.0 1 1 2.9e-07 1.5e-05 17.2 0.0 22 80 89 159 70 194 0.71 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_5 - 584 DUF258 PF03193.11 161 5.3e-05 15.4 0.0 1 2 0.0036 0.19 3.9 0.0 37 52 10 25 2 123 0.89 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 DUF258 PF03193.11 161 5.3e-05 15.4 0.0 2 2 8.8e-05 0.0047 9.1 0.0 35 59 327 351 308 396 0.80 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_31 PF13614.1 157 1.7e-12 40.5 0.2 1 2 3e-08 1.6e-06 21.1 0.0 4 127 11 145 9 155 0.74 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_31 PF13614.1 157 1.7e-12 40.5 0.2 2 2 7.1e-06 0.00037 13.4 0.0 3 43 330 369 328 413 0.73 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_29 - 209 AAA_31 PF13614.1 157 4.5e-06 19.7 0.0 1 1 5e-07 2.7e-05 17.1 0.0 2 42 2 42 1 55 0.88 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_5 - 584 NTPase_1 PF03266.10 168 1.2e-05 18.0 1.6 1 2 0.0032 0.17 4.6 0.1 2 29 11 38 10 52 0.82 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 NTPase_1 PF03266.10 168 1.2e-05 18.0 1.6 2 2 4.4e-05 0.0023 10.6 0.1 2 30 330 358 329 362 0.92 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_14 - 260 NTPase_1 PF03266.10 168 0.00016 14.4 0.2 1 2 0.0032 0.17 4.5 0.1 2 30 105 133 104 153 0.83 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_14 - 260 NTPase_1 PF03266.10 168 0.00016 14.4 0.2 2 2 0.00032 0.017 7.8 0.0 88 112 157 181 144 203 0.73 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_5 - 584 AAA_33 PF13671.1 143 0.00053 12.9 0.7 1 2 0.073 7.7 -0.6 0.0 3 31 12 45 11 88 0.71 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_33 PF13671.1 143 0.00053 12.9 0.7 2 2 3e-05 0.0032 10.3 0.3 1 41 329 377 329 473 0.68 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 KTI12 PF08433.5 270 0.00046 12.4 0.1 1 2 0.034 3.6 -0.4 0.0 5 38 12 45 10 56 0.89 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 KTI12 PF08433.5 270 0.00046 12.4 0.1 2 2 2.7e-05 0.0028 9.8 0.0 3 38 329 364 328 386 0.88 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_68 - 722 Methyltransf_26 PF13659.1 117 9.3e-11 34.8 0.0 1 1 2e-12 2.1e-10 33.7 0.0 5 86 232 327 229 390 0.77 # 55579 # 57744 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_5 - 584 AAA_30 PF13604.1 196 2.3e-06 20.3 0.7 1 2 0.0054 0.57 2.7 0.0 22 54 12 44 3 83 0.86 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_30 PF13604.1 196 2.3e-06 20.3 0.7 2 2 9.1e-07 9.7e-05 15.0 0.1 10 54 319 363 316 381 0.89 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_54 - 396 FtsK_SpoIIIE PF01580.13 205 3.4e-05 16.3 0.0 1 1 2e-06 7.1e-05 15.3 0.0 41 66 168 192 145 197 0.83 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_5 - 584 FtsK_SpoIIIE PF01580.13 205 0.00035 13.0 0.0 1 1 2.3e-05 0.00081 11.9 0.0 23 88 310 375 296 468 0.85 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_43 - 1016 FtsK_SpoIIIE PF01580.13 205 0.001 11.6 0.0 1 1 5.4e-05 0.0019 10.6 0.0 18 59 474 514 456 530 0.67 # 31236 # 34283 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 2_11 - 576 DUF2813 PF11398.3 373 8.7e-06 17.9 0.0 1 1 1.6e-07 1.7e-05 17.0 0.0 3 65 4 66 2 100 0.87 # 7227 # 8954 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.494 2_5 - 584 ABC_tran PF00005.22 137 1.4e-05 18.4 0.0 1 2 0.018 0.47 3.7 0.0 14 111 11 111 8 119 0.77 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 ABC_tran PF00005.22 137 1.4e-05 18.4 0.0 2 2 9.2e-05 0.0024 11.2 0.0 13 49 329 365 321 459 0.77 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_54 - 396 ABC_tran PF00005.22 137 3.2e-05 17.2 0.0 1 1 2.4e-06 6.4e-05 16.3 0.0 16 34 170 188 162 221 0.87 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 260 ABC_tran PF00005.22 137 0.00013 15.3 0.3 1 1 5.3e-05 0.0014 11.9 0.0 8 30 99 121 93 130 0.86 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 1_43 - 1016 ABC_tran PF00005.22 137 0.00062 13.1 0.0 1 1 8.1e-05 0.0022 11.3 0.0 13 33 495 515 487 525 0.85 # 31236 # 34283 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_68 - 722 Cons_hypoth95 PF03602.10 183 0.0003 13.2 0.0 1 2 1.2e-05 0.0013 11.1 0.0 72 152 268 347 263 360 0.82 # 55579 # 57744 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_68 - 722 Cons_hypoth95 PF03602.10 183 0.0003 13.2 0.0 2 2 0.096 10 -1.6 0.0 132 158 595 621 587 629 0.81 # 55579 # 57744 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_68 - 722 Eco57I PF07669.6 106 2.7e-05 17.5 0.0 1 1 5e-06 0.00053 13.4 0.0 2 103 311 441 310 444 0.77 # 55579 # 57744 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_5 - 584 RuvB_N PF05496.7 234 1.6e-07 23.6 0.1 1 2 0.033 1.7 0.5 0.0 52 72 10 30 5 49 0.76 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 RuvB_N PF05496.7 234 1.6e-07 23.6 0.1 2 2 3.8e-08 2e-06 20.0 0.0 49 119 326 400 300 407 0.79 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_14 - 260 RuvB_N PF05496.7 234 0.00027 13.0 0.0 1 1 1.1e-05 0.00057 11.9 0.0 50 119 102 182 89 190 0.68 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_5 - 584 AAA_19 PF13245.1 76 2.9e-09 29.6 1.7 1 2 1.8e-05 0.00038 13.2 0.0 12 50 11 44 4 50 0.87 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_19 PF13245.1 76 2.9e-09 29.6 1.7 2 2 1.7e-05 0.00037 13.3 0.1 4 45 320 358 318 378 0.79 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_12 - 329 AAA_19 PF13245.1 76 6.4e-06 18.9 0.3 1 1 5e-06 0.00011 15.0 0.3 11 62 11 55 3 74 0.76 # 8951 # 9937 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.490 2_14 - 260 AAA_19 PF13245.1 76 0.00043 13.0 0.0 1 1 5e-05 0.0011 11.8 0.0 10 37 103 129 96 154 0.79 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_29 - 209 AAA_19 PF13245.1 76 0.0006 12.6 0.1 1 1 0.00048 0.01 8.6 0.0 20 48 11 35 9 44 0.84 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_54 - 396 AAA_19 PF13245.1 76 0.00063 12.5 0.3 1 1 8.5e-05 0.0018 11.1 0.3 10 37 165 192 156 260 0.79 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_13 - 327 Methyltransf_2 PF00891.13 242 0.00011 14.4 0.0 1 1 2.2e-06 0.00023 13.4 0.0 69 112 241 284 222 297 0.86 # 7958 # 8938 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.499 1_43 - 1016 AAA_10 PF12846.2 304 1.2e-35 116.3 0.0 1 1 9.9e-37 1.8e-35 115.8 0.0 5 301 497 894 493 897 0.93 # 31236 # 34283 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_36 - 731 AAA_10 PF12846.2 304 6.5e-11 35.1 0.6 1 1 1.2e-11 2.1e-10 33.4 0.6 60 294 217 508 136 518 0.67 # 21760 # 23952 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 2_14 - 260 AAA_10 PF12846.2 304 6.2e-06 18.8 0.6 1 1 7.5e-06 0.00013 14.4 0.0 1 33 102 134 102 141 0.92 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_5 - 584 AAA_10 PF12846.2 304 9.5e-06 18.2 0.7 1 2 0.00072 0.013 7.9 0.0 3 56 10 65 8 99 0.80 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_10 PF12846.2 304 9.5e-06 18.2 0.7 2 2 0.00069 0.012 7.9 0.1 3 44 329 372 327 420 0.80 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_54 - 396 AAA_10 PF12846.2 304 4.9e-05 15.8 0.0 1 1 6.6e-06 0.00012 14.6 0.0 3 28 167 192 165 207 0.86 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_29 - 209 AAA_10 PF12846.2 304 0.00017 14.1 0.0 1 1 1.5e-05 0.00027 13.4 0.0 11 39 11 39 3 67 0.90 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_9 - 190 NodS PF05401.6 201 0.0008 11.8 0.0 1 2 0.054 5.8 -0.8 0.0 42 154 33 58 19 66 0.62 # 5964 # 6533 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 2_9 - 190 NodS PF05401.6 201 0.0008 11.8 0.0 2 2 2.7e-05 0.0028 10.0 0.0 26 70 99 143 85 171 0.83 # 5964 # 6533 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675 2_5 - 584 adh_short_C2 PF13561.1 241 0.0003 13.6 0.0 1 2 0.00089 0.094 5.4 0.0 1 32 18 61 17 131 0.64 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 adh_short_C2 PF13561.1 241 0.0003 13.6 0.0 2 2 0.00055 0.058 6.1 0.0 5 45 340 381 336 463 0.73 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_14 - 260 ResIII PF04851.10 184 0.00042 13.1 0.0 1 2 0.00013 0.0045 9.8 0.0 7 51 88 128 72 140 0.77 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_14 - 260 ResIII PF04851.10 184 0.00042 13.1 0.0 2 2 0.051 1.8 1.3 0.0 113 163 132 181 128 204 0.67 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_12 - 329 ResIII PF04851.10 184 0.00052 12.8 0.0 1 1 2.7e-05 0.00094 12.0 0.0 26 70 10 55 4 72 0.78 # 8951 # 9937 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.490 2_5 - 584 ResIII PF04851.10 184 0.00077 12.3 0.0 1 2 0.0044 0.15 4.8 0.0 32 56 15 42 4 69 0.83 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 ResIII PF04851.10 184 0.00077 12.3 0.0 2 2 0.0042 0.15 4.9 0.0 23 50 325 352 255 361 0.76 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_12 - 329 Viral_helicase1 PF01443.13 234 7.5e-11 34.9 0.0 1 2 7.6e-06 0.0008 11.9 0.0 5 39 16 55 12 78 0.65 # 8951 # 9937 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.490 2_12 - 329 Viral_helicase1 PF01443.13 234 7.5e-11 34.9 0.0 2 2 1.4e-08 1.5e-06 20.8 0.0 62 123 121 179 112 196 0.85 # 8951 # 9937 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.490 1_43 - 1016 DUF2075 PF09848.4 352 0.0013 10.7 0.0 1 1 2.1e-05 0.0022 9.9 0.0 3 32 495 524 493 558 0.74 # 31236 # 34283 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_21 - 287 Methyltransf_27 PF13708.1 194 2.2e-69 225.8 0.0 1 1 2.7e-71 2.9e-69 225.5 0.0 2 194 89 282 88 282 0.98 # 12370 # 13230 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_36 - 731 TrwB_AAD_bind PF10412.4 386 4.9e-11 34.8 1.1 1 3 3.2e-05 0.0034 9.0 0.0 11 37 132 158 126 175 0.81 # 21760 # 23952 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_36 - 731 TrwB_AAD_bind PF10412.4 386 4.9e-11 34.8 1.1 2 3 0.0012 0.12 3.8 0.2 90 170 235 307 219 323 0.67 # 21760 # 23952 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_36 - 731 TrwB_AAD_bind PF10412.4 386 4.9e-11 34.8 1.1 3 3 2.8e-08 3e-06 19.0 0.0 259 338 452 532 425 571 0.73 # 21760 # 23952 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 2_5 - 584 ArgK PF03308.11 267 2.4e-07 22.7 0.3 1 2 1e-05 0.0011 10.7 0.1 34 71 13 50 9 54 0.93 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 ArgK PF03308.11 267 2.4e-07 22.7 0.3 2 2 2.5e-05 0.0027 9.5 0.0 32 71 330 369 305 389 0.86 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 PIF1 PF05970.9 364 3.1e-05 16.0 0.1 1 2 0.00051 0.054 5.3 0.0 20 56 6 42 2 49 0.83 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 PIF1 PF05970.9 364 3.1e-05 16.0 0.1 2 2 0.0001 0.011 7.6 0.0 13 58 318 363 308 379 0.85 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 Gtr1_RagA PF04670.7 232 0.00042 12.5 0.4 1 2 0.018 1.9 0.5 0.1 2 16 11 25 10 27 0.87 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 Gtr1_RagA PF04670.7 232 0.00042 12.5 0.4 2 2 5.5e-05 0.0058 8.7 0.1 2 19 330 347 329 376 0.89 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 RNA_helicase PF00910.17 107 0.00036 13.7 0.2 1 2 0.037 2 1.7 0.0 2 18 12 28 11 50 0.80 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 RNA_helicase PF00910.17 107 0.00036 13.7 0.2 2 2 0.00017 0.0091 9.2 0.0 1 25 330 354 330 378 0.86 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_43 - 1016 RNA_helicase PF00910.17 107 0.00075 12.7 0.0 1 1 6.6e-05 0.0035 10.6 0.0 2 25 497 520 497 537 0.85 # 31236 # 34283 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_7 - 189 Terminase_GpA PF05876.7 557 0.0002 12.7 0.3 1 2 0.069 7.3 -2.3 0.3 230 243 50 63 31 83 0.65 # 4920 # 5486 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.545 1_7 - 189 Terminase_GpA PF05876.7 557 0.0002 12.7 0.3 2 2 1.9e-06 0.0002 12.7 0.3 165 241 107 174 99 180 0.87 # 4920 # 5486 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.545 2_14 - 260 AAA_24 PF13479.1 213 0.001 11.6 0.0 1 1 7e-05 0.0037 9.8 0.0 3 21 102 120 100 127 0.84 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_5 - 584 AAA_24 PF13479.1 213 0.0021 10.6 3.2 1 2 0.0062 0.33 3.5 0.2 10 50 15 65 10 146 0.62 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_24 PF13479.1 213 0.0021 10.6 3.2 2 2 0.00073 0.039 6.5 0.3 6 22 330 346 327 352 0.87 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_12 - 329 UvrD-helicase PF00580.16 315 3.6e-13 42.4 0.0 1 2 1.9e-05 0.0021 10.4 0.1 14 67 10 57 3 78 0.76 # 8951 # 9937 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.490 2_12 - 329 UvrD-helicase PF00580.16 315 3.6e-13 42.4 0.0 2 2 2.6e-11 2.7e-09 29.7 0.0 246 304 111 168 97 178 0.87 # 8951 # 9937 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.490 1_61 - 178 TIGR00922 TIGR00922 172 5e-06 19.1 0.0 1 1 8.7e-08 9.3e-06 18.3 0.0 34 96 28 92 4 106 0.75 # 48025 # 48558 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.472 1_43 - 1016 NACHT PF05729.7 166 8.3e-05 15.3 0.0 1 2 8.5e-05 0.003 10.2 0.0 3 38 496 527 494 562 0.79 # 31236 # 34283 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 1_43 - 1016 NACHT PF05729.7 166 8.3e-05 15.3 0.0 2 2 0.026 0.93 2.1 0.0 33 62 830 860 815 878 0.83 # 31236 # 34283 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.552 2_5 - 584 NACHT PF05729.7 166 0.00014 14.5 2.8 1 2 0.043 1.5 1.4 0.1 2 19 10 27 9 40 0.79 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 NACHT PF05729.7 166 0.00014 14.5 2.8 2 2 2.3e-05 0.0008 12.1 0.5 2 28 329 355 328 460 0.91 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_54 - 396 NACHT PF05729.7 166 0.00021 14.0 0.0 1 1 1.6e-05 0.00055 12.6 0.0 4 30 169 195 167 200 0.87 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_5 - 584 AAA_25 PF13481.1 194 1.3e-10 34.0 3.2 1 2 8.7e-05 0.0023 10.3 0.3 37 79 12 44 8 126 0.86 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_25 PF13481.1 194 1.3e-10 34.0 3.2 2 2 8.7e-09 2.3e-07 23.4 0.2 23 151 316 449 295 496 0.63 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 1_54 - 396 AAA_25 PF13481.1 194 7.1e-06 18.5 0.0 1 1 4.4e-07 1.2e-05 17.8 0.0 24 58 156 190 128 267 0.85 # 43812 # 44999 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_14 - 260 AAA_25 PF13481.1 194 4.2e-05 16.0 0.0 1 1 2.5e-06 6.6e-05 15.3 0.0 28 58 97 127 71 173 0.81 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_29 - 209 AAA_25 PF13481.1 194 0.00014 14.3 0.1 1 1 1.2e-05 0.00033 13.1 0.0 42 87 10 44 3 90 0.78 # 24154 # 24780 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_14 - 260 AAA_28 PF13521.1 163 0.0018 11.2 1.4 1 2 0.071 7.6 -0.6 0.1 85 110 36 63 5 83 0.69 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_14 - 260 AAA_28 PF13521.1 163 0.0018 11.2 1.4 2 2 5e-05 0.0053 9.7 0.1 1 27 104 134 104 169 0.71 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_14 - 260 AAA_5 PF07728.9 139 3.9e-05 16.4 0.2 1 1 7.8e-06 0.00041 13.1 0.1 1 74 104 173 104 181 0.73 # 11006 # 11785 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.558 2_5 - 584 AAA_5 PF07728.9 139 0.00023 13.9 0.1 1 2 0.028 1.5 1.6 0.0 2 31 11 43 10 66 0.76 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 AAA_5 PF07728.9 139 0.00023 13.9 0.1 2 2 0.00011 0.0056 9.4 0.0 2 46 330 374 329 431 0.78 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 APS_kinase PF01583.15 157 6.4e-07 22.1 0.2 1 2 1.9e-05 0.002 10.8 0.0 4 37 10 43 7 52 0.89 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_5 - 584 APS_kinase PF01583.15 157 6.4e-07 22.1 0.2 2 2 7.3e-05 0.0077 8.9 0.1 5 37 330 362 327 387 0.85 # 2861 # 4612 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/570f3953-95b0-42ad-b24f-013fd6328680 # Target file: checkm_output/bins/pm1083/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1083/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/570f3953-95b0-42ad-b24f-013fd6328680 checkm_output/bins/pm1083/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:53:11 2020 # [ok]