# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 220 Seryl_tRNA_N PF02403.17 108 0.00016 11.6 9.4 1 2 2.8e-05 0.00034 10.6 2.6 49 100 2 53 1 61 0.90 # 1970 # 2629 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.489 1_3 - 220 Seryl_tRNA_N PF02403.17 108 0.00016 11.6 9.4 2 2 0.00093 0.011 5.7 0.6 45 102 58 114 52 115 0.87 # 1970 # 2629 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.489 1_3 - 220 AAA_13 PF13166.1 712 9.2e-05 10.8 3.8 1 1 9.2e-06 0.00011 10.6 3.8 287 395 6 111 1 124 0.58 # 1970 # 2629 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.489 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/3c1735e4-b71d-4d7f-bc7e-ae686f7bb52a # Target file: checkm_output/bins/pm1061/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1061/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3c1735e4-b71d-4d7f-bc7e-ae686f7bb52a checkm_output/bins/pm1061/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:52:51 2020 # [ok]