# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_37 - 325 Mg_chelatase PF01078.16 207 5.3e-09 27.6 0.0 1 2 0.00013 0.007 7.6 0.0 25 45 32 52 27 60 0.89 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_37 - 325 Mg_chelatase PF01078.16 207 5.3e-09 27.6 0.0 2 2 1e-07 5.7e-06 17.7 0.0 92 157 86 149 79 158 0.89 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_39 - 338 Eno-Rase_NADH_b PF12242.3 78 3.8e-06 18.8 0.1 1 1 1.3e-07 7.3e-06 17.9 0.1 33 66 52 83 45 93 0.80 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_24 - 258 Methyltransf_12 PF08242.7 99 3.1e-06 19.8 0.0 1 1 1.2e-07 6.5e-06 18.7 0.0 1 82 111 188 111 199 0.85 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_21 - 492 cobW PF02492.14 178 0.00015 13.3 1.3 1 2 0.0051 0.29 2.6 0.0 3 19 33 49 31 59 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 cobW PF02492.14 178 0.00015 13.3 1.3 2 2 6.1e-05 0.0034 8.9 0.3 3 28 325 349 323 352 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_39 - 338 DUF1776 PF08643.5 299 7e-05 14.1 0.0 1 1 1.9e-06 0.00011 13.5 0.0 107 195 152 234 146 239 0.84 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_3 - 402 MipZ PF09140.6 261 1.1e-06 20.0 0.0 1 2 0.0027 0.15 3.1 0.0 3 50 111 163 109 193 0.73 # 1704 # 2909 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_3 - 402 MipZ PF09140.6 261 1.1e-06 20.0 0.0 2 2 8.7e-07 4.9e-05 14.6 0.0 87 136 233 282 220 296 0.87 # 1704 # 2909 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_37 - 325 AAA_2 PF07724.9 171 2.9e-06 19.4 0.0 1 1 1.2e-07 6.9e-06 18.1 0.0 6 131 32 152 30 181 0.85 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_21 - 492 DUF87 PF01935.12 229 0.0077 8.1 11.6 1 4 0.0013 0.072 4.9 0.0 25 48 32 55 20 62 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF87 PF01935.12 229 0.0077 8.1 11.6 2 4 0.063 3.5 -0.6 1.7 115 174 205 266 179 295 0.51 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF87 PF01935.12 229 0.0077 8.1 11.6 3 4 0.00099 0.055 5.3 0.3 25 46 324 345 321 357 0.88 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF87 PF01935.12 229 0.0077 8.1 11.6 4 4 0.0088 0.49 2.2 0.1 40 196 415 472 368 486 0.56 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_22 PF13401.1 131 9.8e-09 27.6 0.8 1 2 0.0025 0.14 4.4 0.0 9 25 35 51 30 144 0.78 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_22 PF13401.1 131 9.8e-09 27.6 0.8 2 2 2e-08 1.1e-06 20.9 0.0 7 125 325 464 322 471 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_48 - 296 ChlI PF13541.1 121 4.8e-07 21.4 0.1 1 1 2e-08 1.1e-06 20.3 0.0 62 120 202 260 168 261 0.89 # 43615 # 44502 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.462 1_21 - 492 PRK PF00485.13 194 0.00016 13.3 0.2 1 2 0.0023 0.13 3.8 0.0 2 21 33 52 32 85 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 PRK PF00485.13 194 0.00016 13.3 0.2 2 2 0.00027 0.015 6.9 0.0 2 33 325 364 325 409 0.75 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 KAP_NTPase PF07693.9 325 0.00012 13.2 1.8 1 2 0.00056 0.031 5.3 0.0 23 47 33 57 26 143 0.77 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 KAP_NTPase PF07693.9 325 0.00012 13.2 1.8 2 2 0.00018 0.01 6.9 0.0 23 42 325 344 319 398 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_15 PF13175.1 415 2.1e-10 32.2 1.2 1 3 6e-05 0.0034 8.5 0.0 26 54 34 58 5 119 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_15 PF13175.1 415 2.1e-10 32.2 1.2 2 3 6.4e-06 0.00036 11.7 0.0 26 90 326 383 300 417 0.60 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_15 PF13175.1 415 2.1e-10 32.2 1.2 3 3 3.8e-05 0.0022 9.1 0.1 352 414 415 467 393 476 0.75 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_17 PF13207.1 121 5e-07 22.7 3.7 1 2 0.0023 0.13 5.2 0.4 1 20 32 51 32 195 0.85 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_17 PF13207.1 121 5e-07 22.7 3.7 2 2 3e-07 1.7e-05 17.8 0.1 1 52 324 379 324 486 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_21 PF13304.1 303 1.1e-18 60.3 5.1 1 4 3.9e-07 2.2e-05 16.6 0.6 3 21 34 52 33 85 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_21 PF13304.1 303 1.1e-18 60.3 5.1 2 4 0.00027 0.015 7.2 0.0 237 303 100 160 91 160 0.84 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_21 PF13304.1 303 1.1e-18 60.3 5.1 3 4 4.9e-07 2.8e-05 16.2 0.0 3 43 326 361 325 384 0.76 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_21 PF13304.1 303 1.1e-18 60.3 5.1 4 4 6.8e-08 3.8e-06 19.1 0.0 233 301 405 467 386 469 0.89 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Miro PF08477.8 119 2.1e-09 30.0 1.0 1 2 5.7e-06 0.00032 13.3 0.0 1 21 32 52 32 82 0.89 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Miro PF08477.8 119 2.1e-09 30.0 1.0 2 2 3.4e-06 0.00019 14.0 0.0 1 25 324 348 324 392 0.72 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 MobB PF03205.9 140 2.8e-05 16.0 0.4 1 2 0.0015 0.086 4.7 0.0 2 20 32 50 31 61 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 MobB PF03205.9 140 2.8e-05 16.0 0.4 2 2 7.6e-05 0.0042 8.9 0.1 3 23 325 345 323 353 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Zeta_toxin PF06414.7 201 2.9e-05 15.3 1.5 1 2 0.00024 0.014 6.6 0.0 21 40 35 54 30 63 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Zeta_toxin PF06414.7 201 2.9e-05 15.3 1.5 2 2 0.00017 0.0098 7.0 0.0 20 40 326 346 309 353 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 SMC_N PF02463.14 220 1.2e-10 33.0 6.8 1 4 0.00018 0.01 7.1 0.0 29 43 35 49 25 65 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 SMC_N PF02463.14 220 1.2e-10 33.0 6.8 2 4 0.00018 0.0099 7.2 0.0 116 203 79 160 70 173 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 SMC_N PF02463.14 220 1.2e-10 33.0 6.8 3 4 0.00011 0.0062 7.8 0.1 27 44 325 342 311 344 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 SMC_N PF02463.14 220 1.2e-10 33.0 6.8 4 4 7.9e-06 0.00044 11.6 0.2 117 211 382 478 359 485 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Arch_ATPase PF01637.13 234 5.8e-05 14.9 3.0 1 3 0.02 1.1 0.9 0.0 25 40 35 50 24 85 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Arch_ATPase PF01637.13 234 5.8e-05 14.9 3.0 2 3 0.0083 0.46 2.1 0.7 53 104 181 237 166 267 0.65 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Arch_ATPase PF01637.13 234 5.8e-05 14.9 3.0 3 3 3.2e-05 0.0018 10.0 0.0 24 68 326 374 323 473 0.69 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_16 PF13191.1 185 5.4e-06 18.6 0.1 1 2 0.00079 0.022 6.8 0.0 29 44 35 50 22 151 0.89 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_16 PF13191.1 185 5.4e-06 18.6 0.1 2 2 0.00014 0.004 9.2 0.0 27 49 325 347 320 410 0.84 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_37 - 325 AAA_16 PF13191.1 185 0.00015 13.9 0.1 1 1 1.4e-05 0.0004 12.5 0.0 18 64 21 69 10 126 0.78 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_21 - 492 AAA_23 PF13476.1 202 2.8e-08 26.4 8.6 1 3 3.8e-05 0.0021 10.4 0.0 24 38 35 49 25 57 0.91 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_23 PF13476.1 202 2.8e-08 26.4 8.6 2 3 0.0033 0.18 4.1 1.4 141 177 187 244 105 280 0.58 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_23 PF13476.1 202 2.8e-08 26.4 8.6 3 3 1.9e-06 0.00011 14.7 0.4 22 39 325 342 288 343 0.76 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_18 PF13238.1 129 0.00055 12.4 8.3 1 2 0.0015 0.086 5.3 0.0 1 21 33 53 33 89 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_18 PF13238.1 129 0.00055 12.4 8.3 2 2 3.5e-05 0.0019 10.6 0.6 1 23 325 354 325 475 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_39 - 338 adh_short PF00106.20 167 1.2e-34 111.7 0.1 1 1 2.7e-36 1.5e-34 111.4 0.1 3 166 60 225 58 226 0.97 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_36 - 223 AAA_13 PF13166.1 712 0.0015 9.1 20.8 1 2 8.6e-07 4.8e-05 14.0 12.3 333 457 6 132 3 140 0.91 # 33255 # 33923 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.501 1_36 - 223 AAA_13 PF13166.1 712 0.0015 9.1 20.8 2 2 0.012 0.67 0.3 1.2 366 397 169 201 149 222 0.35 # 33255 # 33923 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.501 1_3 - 402 CbiA PF01656.18 195 8.5e-19 59.8 0.0 1 1 2.8e-20 1.6e-18 58.9 0.0 1 142 111 292 111 327 0.76 # 1704 # 2909 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_21 - 492 AAA_29 PF13555.1 62 2.4e-08 25.5 0.5 1 2 9.5e-06 0.00053 11.6 0.0 25 40 32 47 20 52 0.78 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_29 PF13555.1 62 2.4e-08 25.5 0.5 2 2 1.1e-05 0.00061 11.4 0.1 14 40 314 339 310 343 0.77 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_37 - 325 AAA PF00004.24 132 8.7e-06 18.1 0.0 1 1 6.8e-07 1.9e-05 17.0 0.0 1 125 32 167 32 171 0.73 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_21 - 492 AAA PF00004.24 132 2.3e-05 16.7 0.1 1 2 0.011 0.32 3.3 0.0 3 22 35 54 33 124 0.77 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA PF00004.24 132 2.3e-05 16.7 0.1 2 2 6.4e-05 0.0018 10.6 0.0 3 23 327 347 325 437 0.75 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_39 - 338 KR PF08659.5 181 7.1e-14 43.9 0.0 1 1 1.8e-15 9.8e-14 43.5 0.0 3 174 60 236 59 242 0.81 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_37 - 325 Sigma54_activat PF00158.21 168 1.4e-64 208.7 0.0 1 1 3.6e-66 2e-64 208.2 0.0 2 163 9 170 8 175 0.98 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_21 - 492 MMR_HSR1 PF01926.18 116 1e-06 20.8 4.1 1 2 2.2e-05 0.0012 10.9 0.1 1 27 32 92 32 178 0.52 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 MMR_HSR1 PF01926.18 116 1e-06 20.8 4.1 2 2 4.9e-05 0.0027 9.8 0.7 1 99 324 473 324 488 0.56 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF258 PF03193.11 161 4.4e-09 27.8 0.1 1 2 2e-07 1.1e-05 16.7 0.0 39 95 34 126 15 136 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF258 PF03193.11 161 4.4e-09 27.8 0.1 2 2 6.4e-05 0.0036 8.6 0.0 38 67 325 352 302 391 0.77 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_3 - 402 AAA_31 PF13614.1 157 5.3e-05 15.3 0.0 1 1 5.5e-06 0.00031 12.8 0.0 108 147 235 273 230 279 0.86 # 1704 # 2909 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_21 - 492 NTPase_1 PF03266.10 168 4.7e-05 15.2 2.1 1 2 0.044 2.4 -0.1 0.0 1 19 32 50 32 62 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 NTPase_1 PF03266.10 168 4.7e-05 15.2 2.1 2 2 1.7e-05 0.00096 11.0 1.0 1 26 324 349 324 490 0.62 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_33 PF13671.1 143 0.00037 12.5 0.1 1 2 0.0085 0.48 2.4 0.0 4 19 35 50 33 121 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_33 PF13671.1 143 0.00037 12.5 0.1 2 2 0.00025 0.014 7.3 0.0 3 33 326 356 325 398 0.77 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_24 - 258 FmrO PF07091.6 251 2.3e-85 277.6 0.0 1 1 4.7e-87 2.6e-85 277.4 0.0 1 251 12 251 12 251 0.99 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_21 - 492 AAA_30 PF13604.1 196 1.8e-05 16.5 1.7 1 2 0.0022 0.12 4.0 0.0 18 39 31 51 25 61 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_30 PF13604.1 196 1.8e-05 16.5 1.7 2 2 2.4e-05 0.0013 10.4 0.0 21 133 325 467 321 469 0.59 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_24 - 258 TehB PF03848.9 192 0.00043 11.5 2.3 1 1 3.7e-06 0.00021 12.6 0.2 32 112 108 190 66 207 0.86 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_24 - 258 MTS PF05175.9 170 2.1e-06 19.3 0.0 1 1 7.2e-08 4e-06 18.4 0.0 33 103 108 177 99 195 0.88 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_48 - 296 Lon_C PF05362.8 205 7.6e-18 56.6 0.0 1 1 2e-19 1.1e-17 56.1 0.0 44 200 133 290 97 294 0.87 # 43615 # 44502 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.462 1_21 - 492 Dynamin_N PF00350.18 168 0.0059 8.5 17.3 1 2 0.0077 0.43 2.4 11.6 1 86 33 234 33 305 0.68 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Dynamin_N PF00350.18 168 0.0059 8.5 17.3 2 2 0.00049 0.027 6.3 0.3 1 111 325 437 325 487 0.51 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 ABC_tran PF00005.22 137 1.9e-31 101.3 8.0 1 4 5.6e-10 3.2e-08 26.1 0.1 5 37 24 56 20 66 0.85 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 ABC_tran PF00005.22 137 1.9e-31 101.3 8.0 2 4 1e-07 5.8e-06 18.7 0.0 101 137 94 128 73 128 0.79 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 ABC_tran PF00005.22 137 1.9e-31 101.3 8.0 3 4 0.041 2.3 0.6 0.5 51 102 203 255 163 276 0.46 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 ABC_tran PF00005.22 137 1.9e-31 101.3 8.0 4 4 3.2e-19 1.8e-17 56.0 0.1 2 136 313 436 312 437 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 ATP-synt_ab PF00006.20 215 1.2e-05 17.0 0.1 1 2 0.044 2.5 -0.4 0.0 17 34 32 49 28 55 0.88 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 ATP-synt_ab PF00006.20 215 1.2e-05 17.0 0.1 2 2 1.5e-06 8.4e-05 14.2 0.1 7 66 314 380 307 402 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_19 PF13245.1 76 9.3e-05 14.3 0.1 1 1 7.3e-06 0.00041 12.2 0.0 10 48 323 360 317 370 0.75 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_10 PF12846.2 304 2.4e-05 15.9 4.7 1 2 0.00068 0.038 5.4 0.0 6 22 35 51 33 67 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_10 PF12846.2 304 2.4e-05 15.9 4.7 2 2 1.7e-05 0.00095 10.7 0.5 4 118 325 478 322 489 0.76 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_39 - 338 adh_short_C2 PF13561.1 241 2.9e-30 97.8 0.0 1 1 6e-32 3.4e-30 97.6 0.0 5 239 66 298 63 300 0.96 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_24 - 258 Methyltransf_31 PF13847.1 152 0.00018 13.2 0.2 1 2 0.093 5.2 -1.3 0.0 95 98 39 42 7 89 0.58 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_24 - 258 Methyltransf_31 PF13847.1 152 0.00018 13.2 0.2 2 2 8.4e-06 0.00047 11.9 0.0 5 83 108 182 104 231 0.78 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_21 - 492 DUF3584 PF12128.3 1201 0.004 6.5 13.2 1 3 0.002 0.11 1.7 0.0 13 36 26 49 22 50 0.84 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF3584 PF12128.3 1201 0.004 6.5 13.2 2 3 0.0047 0.26 0.5 7.1 629 703 191 268 173 301 0.38 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF3584 PF12128.3 1201 0.004 6.5 13.2 3 3 8.7e-05 0.0049 6.2 0.3 19 37 324 342 318 343 0.88 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 PduV-EutP PF10662.4 143 1.4e-06 19.9 1.2 1 3 8e-05 0.0045 8.6 0.0 3 31 32 60 30 100 0.90 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 PduV-EutP PF10662.4 143 1.4e-06 19.9 1.2 2 3 0.00051 0.028 6.0 0.1 3 23 324 344 322 352 0.89 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 PduV-EutP PF10662.4 143 1.4e-06 19.9 1.2 3 3 0.0082 0.46 2.1 0.0 40 72 431 463 420 484 0.69 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_39 - 338 Epimerase PF01370.16 236 1e-06 20.4 0.0 1 1 2.5e-08 1.4e-06 19.9 0.0 1 157 60 224 60 238 0.80 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_21 - 492 DUF815 PF05673.8 250 1.4e-05 16.2 0.2 1 2 0.00013 0.0071 7.3 0.0 58 77 35 54 27 63 0.85 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF815 PF05673.8 250 1.4e-05 16.2 0.2 2 2 0.00031 0.017 6.0 0.0 55 76 324 345 315 351 0.85 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_37 - 325 Sigma54_activ_2 PF14532.1 138 3.4e-25 80.8 0.0 1 1 2.2e-26 1.2e-24 79.0 0.0 1 138 9 179 9 179 0.90 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_24 - 258 Methyltransf_23 PF13489.1 161 4.6e-06 18.5 0.0 1 1 1.2e-07 6.5e-06 18.0 0.0 9 93 93 187 85 237 0.73 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_21 - 492 RNA_helicase PF00910.17 107 0.00037 12.8 0.2 1 2 0.0033 0.18 4.1 0.0 3 22 35 54 33 65 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 RNA_helicase PF00910.17 107 0.00037 12.8 0.2 2 2 0.00092 0.051 5.9 0.0 2 22 326 346 325 380 0.79 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 UPF0079 PF02367.12 123 0.00023 12.9 0.1 1 2 0.0017 0.098 4.4 0.0 18 36 33 51 26 60 0.85 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 UPF0079 PF02367.12 123 0.00023 12.9 0.1 2 2 0.00063 0.035 5.8 0.0 14 39 321 346 312 357 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_24 PF13479.1 213 2.1e-05 16.2 3.2 1 2 0.00068 0.038 5.6 0.0 8 38 35 64 30 111 0.76 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_24 PF13479.1 213 2.1e-05 16.2 3.2 2 2 2.2e-05 0.0012 10.5 0.1 4 23 323 342 321 356 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 181 UvrD-helicase PF00580.16 315 8e-05 14.1 3.8 1 1 1.7e-06 9.3e-05 13.9 3.8 127 229 52 155 10 161 0.72 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_21 - 492 NACHT PF05729.7 166 7.9e-07 20.9 0.1 1 2 0.00046 0.026 6.3 0.0 3 20 33 50 31 63 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 NACHT PF05729.7 166 7.9e-07 20.9 0.1 2 2 7.1e-06 0.0004 12.2 0.0 3 24 325 346 323 394 0.84 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_25 PF13481.1 194 1.1e-05 17.0 0.0 1 3 0.0073 0.41 2.1 0.0 37 54 34 51 30 72 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_25 PF13481.1 194 1.1e-05 17.0 0.0 2 3 1.4e-05 0.00079 10.9 0.0 29 54 318 343 294 423 0.76 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_25 PF13481.1 194 1.1e-05 17.0 0.0 3 3 0.06 3.4 -0.9 0.0 168 188 443 463 425 466 0.89 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 ABC_tran_2 PF12848.2 85 3.5e-14 44.6 16.1 1 1 2e-14 1.1e-12 39.8 16.1 1 85 167 283 167 283 0.93 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_28 PF13521.1 163 2.2e-05 16.6 4.3 1 2 0.023 1.3 1.0 0.0 2 20 33 51 32 66 0.84 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_28 PF13521.1 163 2.2e-05 16.6 4.3 2 2 5.6e-07 3.2e-05 16.0 0.1 1 34 324 359 324 391 0.79 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_37 - 325 AAA_5 PF07728.9 139 1.3e-09 30.0 0.0 1 1 3.8e-11 2.2e-09 29.3 0.0 1 123 31 150 31 169 0.81 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/25726ff5-d644-4040-8847-eb0e4050f567 # Target file: checkm_output/bins/pm1082/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1082/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/25726ff5-d644-4040-8847-eb0e4050f567 checkm_output/bins/pm1082/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:53:06 2020 # [ok]