# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_69 - 231 OB_NTP_bind PF07717.11 114 0.00063 12.5 0.0 1 1 9.9e-06 0.001 11.9 0.0 24 83 28 97 16 127 0.77 # 54592 # 55284 # -1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_17 - 228 UPF0020 PF01170.13 180 1.2e-05 17.9 0.0 1 2 0.00026 0.026 7.0 0.0 103 123 17 37 4 88 0.71 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_17 - 228 UPF0020 PF01170.13 180 1.2e-05 17.9 0.0 2 2 6.4e-05 0.0065 9.0 0.0 28 54 163 188 158 220 0.67 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_9 - 209 MipZ PF09140.6 261 1.9e-21 69.2 0.5 1 2 1.2e-12 1.2e-10 33.8 0.0 2 53 2 52 1 60 0.89 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_9 - 209 MipZ PF09140.6 261 1.9e-21 69.2 0.5 2 2 1.6e-12 1.6e-10 33.4 0.0 87 140 65 118 58 128 0.92 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_9 - 209 YhjQ PF06564.7 244 2.4e-05 16.7 0.3 1 2 1.8e-06 0.00018 13.8 0.3 4 38 3 37 1 50 0.89 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_9 - 209 YhjQ PF06564.7 244 2.4e-05 16.7 0.3 2 2 0.029 3 0.0 0.0 108 144 69 103 44 113 0.78 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_26 - 176 SSB PF00436.20 104 3.3e-41 132.4 0.3 1 1 4.2e-43 4.3e-41 132.0 0.3 1 101 6 109 6 112 0.96 # 18486 # 19013 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.587 1_74 - 383 DUF87 PF01935.12 229 0.00063 12.5 0.0 1 1 1.1e-05 0.0011 11.7 0.0 28 56 162 191 161 192 0.88 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_74 - 383 AAA_22 PF13401.1 131 1e-05 18.6 0.0 1 1 4.9e-07 2.5e-05 17.4 0.0 4 46 157 196 152 233 0.76 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_92 - 518 AAA_22 PF13401.1 131 0.00029 13.9 0.0 1 1 1.3e-05 0.00066 12.8 0.0 6 28 227 249 222 330 0.78 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_74 - 383 ATP_bind_1 PF03029.12 238 4.8e-05 15.9 0.0 1 1 7.2e-07 7.3e-05 15.3 0.0 1 23 162 184 162 197 0.86 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_17 - 228 Methyltransf_11 PF08241.7 95 0.00064 13.2 0.0 1 2 0.0024 0.25 4.9 0.0 78 93 53 68 48 70 0.84 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_17 - 228 Methyltransf_11 PF08241.7 95 0.00064 13.2 0.0 2 2 0.0014 0.14 5.7 0.0 5 54 172 220 168 226 0.82 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_9 - 209 SRP54 PF00448.17 196 2.5e-07 23.2 0.1 1 1 1.5e-08 1.5e-06 20.7 0.1 4 98 2 91 1 134 0.80 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_17 - 228 N6_N4_Mtase PF01555.13 231 4.6e-37 120.6 0.0 1 1 1.8e-36 1.8e-34 112.1 0.0 1 228 21 200 21 203 0.91 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_9 - 209 AAA_17 PF13207.1 121 1.6e-05 18.7 0.0 1 1 1.2e-06 4.2e-05 17.3 0.0 9 77 11 84 9 205 0.75 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_74 - 383 AAA_17 PF13207.1 121 1.9e-05 18.4 0.1 1 1 7.1e-06 0.00024 14.9 0.0 3 47 161 208 161 251 0.76 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_92 - 518 AAA_17 PF13207.1 121 2.9e-05 17.8 0.1 1 1 3.4e-06 0.00011 15.9 0.0 1 23 227 249 227 342 0.74 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_74 - 383 MobB PF03205.9 140 1.9e-05 17.3 0.0 1 2 0.033 1.7 1.3 0.0 14 60 61 108 61 127 0.88 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_74 - 383 MobB PF03205.9 140 1.9e-05 17.3 0.0 2 2 6.2e-06 0.00032 13.4 0.0 5 26 162 183 160 193 0.90 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_9 - 209 MobB PF03205.9 140 5.8e-05 15.8 0.1 1 1 3.2e-06 0.00016 14.3 0.0 10 42 11 41 1 46 0.79 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_9 - 209 ArsA_ATPase PF02374.10 305 4.4e-08 25.4 0.9 1 3 1.2e-09 1.2e-07 24.0 0.1 3 48 3 48 1 69 0.85 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_9 - 209 ArsA_ATPase PF02374.10 305 4.4e-08 25.4 0.9 2 3 0.053 5.5 -1.2 0.0 121 135 69 85 47 86 0.75 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_9 - 209 ArsA_ATPase PF02374.10 305 4.4e-08 25.4 0.9 3 3 0.075 7.7 -1.7 0.0 205 234 132 161 118 202 0.65 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_92 - 518 T2SE PF00437.15 272 1.1e-41 135.4 0.1 1 1 5.4e-43 2.7e-41 134.1 0.0 10 271 97 373 90 374 0.85 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_74 - 383 T2SE PF00437.15 272 8.2e-36 116.2 0.0 1 1 2.4e-37 1.2e-35 115.6 0.0 120 269 149 306 127 309 0.88 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_92 - 518 G-alpha PF00503.15 389 0.0007 11.2 0.0 1 2 0.069 7.1 -2.0 0.0 234 272 70 113 51 117 0.81 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_92 - 518 G-alpha PF00503.15 389 0.0007 11.2 0.0 2 2 1.9e-05 0.002 9.7 0.0 58 87 225 254 214 312 0.83 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_9 - 209 VirC1 PF07015.6 231 3.4e-09 29.0 0.0 1 1 7.1e-11 7.3e-09 27.9 0.0 3 172 2 164 1 206 0.74 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_9 - 209 Fer4_NifH PF00142.13 273 7.5e-05 14.9 0.2 1 1 2.3e-06 0.00023 13.3 0.0 8 38 9 39 2 46 0.89 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_92 - 518 AAA_16 PF13191.1 185 7.4e-05 15.7 0.0 1 1 4.6e-06 0.00023 14.1 0.0 8 52 213 254 212 330 0.81 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_74 - 383 AAA_16 PF13191.1 185 0.0003 13.7 0.0 1 1 1.2e-05 0.00062 12.7 0.0 27 52 160 188 148 282 0.82 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_92 - 518 AAA_23 PF13476.1 202 0.00018 14.8 0.1 1 1 1.1e-05 0.00056 13.2 0.0 20 38 226 244 209 249 0.86 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_74 - 383 AAA_23 PF13476.1 202 0.00023 14.5 0.0 1 1 7.3e-06 0.00037 13.8 0.0 19 40 157 178 142 209 0.83 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_74 - 383 AAA_18 PF13238.1 129 1.6e-05 18.2 0.0 1 1 6e-07 3.1e-05 17.3 0.0 2 42 161 197 161 230 0.83 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_92 - 518 AAA_18 PF13238.1 129 0.00035 13.8 0.0 1 1 2.2e-05 0.0011 12.2 0.0 1 18 228 245 228 312 0.86 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_9 - 209 CbiA PF01656.18 195 1.8e-22 72.6 0.0 1 1 3.1e-24 3.1e-22 71.8 0.0 1 158 3 141 3 179 0.75 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_92 - 518 AAA_29 PF13555.1 62 2.7e-05 16.6 0.0 1 1 1.1e-06 5.5e-05 15.6 0.0 21 40 224 242 216 254 0.83 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_74 - 383 AAA_29 PF13555.1 62 3.9e-05 16.1 0.0 1 1 2.3e-06 0.00012 14.6 0.0 26 44 160 178 151 186 0.83 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_92 - 518 AAA PF00004.24 132 0.00056 13.1 0.0 1 3 0.057 5.8 0.1 0.0 38 57 81 100 50 113 0.80 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_92 - 518 AAA PF00004.24 132 0.00056 13.1 0.0 2 3 0.00033 0.034 7.3 0.0 1 21 228 248 228 277 0.83 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_92 - 518 AAA PF00004.24 132 0.00056 13.1 0.0 3 3 0.034 3.5 0.8 0.0 9 66 442 508 436 515 0.62 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_43 - 764 TraG-D_C PF12696.2 128 1.3e-06 21.3 0.2 1 1 2.8e-08 2.9e-06 20.1 0.2 1 88 437 524 437 554 0.82 # 32784 # 35075 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 1_9 - 209 AAA_31 PF13614.1 157 4.4e-06 19.6 0.0 1 2 2.5e-07 2.6e-05 17.1 0.0 2 42 2 42 1 55 0.88 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_9 - 209 AAA_31 PF13614.1 157 4.4e-06 19.6 0.0 2 2 0.055 5.6 -0.2 0.0 109 127 68 86 62 113 0.68 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_17 - 228 Methyltransf_26 PF13659.1 117 8.8e-12 38.1 0.0 1 2 1.5e-07 1.5e-05 17.9 0.0 57 114 7 71 2 74 0.72 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_17 - 228 Methyltransf_26 PF13659.1 117 8.8e-12 38.1 0.0 2 2 1.3e-07 1.3e-05 18.1 0.0 4 44 167 206 164 221 0.82 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_92 - 518 AAA_30 PF13604.1 196 0.00018 14.0 0.0 1 1 3.2e-06 0.00033 13.2 0.0 4 44 211 251 209 280 0.86 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_81 - 202 DNA_pol3_delta PF06144.8 172 2.3e-06 20.1 0.0 1 1 3.3e-08 3.3e-06 19.6 0.0 35 99 92 152 74 179 0.80 # 66421 # 67026 # -1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.403 1_92 - 518 ABC_tran PF00005.22 137 8.6e-05 15.8 0.0 1 1 4.4e-06 0.00022 14.5 0.0 12 40 226 255 216 298 0.81 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_74 - 383 ABC_tran PF00005.22 137 0.00011 15.4 0.0 1 1 4.3e-06 0.00022 14.5 0.0 16 35 162 181 152 211 0.87 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_17 - 228 Cons_hypoth95 PF03602.10 183 1.3e-05 17.6 0.0 1 2 0.00039 0.04 6.2 0.0 112 146 18 54 9 81 0.65 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_17 - 228 Cons_hypoth95 PF03602.10 183 1.3e-05 17.6 0.0 2 2 3.9e-05 0.004 9.5 0.0 41 62 162 183 145 219 0.78 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_92 - 518 DAP3 PF10236.4 309 0.00064 11.6 0.0 1 1 1.2e-05 0.0012 10.7 0.0 21 42 223 244 214 253 0.86 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_92 - 518 AAA_19 PF13245.1 76 9.9e-05 15.0 0.0 1 1 5.3e-06 0.00027 13.6 0.0 10 46 226 259 218 270 0.79 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_9 - 209 AAA_19 PF13245.1 76 0.0003 13.5 0.1 1 2 0.00019 0.0098 8.6 0.0 20 48 11 35 9 44 0.84 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_9 - 209 AAA_19 PF13245.1 76 0.0003 13.5 0.1 2 2 0.021 1.1 2.1 0.0 42 63 135 158 118 184 0.76 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_60 - 480 AAA_10 PF12846.2 304 3.4e-19 62.3 0.0 1 1 3.2e-20 5.5e-19 61.6 0.0 8 207 160 442 156 462 0.83 # 47032 # 48471 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.507 1_59 - 92 AAA_10 PF12846.2 304 8.5e-10 31.4 0.0 1 1 5.3e-11 9.1e-10 31.3 0.0 220 300 14 89 4 91 0.92 # 46803 # 47078 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.464 1_43 - 764 AAA_10 PF12846.2 304 2.4e-05 16.8 1.0 1 1 4.4e-06 7.4e-05 15.2 0.9 2 287 137 501 136 514 0.62 # 32784 # 35075 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 1_9 - 209 AAA_10 PF12846.2 304 0.00016 14.1 0.0 1 1 1.5e-05 0.00026 13.4 0.0 11 39 11 39 3 66 0.90 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_92 - 518 AAA_10 PF12846.2 304 0.00022 13.6 0.0 1 1 2.5e-05 0.00043 12.7 0.0 4 30 228 256 226 304 0.78 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_74 - 383 AAA_10 PF12846.2 304 0.00052 12.4 0.0 1 1 6e-05 0.001 11.4 0.0 2 21 158 177 157 196 0.83 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_59 - 92 RNA_pol_Rpb2_3 PF04565.11 68 0.00067 12.4 0.0 1 1 9e-06 0.00091 12.0 0.0 10 41 21 56 6 58 0.90 # 46803 # 47078 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.464 1_39 - 283 Methyltransf_27 PF13708.1 194 1.7e-66 216.4 0.0 1 1 2.3e-68 2.3e-66 215.9 0.0 2 194 85 278 84 278 0.96 # 28202 # 29050 # 1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.496 1_43 - 764 TrwB_AAD_bind PF10412.4 386 4.1e-07 21.8 0.3 1 2 9.3e-05 0.0095 7.4 0.0 11 32 132 153 126 157 0.84 # 32784 # 35075 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 1_43 - 764 TrwB_AAD_bind PF10412.4 386 4.1e-07 21.8 0.3 2 2 5.3e-06 0.00054 11.5 0.1 247 332 440 525 427 555 0.88 # 32784 # 35075 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 1_17 - 228 MethyltransfD12 PF02086.10 260 0.00044 12.6 0.0 1 2 0.015 1.6 1.0 0.0 175 188 18 31 8 92 0.82 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_17 - 228 MethyltransfD12 PF02086.10 260 0.00044 12.6 0.0 2 2 4e-05 0.0041 9.5 0.0 20 46 163 189 148 197 0.78 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_74 - 383 RNA_helicase PF00910.17 107 9.8e-05 15.5 0.0 1 1 1.9e-06 0.00019 14.5 0.0 2 28 161 187 160 205 0.83 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_9 - 209 AAA_25 PF13481.1 194 0.00012 14.4 0.1 1 1 9.3e-06 0.00032 13.1 0.0 42 87 10 44 3 90 0.78 # 7417 # 8043 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_74 - 383 AAA_25 PF13481.1 194 0.0002 13.7 0.0 1 1 1.1e-05 0.00036 12.9 0.0 24 58 148 182 124 207 0.78 # 60353 # 61501 # -1 # ID=1_74;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.513 1_92 - 518 AAA_25 PF13481.1 194 0.0003 13.2 0.0 1 2 0.00011 0.0038 9.5 0.0 19 65 211 260 200 270 0.72 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_92 - 518 AAA_25 PF13481.1 194 0.0003 13.2 0.0 2 2 0.069 2.4 0.4 0.0 153 190 297 337 292 340 0.73 # 75971 # 77524 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470 1_17 - 228 Methyltransf_15 PF09445.5 164 0.00084 11.8 0.0 1 2 0.042 4.3 -0.2 0.0 53 79 4 29 2 33 0.90 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 1_17 - 228 Methyltransf_15 PF09445.5 164 0.00084 11.8 0.0 2 2 4.7e-05 0.0048 9.4 0.0 3 31 166 194 164 206 0.87 # 14052 # 14735 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/bb856292-a053-4bb7-8ae6-f0b58105fca7 # Target file: checkm_output/bins/pm1045/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1045/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/bb856292-a053-4bb7-8ae6-f0b58105fca7 checkm_output/bins/pm1045/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:52:45 2020 # [ok]